RNA–Protein interactions for RNA: ENST00000513326.5

HTT-211, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-211ENST00000513326 IFNA7P01567 189 aa2.81□□□□□ -1.96
HTT-211ENST00000513326 DEFA3P59666 94 aa2.81□□□□□ -1.96
HTT-211ENST00000513326 KRTAP10-6P60371 365 aaPredicted RBP2.81□□□□□ -1.96
HTT-211ENST00000513326 S100A10P60903 97 aa2.81□□□□□ -1.96
HTT-211ENST00000513326 CXCL6P80162 114 aa2.81□□□□□ -1.96
HTT-211ENST00000513326 C1orf137Q5JT78 98 aa2.81□□□□□ -1.96
HTT-211ENST00000513326 SPANXN2Q5MJ10 180 aa2.81□□□□□ -1.96
HTT-211ENST00000513326 TMEM252Q8N6L7 170 aa2.81□□□□□ -1.96
HTT-211ENST00000513326 SUN5Q8TC36 379 aa2.81□□□□□ -1.96
HTT-211ENST00000513326 OTORQ9NRC9 128 aa2.81□□□□□ -1.96
HTT-211ENST00000513326 PIGBOS1A0A0B4J2F0 54 aa2.8□□□□□ -1.96
HTT-211ENST00000513326 TRBV10-1A0A0K0K1A3 114 aa2.8□□□□□ -1.96
HTT-211ENST00000513326 FAM74A7A6NL05 159 aa2.8□□□□□ -1.96
HTT-211ENST00000513326 M0R036 132 aa2.8□□□□□ -1.96
HTT-211ENST00000513326 M0R381 172 aa2.8□□□□□ -1.96
HTT-211ENST00000513326 HMGB3O15347 200 aaKnown RBP2.8□□□□□ -1.96
HTT-211ENST00000513326 ARMS2P0C7Q2 107 aa2.8□□□□□ -1.96
HTT-211ENST00000513326 SULT1A1P50225 295 aa2.8□□□□□ -1.96
HTT-211ENST00000513326 CRIP1P50238 77 aa2.8□□□□□ -1.96
HTT-211ENST00000513326 FAM74A3Q4VXF1 159 aa2.8□□□□□ -1.96
HTT-211ENST00000513326 PHF5AQ7RTV0 110 aaKnown RBP2.8□□□□□ -1.96
HTT-211ENST00000513326 PRNTQ86SH4 94 aa2.8□□□□□ -1.96
HTT-211ENST00000513326 CMTM2Q8TAZ6 248 aa2.8□□□□□ -1.96
HTT-211ENST00000513326 SFRP2Q96HF1 295 aa2.8□□□□□ -1.96
HTT-211ENST00000513326 SLC25A21Q9BQT8 299 aaPredicted RBP2.8□□□□□ -1.96
HTT-211ENST00000513326 Q9H521 79 aa2.8□□□□□ -1.96
HTT-211ENST00000513326 LYRM2Q9NU23 88 aaPredicted RBP2.8□□□□□ -1.96
HTT-211ENST00000513326 RABL2AQ9UBK7 228 aaPredicted RBP2.8□□□□□ -1.96
HTT-211ENST00000513326 PSG8Q9UQ74 426 aa2.8□□□□□ -1.96
HTT-211ENST00000513326 V9GYH0 126 aa2.8□□□□□ -1.96
HTT-211ENST00000513326 IGLV1-50A0A075B6I6 118 aa2.79□□□□□ -1.96
HTT-211ENST00000513326 A0A087WXM4 84 aa2.79□□□□□ -1.96
HTT-211ENST00000513326 TMSB15BA0A087X1C1 80 aa2.79□□□□□ -1.96
HTT-211ENST00000513326 GVQW2A0A096LPI5 108 aaPredicted RBP2.79□□□□□ -1.96
HTT-211ENST00000513326 IGKV3OR2-268A0A0C4DH90 116 aa2.79□□□□□ -1.96
HTT-211ENST00000513326 MUC21A0A140T8X8 626 aa2.79□□□□□ -1.96
HTT-211ENST00000513326 FAM25EA8MYX2 175 aa2.79□□□□□ -1.96
HTT-211ENST00000513326 H0Y9J4 135 aa2.79□□□□□ -1.96
HTT-211ENST00000513326 ATP6V1G2O95670 118 aa2.79□□□□□ -1.96
HTT-211ENST00000513326 MT-ND6P03923 174 aa2.79□□□□□ -1.96
HTT-211ENST00000513326 IGLV7-43P04211 117 aa2.79□□□□□ -1.96
HTT-211ENST00000513326 TCRAP04437 139 aa2.79□□□□□ -1.96
HTT-211ENST00000513326 S100A4P26447 101 aaKnown RBP2.79□□□□□ -1.96
HTT-211ENST00000513326 S100A11P31949 105 aa2.79□□□□□ -1.96
HTT-211ENST00000513326 BTCP35070 178 aa2.79□□□□□ -1.96
HTT-211ENST00000513326 TOMM5Q8N4H5 51 aa2.79□□□□□ -1.96
HTT-211ENST00000513326 DERL1Q9BUN8 251 aa2.79□□□□□ -1.96
HTT-211ENST00000513326 ZNF471Q9BX82 626 aaPredicted RBP2.79□□□□□ -1.96
HTT-211ENST00000513326 IL36BQ9NZH7 164 aa2.79□□□□□ -1.96
HTT-211ENST00000513326 OR5AC2Q9NZP5 309 aa2.79□□□□□ -1.96
HTT-211ENST00000513326 RSL24D1Q9UHA3 163 aaKnown RBP2.79□□□□□ -1.96
HTT-211ENST00000513326 TRBV6-1A0A0K0K1D8 114 aa2.78□□□□□ -1.96
HTT-211ENST00000513326 B4DEV8 164 aa2.78□□□□□ -1.96
HTT-211ENST00000513326 KRBOX1C9JBD0 128 aa2.78□□□□□ -1.96
HTT-211ENST00000513326 E9PLD3 99 aa2.78□□□□□ -1.96
HTT-211ENST00000513326 NDUFB6O95139 128 aa2.78□□□□□ -1.96
HTT-211ENST00000513326 BCL2P10415 239 aa2.78□□□□□ -1.96
HTT-211ENST00000513326 FAUP35544 74 aaKnown RBP2.78□□□□□ -1.96
HTT-211ENST00000513326 RAB2AP61019 212 aa2.78□□□□□ -1.96
HTT-211ENST00000513326 FLI1Q01543 452 aaPredicted RBP2.78□□□□□ -1.96
HTT-211ENST00000513326 IL15RAQ13261 267 aa2.78□□□□□ -1.96
HTT-211ENST00000513326 ZNF56Q15929 161 aa2.78□□□□□ -1.96
HTT-211ENST00000513326 IQCJQ1A5X6 159 aa2.78□□□□□ -1.96
HTT-211ENST00000513326 SMUG1Q53HV7 270 aa2.78□□□□□ -1.96
HTT-211ENST00000513326 PYDC2Q56P42 97 aa2.78□□□□□ -1.96
HTT-211ENST00000513326 KHDC3LQ587J8 217 aa2.78□□□□□ -1.96
HTT-211ENST00000513326 ARL6IP6Q8N6S5 226 aa2.78□□□□□ -1.96
HTT-211ENST00000513326 FER1L6-AS1Q8NA97 138 aa2.78□□□□□ -1.96
HTT-211ENST00000513326 OR5C1Q8NGR4 320 aa2.78□□□□□ -1.96
HTT-211ENST00000513326 MITD1Q8WV92 249 aa2.78□□□□□ -1.96
HTT-211ENST00000513326 DIRC1Q969H9 104 aa2.78□□□□□ -1.96
HTT-211ENST00000513326 SDHCQ99643 169 aaPredicted RBP2.78□□□□□ -1.96
HTT-211ENST00000513326 NDFIP1Q9BT67 221 aa2.78□□□□□ -1.96
HTT-211ENST00000513326 WDR61Q9GZS3 305 aaKnown RBP2.78□□□□□ -1.96
HTT-211ENST00000513326 VCX3AQ9NNX9 186 aa2.78□□□□□ -1.96
HTT-211ENST00000513326 TRBV25-1A0A075B6N4 114 aa2.77□□□□□ -1.97
HTT-211ENST00000513326 TRAV8-4A0A0B4J246 113 aa2.77□□□□□ -1.97
HTT-211ENST00000513326 FAM168BA1KXE4 195 aa2.77□□□□□ -1.97
HTT-211ENST00000513326 SH2D1AO60880 128 aa2.77□□□□□ -1.97
HTT-211ENST00000513326 P01737 135 aa2.77□□□□□ -1.97
HTT-211ENST00000513326 RPL32P62910 135 aaKnown RBP2.77□□□□□ -1.97
HTT-211ENST00000513326 KRTAP19-2Q3LHN2 52 aa2.77□□□□□ -1.97
HTT-211ENST00000513326 C9orf116Q5BN46 136 aaPredicted RBP2.77□□□□□ -1.97
HTT-211ENST00000513326 STX12Q86Y82 276 aa2.77□□□□□ -1.97
HTT-211ENST00000513326 OR10AG1Q8NH19 301 aa2.77□□□□□ -1.97
HTT-211ENST00000513326 CHCHD10Q8WYQ3 142 aaPredicted RBP2.77□□□□□ -1.97
HTT-211ENST00000513326 CARD19Q96LW7 228 aa2.77□□□□□ -1.97
HTT-211ENST00000513326 SEC22CQ9BRL7 303 aa2.77□□□□□ -1.97
HTT-211ENST00000513326 PHLDA3Q9Y5J5 127 aa2.77□□□□□ -1.97
HTT-211ENST00000513326 ARL2-SNX15V9GYD0 113 aa2.77□□□□□ -1.97
HTT-211ENST00000513326 IGHV1-24A0A0C4DH33 117 aa2.76□□□□□ -1.97
HTT-211ENST00000513326 H3BMQ9 156 aa2.76□□□□□ -1.97
HTT-211ENST00000513326 ARL14EPLP0DKL9 152 aa2.76□□□□□ -1.97
HTT-211ENST00000513326 SULT1A2P50226 295 aa2.76□□□□□ -1.97
HTT-211ENST00000513326 UBE2D1P51668 147 aa2.76□□□□□ -1.97
HTT-211ENST00000513326 AP3S2P59780 193 aa2.76□□□□□ -1.97
HTT-211ENST00000513326 KRTAP10-12P60413 245 aa2.76□□□□□ -1.97
HTT-211ENST00000513326 RAB4BP61018 213 aa2.76□□□□□ -1.97
HTT-211ENST00000513326 PKIAP61925 76 aa2.76□□□□□ -1.97
HTT-211ENST00000513326 HBG1P69891 147 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms