RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 TRAV9-2A0A087WT02 112 aa5.85□□□□□ -1.47
CCL28-204ENST00000514421 TRGV1A0A0A0MS02 117 aa5.85□□□□□ -1.47
CCL28-204ENST00000514421 TRAV26-2A0A0B4J265 109 aa5.85□□□□□ -1.47
CCL28-204ENST00000514421 LY6G6CO95867 125 aa5.85□□□□□ -1.47
CCL28-204ENST00000514421 POLR2KP53803 58 aaKnown RBP5.85□□□□□ -1.47
CCL28-204ENST00000514421 LAGE3Q14657 143 aa5.85□□□□□ -1.47
CCL28-204ENST00000514421 MRPL52Q86TS9 123 aaKnown RBP5.85□□□□□ -1.47
CCL28-204ENST00000514421 Q8N3U1 123 aa5.85□□□□□ -1.47
CCL28-204ENST00000514421 LINC00476Q8WZB0 136 aa5.85□□□□□ -1.47
CCL28-204ENST00000514421 C18orf15Q96N68 181 aa5.85□□□□□ -1.47
CCL28-204ENST00000514421 NACAE9PAV3 2078 aa5.85□□□□□ -1.47
CCL28-204ENST00000514421 ALMS1Q8TCU4 4167 aa5.85□□□□□ -1.47
CCL28-204ENST00000514421 TRBV27A0A0K0K1C4 114 aa5.84□□□□□ -1.47
CCL28-204ENST00000514421 LINC01549A6NIU2 74 aa5.84□□□□□ -1.47
CCL28-204ENST00000514421 M0QY20 66 aa5.84□□□□□ -1.47
CCL28-204ENST00000514421 M0R2P5 195 aa5.84□□□□□ -1.47
CCL28-204ENST00000514421 SMIM17P0DL12 118 aa5.84□□□□□ -1.47
CCL28-204ENST00000514421 CTAG1AP78358 180 aa5.84□□□□□ -1.47
CCL28-204ENST00000514421 ZNF876PQ49A33 203 aa5.84□□□□□ -1.47
CCL28-204ENST00000514421 ORMDL2Q53FV1 153 aa5.84□□□□□ -1.47
CCL28-204ENST00000514421 IFI27L1Q96BM0 104 aa5.84□□□□□ -1.47
CCL28-204ENST00000514421 MIEN1Q9BRT3 115 aa5.84□□□□□ -1.47
CCL28-204ENST00000514421 PRO1933Q9H354 126 aa5.84□□□□□ -1.47
CCL28-204ENST00000514421 A8MWV9 139 aa5.83□□□□□ -1.48
CCL28-204ENST00000514421 IGLC3P0DOY3 106 aa5.83□□□□□ -1.48
CCL28-204ENST00000514421 SUMO4Q6EEV6 95 aa5.83□□□□□ -1.48
CCL28-204ENST00000514421 C15orf53Q8NAA6 179 aa5.83□□□□□ -1.48
CCL28-204ENST00000514421 RPL39LQ96EH5 51 aaKnown RBP5.83□□□□□ -1.48
CCL28-204ENST00000514421 JPT2Q9H910 190 aa5.83□□□□□ -1.48
CCL28-204ENST00000514421 ST20Q9HBF5 79 aa5.83□□□□□ -1.48
CCL28-204ENST00000514421 MRPL16Q9NX20 251 aaKnown RBP5.83□□□□□ -1.48
CCL28-204ENST00000514421 RYR3Q15413 4870 aa5.83□□□□□ -1.48
CCL28-204ENST00000514421 RYR2Q92736 4967 aa5.83□□□□□ -1.48
CCL28-204ENST00000514421 ATP5LO75964 103 aa5.82□□□□□ -1.48
CCL28-204ENST00000514421 P0DMU3 169 aa5.82□□□□□ -1.48
CCL28-204ENST00000514421 FAM231AP0DMU4 169 aa5.82□□□□□ -1.48
CCL28-204ENST00000514421 FAM231CP0DMU5 169 aa5.82□□□□□ -1.48
CCL28-204ENST00000514421 G0S2P27469 103 aa5.82□□□□□ -1.48
CCL28-204ENST00000514421 SPATA45Q537H7 98 aa5.82□□□□□ -1.48
CCL28-204ENST00000514421 LBHQ53QV2 105 aaPredicted RBP5.82□□□□□ -1.48
CCL28-204ENST00000514421 TOMM6Q96B49 74 aa5.82□□□□□ -1.48
CCL28-204ENST00000514421 C14orf144Q96I85 54 aa5.82□□□□□ -1.48
CCL28-204ENST00000514421 PAM16Q9Y3D7 125 aa5.82□□□□□ -1.48
CCL28-204ENST00000514421 TRAV26-1A0A087WT03 109 aa5.81□□□□□ -1.48
CCL28-204ENST00000514421 A0A087WWL8 130 aa5.81□□□□□ -1.48
CCL28-204ENST00000514421 H3BNG1 76 aa5.81□□□□□ -1.48
CCL28-204ENST00000514421 RHODO00212 210 aa5.81□□□□□ -1.48
CCL28-204ENST00000514421 VCYO14598 125 aa5.81□□□□□ -1.48
CCL28-204ENST00000514421 TCAPO15273 167 aa5.81□□□□□ -1.48
CCL28-204ENST00000514421 MGPP08493 103 aa5.81□□□□□ -1.48
CCL28-204ENST00000514421 ZFP2Q6ZN57 461 aa5.81□□□□□ -1.48
CCL28-204ENST00000514421 LYSTQ99698 3801 aa5.81□□□□□ -1.48
CCL28-204ENST00000514421 UQCR10Q9UDW1 63 aa5.81□□□□□ -1.48
CCL28-204ENST00000514421 TRAV12-1A0A0B4J245 112 aa5.8□□□□□ -1.48
CCL28-204ENST00000514421 A0A0J9YY99 117 aa5.8□□□□□ -1.48
CCL28-204ENST00000514421 H7C1H1 209 aa5.8□□□□□ -1.48
CCL28-204ENST00000514421 RS1O15537 224 aa5.8□□□□□ -1.48
CCL28-204ENST00000514421 CIDEAO60543 219 aa5.8□□□□□ -1.48
CCL28-204ENST00000514421 NUDT3O95989 172 aa5.8□□□□□ -1.48
CCL28-204ENST00000514421 IGHV3-53P01767 116 aa5.8□□□□□ -1.48
CCL28-204ENST00000514421 FHL2Q14192 279 aa5.8□□□□□ -1.48
CCL28-204ENST00000514421 ODF1Q14990 250 aa5.8□□□□□ -1.48
CCL28-204ENST00000514421 CFAP126Q5VTH2 177 aa5.8□□□□□ -1.48
CCL28-204ENST00000514421 OR4C5Q8NGB2 326 aa5.8□□□□□ -1.48
CCL28-204ENST00000514421 PRO0255Q9UI72 69 aa5.8□□□□□ -1.48
CCL28-204ENST00000514421 HHLA3Q9XRX5 114 aa5.8□□□□□ -1.48
CCL28-204ENST00000514421 TRAV4A0A0B4J268 109 aa5.79□□□□□ -1.48
CCL28-204ENST00000514421 TRGV4A0A0C4DH28 118 aa5.79□□□□□ -1.48
CCL28-204ENST00000514421 SDHAF1A6NFY7 115 aa5.79□□□□□ -1.48
CCL28-204ENST00000514421 PAX4O43316 350 aa5.79□□□□□ -1.48
CCL28-204ENST00000514421 RHOHQ15669 191 aa5.79□□□□□ -1.48
CCL28-204ENST00000514421 MAJINQ3KP22 176 aa5.79□□□□□ -1.48
CCL28-204ENST00000514421 ERASQ7Z444 233 aa5.79□□□□□ -1.48
CCL28-204ENST00000514421 ATOH7Q8N100 152 aa5.79□□□□□ -1.48
CCL28-204ENST00000514421 VSIG2Q96IQ7 327 aa5.79□□□□□ -1.48
CCL28-204ENST00000514421 ZNF479Q96JC4 524 aa5.79□□□□□ -1.48
CCL28-204ENST00000514421 MRPS16Q9Y3D3 137 aaKnown RBP5.79□□□□□ -1.48
CCL28-204ENST00000514421 HYDINQ4G0P3 5121 aa5.78□□□□□ -1.48
CCL28-204ENST00000514421 IGIPA6NJ69 53 aa5.78□□□□□ -1.48
CCL28-204ENST00000514421 F5H697 171 aa5.78□□□□□ -1.48
CCL28-204ENST00000514421 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.78□□□□□ -1.48
CCL28-204ENST00000514421 CRYBA4P53673 196 aa5.78□□□□□ -1.48
CCL28-204ENST00000514421 CCL18P55774 89 aa5.78□□□□□ -1.48
CCL28-204ENST00000514421 KMT2AQ03164 3969 aa5.78□□□□□ -1.48
CCL28-204ENST00000514421 ZNF56Q15929 161 aa5.78□□□□□ -1.48
CCL28-204ENST00000514421 LCE3BQ5TA77 95 aa5.78□□□□□ -1.48
CCL28-204ENST00000514421 UBE2DNLQ8IWF7 75 aa5.78□□□□□ -1.48
CCL28-204ENST00000514421 DNAJC30Q96LL9 226 aa5.78□□□□□ -1.48
CCL28-204ENST00000514421 KIR2DL4Q99706 377 aa5.78□□□□□ -1.48
CCL28-204ENST00000514421 DNAH6Q9C0G6 4158 aa5.77□□□□□ -1.48
CCL28-204ENST00000514421 A0A087WX48 190 aa5.77□□□□□ -1.49
CCL28-204ENST00000514421 hDV102S1A0JD36 115 aa5.77□□□□□ -1.49
CCL28-204ENST00000514421 HSBP1L1C9JCN9 74 aa5.77□□□□□ -1.49
CCL28-204ENST00000514421 I3L3M4 83 aa5.77□□□□□ -1.49
CCL28-204ENST00000514421 DLEU1O43261 78 aa5.77□□□□□ -1.49
CCL28-204ENST00000514421 TSHBP01222 138 aa5.77□□□□□ -1.49
CCL28-204ENST00000514421 NPSP0C0P6 89 aa5.77□□□□□ -1.49
CCL28-204ENST00000514421 MRPL23Q16540 153 aaKnown RBP5.77□□□□□ -1.49
CCL28-204ENST00000514421 FAM74A4Q5TZK3 123 aa5.77□□□□□ -1.49
CCL28-204ENST00000514421 C2orf66Q6UXQ4 117 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms