RNA–Protein interactions for RNA: ENST00000514493.5

SSBP2-218, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SSBP2, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-218ENST00000514493 H0Y8G0 127 aa13.9□□□□□ -0.18
SSBP2-218ENST00000514493 LINC01549A6NIU2 74 aa13.89□□□□□ -0.19
SSBP2-218ENST00000514493 ATP5G1P05496 136 aa13.89□□□□□ -0.19
SSBP2-218ENST00000514493 CYSLTR1Q9Y271 337 aa13.89□□□□□ -0.19
SSBP2-218ENST00000514493 DEFB104AQ8WTQ1 72 aa13.88□□□□□ -0.19
SSBP2-218ENST00000514493 TRBV7-3A0A075B6L6 115 aa13.88□□□□□ -0.19
SSBP2-218ENST00000514493 RPL36AP83881 106 aaKnown RBP13.88□□□□□ -0.19
SSBP2-218ENST00000514493 C12orf74Q32Q52 190 aa13.88□□□□□ -0.19
SSBP2-218ENST00000514493 LINC01545Q5VT33 79 aa13.88□□□□□ -0.19
SSBP2-218ENST00000514493 RPL36ALQ969Q0 106 aaKnown RBP13.88□□□□□ -0.19
SSBP2-218ENST00000514493 ZNRF2Q8NHG8 242 aa13.87□□□□□ -0.19
SSBP2-218ENST00000514493 SCGB3A1Q96QR1 104 aa13.86□□□□□ -0.19
SSBP2-218ENST00000514493 PRADC1Q9BSG0 188 aa13.86□□□□□ -0.19
SSBP2-218ENST00000514493 HHLA3Q9XRX5 114 aa13.86□□□□□ -0.19
SSBP2-218ENST00000514493 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.86□□□□□ -0.19
SSBP2-218ENST00000514493 CRYBA4P53673 196 aa13.86□□□□□ -0.19
SSBP2-218ENST00000514493 LGALS9CQ6DKI2 356 aa13.86□□□□□ -0.19
SSBP2-218ENST00000514493 PRO0255Q9UI72 69 aa13.86□□□□□ -0.19
SSBP2-218ENST00000514493 VAMP8Q9BV40 100 aa13.85□□□□□ -0.19
SSBP2-218ENST00000514493 ERASQ7Z444 233 aa13.84□□□□□ -0.19
SSBP2-218ENST00000514493 C20orf203Q8NBC4 194 aa13.84□□□□□ -0.19
SSBP2-218ENST00000514493 COL7A1Q02388 2944 aa13.84□□□□□ -0.19
SSBP2-218ENST00000514493 STAB2Q8WWQ8 2551 aa13.84□□□□□ -0.19
SSBP2-218ENST00000514493 LOC100131303A0A0U1RQF7 123 aa13.83□□□□□ -0.19
SSBP2-218ENST00000514493 UBE2D3P61077 147 aa13.83□□□□□ -0.19
SSBP2-218ENST00000514493 UBE2D2P62837 147 aa13.83□□□□□ -0.19
SSBP2-218ENST00000514493 RPL39P62891 51 aaKnown RBP13.83□□□□□ -0.19
SSBP2-218ENST00000514493 COTL1Q14019 142 aa13.83□□□□□ -0.19
SSBP2-218ENST00000514493 ATOH7Q8N100 152 aa13.83□□□□□ -0.19
SSBP2-218ENST00000514493 PHLDA1Q8WV24 401 aaPredicted RBP13.83□□□□□ -0.19
SSBP2-218ENST00000514493 IGHV3-38A0A0C4DH36 116 aa13.83□□□□□ -0.2
SSBP2-218ENST00000514493 GAGE12JA6NER3 117 aa13.83□□□□□ -0.2
SSBP2-218ENST00000514493 PRSS1P07477 247 aa13.83□□□□□ -0.2
SSBP2-218ENST00000514493 LINC00694P0DN24 101 aa13.83□□□□□ -0.2
SSBP2-218ENST00000514493 GAGE1Q13065 139 aa13.83□□□□□ -0.2
SSBP2-218ENST00000514493 GAGE4Q13068 117 aa13.83□□□□□ -0.2
SSBP2-218ENST00000514493 GAGE5Q13069 117 aa13.83□□□□□ -0.2
SSBP2-218ENST00000514493 GAGE13Q4V321 117 aa13.83□□□□□ -0.2
SSBP2-218ENST00000514493 Q6ZN92 141 aa13.83□□□□□ -0.2
SSBP2-218ENST00000514493 DAZ4Q86SG3 579 aaKnown RBP13.83□□□□□ -0.2
SSBP2-218ENST00000514493 C11orf45Q8TAV5 145 aa13.83□□□□□ -0.2
SSBP2-218ENST00000514493 DAZ3Q9NR90 486 aaKnown RBP13.83□□□□□ -0.2
SSBP2-218ENST00000514493 F5H768 121 aa13.82□□□□□ -0.2
SSBP2-218ENST00000514493 Q6ZTC4 211 aa13.82□□□□□ -0.2
SSBP2-218ENST00000514493 ZNF664Q8N3J9 261 aa13.82□□□□□ -0.2
SSBP2-218ENST00000514493 TIMM17AQ99595 171 aa13.82□□□□□ -0.2
SSBP2-218ENST00000514493 PMCHL2Q9BQD1 86 aa13.82□□□□□ -0.2
SSBP2-218ENST00000514493 IGIPA6NJ69 53 aa13.81□□□□□ -0.2
SSBP2-218ENST00000514493 HTN3P15516 51 aa13.81□□□□□ -0.2
SSBP2-218ENST00000514493 PAX4O43316 350 aa13.81□□□□□ -0.2
SSBP2-218ENST00000514493 ODF1Q14990 250 aa13.81□□□□□ -0.2
SSBP2-218ENST00000514493 TMEM141Q96I45 108 aa13.81□□□□□ -0.2
SSBP2-218ENST00000514493 PAM16Q9Y3D7 125 aa13.81□□□□□ -0.2
SSBP2-218ENST00000514493 NHLRC4P0CG21 123 aaPredicted RBP13.8□□□□□ -0.2
SSBP2-218ENST00000514493 GYPEP15421 78 aa13.8□□□□□ -0.2
SSBP2-218ENST00000514493 NANOS2P60321 138 aaKnown RBP13.8□□□□□ -0.2
SSBP2-218ENST00000514493 TGP01266 2768 aa13.8□□□□□ -0.2
SSBP2-218ENST00000514493 TRAV9-2A0A087WT02 112 aa13.79□□□□□ -0.2
SSBP2-218ENST00000514493 PCP4L1A6NKN8 68 aa13.79□□□□□ -0.2
SSBP2-218ENST00000514493 PKIAP61925 76 aa13.79□□□□□ -0.2
SSBP2-218ENST00000514493 VSIG2Q96IQ7 327 aa13.79□□□□□ -0.2
SSBP2-218ENST00000514493 CHCHD7Q9BUK0 85 aa13.79□□□□□ -0.2
SSBP2-218ENST00000514493 TRAV12-1A0A0B4J245 112 aa13.78□□□□□ -0.2
SSBP2-218ENST00000514493 TSTD3H0UI37 97 aa13.78□□□□□ -0.2
SSBP2-218ENST00000514493 BAALCQ8WXS3 180 aa13.78□□□□□ -0.2
SSBP2-218ENST00000514493 TRAV26-1A0A087WT03 109 aa13.78□□□□□ -0.2
SSBP2-218ENST00000514493 A0A0J9YY99 117 aa13.77□□□□□ -0.21
SSBP2-218ENST00000514493 PRO1933Q9H354 126 aa13.77□□□□□ -0.21
SSBP2-218ENST00000514493 A0A087WX48 190 aa13.76□□□□□ -0.21
SSBP2-218ENST00000514493 MAJINQ3KP22 176 aa13.76□□□□□ -0.21
SSBP2-218ENST00000514493 SPATA45Q537H7 98 aa13.76□□□□□ -0.21
SSBP2-218ENST00000514493 GTSF1LQ9H1H1 148 aa13.76□□□□□ -0.21
SSBP2-218ENST00000514493 PYGO1Q9Y3Y4 419 aa13.76□□□□□ -0.21
SSBP2-218ENST00000514493 HSBP1L1C9JCN9 74 aa13.74□□□□□ -0.21
SSBP2-218ENST00000514493 NTM-AS1Q6ZSK4 140 aa13.74□□□□□ -0.21
SSBP2-218ENST00000514493 MRPL35Q9NZE8 188 aaKnown RBP13.74□□□□□ -0.21
SSBP2-218ENST00000514493 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.73□□□□□ -0.21
SSBP2-218ENST00000514493 hDV102S1A0JD36 115 aa13.73□□□□□ -0.21
SSBP2-218ENST00000514493 IGKV2-29A2NJV5 120 aaPredicted RBP13.73□□□□□ -0.21
SSBP2-218ENST00000514493 F8VRH5 84 aa13.73□□□□□ -0.21
SSBP2-218ENST00000514493 SPANXA1Q9NS26 97 aa13.73□□□□□ -0.21
SSBP2-218ENST00000514493 DEFB131BA0A096LNP1 70 aa13.73□□□□□ -0.21
SSBP2-218ENST00000514493 DPM2O94777 84 aa13.73□□□□□ -0.21
SSBP2-218ENST00000514493 NPSP0C0P6 89 aa13.73□□□□□ -0.21
SSBP2-218ENST00000514493 PMVKQ15126 192 aa13.73□□□□□ -0.21
SSBP2-218ENST00000514493 ATP6V0E2Q8NHE4 81 aa13.73□□□□□ -0.21
SSBP2-218ENST00000514493 PRSS29PA6NIE9 313 aa13.72□□□□□ -0.21
SSBP2-218ENST00000514493 H3BNG1 76 aa13.72□□□□□ -0.21
SSBP2-218ENST00000514493 IGKCP01834 107 aa13.72□□□□□ -0.21
SSBP2-218ENST00000514493 UBE2D4Q9Y2X8 147 aa13.72□□□□□ -0.21
SSBP2-218ENST00000514493 CHTOPQ9Y3Y2 248 aaKnown RBP13.72□□□□□ -0.21
SSBP2-218ENST00000514493 ICOSQ9Y6W8 199 aa13.72□□□□□ -0.21
SSBP2-218ENST00000514493 IGLV4-3A0A075B6K6 122 aa13.71□□□□□ -0.21
SSBP2-218ENST00000514493 TRAV10A0A0B4J240 114 aa13.71□□□□□ -0.21
SSBP2-218ENST00000514493 PLNP26678 52 aa13.71□□□□□ -0.21
SSBP2-218ENST00000514493 PAPPA-AS1Q5QFB9 102 aa13.71□□□□□ -0.21
SSBP2-218ENST00000514493 MRPL23Q16540 153 aaKnown RBP13.71□□□□□ -0.22
SSBP2-218ENST00000514493 TMEM97Q5BJF2 176 aa13.71□□□□□ -0.22
SSBP2-218ENST00000514493 OPRPNQ99935 248 aaPredicted RBP13.7□□□□□ -0.22
SSBP2-218ENST00000514493 CST9LQ9H4G1 147 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms