RNA–Protein interactions for RNA: ENST00000514537.5

CLDND1-230, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 1,013 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-230ENST00000514537 CLPSL2Q6UWE3 100 aa15.05■□□□□ -0
CLDND1-230ENST00000514537 C20orf203Q8NBC4 194 aa15.05■□□□□ -0
CLDND1-230ENST00000514537 DEFB104AQ8WTQ1 72 aa15.05■□□□□ -0
CLDND1-230ENST00000514537 ZNF727A8MUV8 499 aa15.04■□□□□ -0
CLDND1-230ENST00000514537 FAM229AH3BQW9 127 aa15.04■□□□□ -0
CLDND1-230ENST00000514537 INAFM2P0DMQ5 153 aa15.04■□□□□ -0
CLDND1-230ENST00000514537 COTL1Q14019 142 aa15.04■□□□□ -0
CLDND1-230ENST00000514537 HLA-DQA1P01909 254 aa15.03■□□□□ -0
CLDND1-230ENST00000514537 REG3AQ06141 175 aa15.03■□□□□ -0
CLDND1-230ENST00000514537 SRRM2Q9UQ35 2752 aaKnown RBP15.02■□□□□ -0
CLDND1-230ENST00000514537 IGLV4-60A0A075B6I1 120 aa15.02■□□□□ -0
CLDND1-230ENST00000514537 USP17L23D6RBM5 183 aa15.02■□□□□ -0
CLDND1-230ENST00000514537 TEX261Q6UWH6 196 aa15.02■□□□□ -0
CLDND1-230ENST00000514537 TSKUQ8WUA8 353 aa15.02■□□□□ -0
CLDND1-230ENST00000514537 RPL39LQ96EH5 51 aaKnown RBP15.02■□□□□ -0
CLDND1-230ENST00000514537 OSTCQ9NRP0 149 aa15.02■□□□□ -0
CLDND1-230ENST00000514537 AMTP48728 403 aa15.01□□□□□ -0.01
CLDND1-230ENST00000514537 GFRA4Q9GZZ7 299 aa15.01□□□□□ -0.01
CLDND1-230ENST00000514537 FAM231BA6NCW3 169 aa15□□□□□ -0.01
CLDND1-230ENST00000514537 HIGD1CA8MV81 97 aa15□□□□□ -0.01
CLDND1-230ENST00000514537 UBE2L6O14933 153 aa15□□□□□ -0.01
CLDND1-230ENST00000514537 BORCS7Q96B45 105 aa14.99□□□□□ -0.01
CLDND1-230ENST00000514537 TRAV8-4A0A0B4J246 113 aa14.98□□□□□ -0.01
CLDND1-230ENST00000514537 A0A1B0GUT8 65 aa14.98□□□□□ -0.01
CLDND1-230ENST00000514537 PRSS1P07477 247 aa14.98□□□□□ -0.01
CLDND1-230ENST00000514537 IGLV10-54A0A075B6I4 117 aa14.97□□□□□ -0.01
CLDND1-230ENST00000514537 NCR2O95944 276 aa14.97□□□□□ -0.01
CLDND1-230ENST00000514537 FAM74A3Q4VXF1 159 aa14.97□□□□□ -0.01
CLDND1-230ENST00000514537 MYCBP2O75592 4640 aa14.97□□□□□ -0.01
CLDND1-230ENST00000514537 SDHAF1A6NFY7 115 aa14.96□□□□□ -0.01
CLDND1-230ENST00000514537 TMEM241Q24JQ0 296 aa14.96□□□□□ -0.01
CLDND1-230ENST00000514537 TMEM191AQ9H0A3 160 aa14.96□□□□□ -0.01
CLDND1-230ENST00000514537 V9GYV3 84 aa14.96□□□□□ -0.01
CLDND1-230ENST00000514537 TRBV6-5A0A0K0K1A5 114 aa14.95□□□□□ -0.02
CLDND1-230ENST00000514537 C9JQL5 133 aa14.95□□□□□ -0.02
CLDND1-230ENST00000514537 DGAT2L7PQ6IED9 249 aa14.95□□□□□ -0.02
CLDND1-230ENST00000514537 SCXQ7RTU7 201 aa14.95□□□□□ -0.02
CLDND1-230ENST00000514537 ISOC2Q96AB3 205 aa14.95□□□□□ -0.02
CLDND1-230ENST00000514537 HERC1Q15751 4861 aa14.94□□□□□ -0.02
CLDND1-230ENST00000514537 RPL23P62829 140 aaKnown RBP14.94□□□□□ -0.02
CLDND1-230ENST00000514537 CHAC1Q9BUX1 264 aa14.94□□□□□ -0.02
CLDND1-230ENST00000514537 GAS8-AS1O95177 125 aa14.93□□□□□ -0.02
CLDND1-230ENST00000514537 CLRN3Q8NCR9 226 aa14.93□□□□□ -0.02
CLDND1-230ENST00000514537 RNF185Q96GF1 192 aa14.93□□□□□ -0.02
CLDND1-230ENST00000514537 H7C423 109 aa14.92□□□□□ -0.02
CLDND1-230ENST00000514537 I3L3M4 83 aa14.92□□□□□ -0.02
CLDND1-230ENST00000514537 APCSP02743 223 aa14.92□□□□□ -0.02
CLDND1-230ENST00000514537 RAB4AP20338 218 aa14.92□□□□□ -0.02
CLDND1-230ENST00000514537 SRSF3P84103 164 aaKnown RBP14.92□□□□□ -0.02
CLDND1-230ENST00000514537 LINC00528Q8N1L1 170 aa14.92□□□□□ -0.02
CLDND1-230ENST00000514537 NUP35Q8NFH5 326 aa14.92□□□□□ -0.02
CLDND1-230ENST00000514537 FLG2Q5D862 2391 aaPredicted RBP14.92□□□□□ -0.02
CLDND1-230ENST00000514537 PMCHP20382 165 aa14.91□□□□□ -0.02
CLDND1-230ENST00000514537 PEA15Q15121 130 aa14.91□□□□□ -0.02
CLDND1-230ENST00000514537 SMDT1Q9H4I9 107 aa14.91□□□□□ -0.02
CLDND1-230ENST00000514537 NAT8Q9UHE5 227 aa14.91□□□□□ -0.02
CLDND1-230ENST00000514537 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.9□□□□□ -0.02
CLDND1-230ENST00000514537 IGKV2-29A2NJV5 120 aaPredicted RBP14.9□□□□□ -0.02
CLDND1-230ENST00000514537 RIGQ13278 110 aa14.9□□□□□ -0.02
CLDND1-230ENST00000514537 AMMECR1LQ6DCA0 310 aa14.9□□□□□ -0.02
CLDND1-230ENST00000514537 C9orf163Q8N9P6 203 aa14.9□□□□□ -0.02
CLDND1-230ENST00000514537 CIRBP-AS1Q8TBR5 109 aa14.9□□□□□ -0.02
CLDND1-230ENST00000514537 ST20Q9HBF5 79 aa14.9□□□□□ -0.02
CLDND1-230ENST00000514537 PLA2G1BP04054 148 aaKnown RBP14.89□□□□□ -0.03
CLDND1-230ENST00000514537 ADIRFQ15847 76 aa14.89□□□□□ -0.03
CLDND1-230ENST00000514537 AMN1Q8IY45 258 aa14.89□□□□□ -0.03
CLDND1-230ENST00000514537 MRAP2Q96G30 205 aa14.89□□□□□ -0.03
CLDND1-230ENST00000514537 FGF6P10767 208 aa14.88□□□□□ -0.03
CLDND1-230ENST00000514537 RPS10P46783 165 aaKnown RBP14.88□□□□□ -0.03
CLDND1-230ENST00000514537 POLR2KP53803 58 aaKnown RBP14.88□□□□□ -0.03
CLDND1-230ENST00000514537 RNASEKQ6P5S7 137 aaKnown RBP14.88□□□□□ -0.03
CLDND1-230ENST00000514537 NAT8BQ9UHF3 227 aa14.88□□□□□ -0.03
CLDND1-230ENST00000514537 TSHBP01222 138 aa14.87□□□□□ -0.03
CLDND1-230ENST00000514537 ESDP10768 282 aa14.86□□□□□ -0.03
CLDND1-230ENST00000514537 CNBPP62633 177 aaKnown RBP14.86□□□□□ -0.03
CLDND1-230ENST00000514537 DMBT1Q9UGM3 2413 aaPredicted RBP14.85□□□□□ -0.03
CLDND1-230ENST00000514537 IGKV3OR2-268A0A0C4DH90 116 aa14.85□□□□□ -0.03
CLDND1-230ENST00000514537 TRBV27A0A0K0K1C4 114 aa14.85□□□□□ -0.03
CLDND1-230ENST00000514537 SMIM27A0A1W2PRY6 76 aa14.85□□□□□ -0.03
CLDND1-230ENST00000514537 hDV102S1A0JD36 115 aa14.85□□□□□ -0.03
CLDND1-230ENST00000514537 TMEM242Q9NWH2 141 aa14.85□□□□□ -0.03
CLDND1-230ENST00000514537 GAGE12HA6NDE8 117 aa14.84□□□□□ -0.03
CLDND1-230ENST00000514537 ZNF25P17030 456 aaPredicted RBP14.84□□□□□ -0.03
CLDND1-230ENST00000514537 SDIM1Q6ZPB5 146 aa14.84□□□□□ -0.03
CLDND1-230ENST00000514537 SMKR1H3BMG3 65 aa14.82□□□□□ -0.04
CLDND1-230ENST00000514537 SLPIP03973 132 aa14.82□□□□□ -0.04
CLDND1-230ENST00000514537 CHCHD10Q8WYQ3 142 aaPredicted RBP14.82□□□□□ -0.04
CLDND1-230ENST00000514537 PPP1R17O96001 155 aa14.81□□□□□ -0.04
CLDND1-230ENST00000514537 FAM104BQ5XKR9 115 aa14.81□□□□□ -0.04
CLDND1-230ENST00000514537 CFAP161Q6P656 301 aa14.81□□□□□ -0.04
CLDND1-230ENST00000514537 NRACQ8N912 160 aa14.81□□□□□ -0.04
CLDND1-230ENST00000514537 OR5A1Q8NGJ0 315 aa14.81□□□□□ -0.04
CLDND1-230ENST00000514537 TMEM101Q96IK0 257 aa14.81□□□□□ -0.04
CLDND1-230ENST00000514537 BTF3L4Q96K17 158 aa14.81□□□□□ -0.04
CLDND1-230ENST00000514537 AP5S1Q9NUS5 200 aa14.81□□□□□ -0.04
CLDND1-230ENST00000514537 VCYO14598 125 aa14.8□□□□□ -0.04
CLDND1-230ENST00000514537 C15orf56Q8N910 161 aa14.8□□□□□ -0.04
CLDND1-230ENST00000514537 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.8□□□□□ -0.04
CLDND1-230ENST00000514537 MRPL52Q86TS9 123 aaKnown RBP14.79□□□□□ -0.04
CLDND1-230ENST00000514537 A0A1B0GW15 77 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms