RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 SUMO2P61956 95 aaKnown RBP5.21□□□□□ -1.58
HMGXB3-204ENST00000513318 NRACQ8N912 160 aa5.21□□□□□ -1.58
HMGXB3-204ENST00000513318 PRELID3AQ96N28 172 aa5.21□□□□□ -1.58
HMGXB3-204ENST00000513318 YPEL4Q96NS1 127 aa5.21□□□□□ -1.58
HMGXB3-204ENST00000513318 TMEM70Q9BUB7 260 aa5.21□□□□□ -1.58
HMGXB3-204ENST00000513318 ST20Q9HBF5 79 aa5.21□□□□□ -1.58
HMGXB3-204ENST00000513318 TRBV25-1A0A075B6N4 114 aa5.2□□□□□ -1.58
HMGXB3-204ENST00000513318 TRBV6-8A0A0A6YYG3 113 aa5.2□□□□□ -1.58
HMGXB3-204ENST00000513318 TRAV8-6A0A0B4J262 113 aa5.2□□□□□ -1.58
HMGXB3-204ENST00000513318 TNFRSF6BO95407 300 aa5.2□□□□□ -1.58
HMGXB3-204ENST00000513318 APCSP02743 223 aa5.2□□□□□ -1.58
HMGXB3-204ENST00000513318 POLR2KP53803 58 aaKnown RBP5.2□□□□□ -1.58
HMGXB3-204ENST00000513318 RPL32P62910 135 aaKnown RBP5.2□□□□□ -1.58
HMGXB3-204ENST00000513318 COTL1Q14019 142 aa5.2□□□□□ -1.58
HMGXB3-204ENST00000513318 WFDC10BQ8IUB3 73 aa5.2□□□□□ -1.58
HMGXB3-204ENST00000513318 C20orf78Q9BR46 151 aa5.2□□□□□ -1.58
HMGXB3-204ENST00000513318 DNAH6Q9C0G6 4158 aa5.19□□□□□ -1.58
HMGXB3-204ENST00000513318 IGHV1-24A0A0C4DH33 117 aa5.19□□□□□ -1.58
HMGXB3-204ENST00000513318 TRBV27A0A0K0K1C4 114 aa5.19□□□□□ -1.58
HMGXB3-204ENST00000513318 I3L3M4 83 aa5.19□□□□□ -1.58
HMGXB3-204ENST00000513318 SIVA1O15304 175 aa5.19□□□□□ -1.58
HMGXB3-204ENST00000513318 NPYP01303 97 aa5.19□□□□□ -1.58
HMGXB3-204ENST00000513318 PMCHP20382 165 aa5.19□□□□□ -1.58
HMGXB3-204ENST00000513318 IQCJQ1A5X6 159 aa5.19□□□□□ -1.58
HMGXB3-204ENST00000513318 KIR2DL4Q99706 377 aa5.19□□□□□ -1.58
HMGXB3-204ENST00000513318 SMIM2Q9BVW6 85 aa5.19□□□□□ -1.58
HMGXB3-204ENST00000513318 TRAPPC1Q9Y5R8 145 aa5.19□□□□□ -1.58
HMGXB3-204ENST00000513318 KMT2AQ03164 3969 aa5.18□□□□□ -1.58
HMGXB3-204ENST00000513318 VPS13DQ5THJ4 4388 aa5.18□□□□□ -1.58
HMGXB3-204ENST00000513318 K7EP13 123 aa5.18□□□□□ -1.58
HMGXB3-204ENST00000513318 VCYO14598 125 aa5.18□□□□□ -1.58
HMGXB3-204ENST00000513318 TCAPO15273 167 aa5.18□□□□□ -1.58
HMGXB3-204ENST00000513318 PLA2G1BP04054 148 aaKnown RBP5.18□□□□□ -1.58
HMGXB3-204ENST00000513318 DNAH10OSP0CZ25 163 aa5.18□□□□□ -1.58
HMGXB3-204ENST00000513318 AMTP48728 403 aa5.18□□□□□ -1.58
HMGXB3-204ENST00000513318 PKIAP61925 76 aa5.18□□□□□ -1.58
HMGXB3-204ENST00000513318 FABP9Q0Z7S8 132 aa5.18□□□□□ -1.58
HMGXB3-204ENST00000513318 KIAA1644Q3SXP7 199 aa5.18□□□□□ -1.58
HMGXB3-204ENST00000513318 TTC32Q5I0X7 151 aa5.18□□□□□ -1.58
HMGXB3-204ENST00000513318 LINC01556Q5JQF7 62 aa5.18□□□□□ -1.58
HMGXB3-204ENST00000513318 NTM-AS1Q6ZSK4 140 aa5.18□□□□□ -1.58
HMGXB3-204ENST00000513318 CHCHD7Q9BUK0 85 aa5.18□□□□□ -1.58
HMGXB3-204ENST00000513318 MAP1LC3AQ9H492 121 aa5.18□□□□□ -1.58
HMGXB3-204ENST00000513318 Q9H8V8 135 aa5.18□□□□□ -1.58
HMGXB3-204ENST00000513318 DNAH1Q9P2D7 4330 aa5.18□□□□□ -1.58
HMGXB3-204ENST00000513318 PRSS47A8MTI9 375 aa5.17□□□□□ -1.58
HMGXB3-204ENST00000513318 TSHBP01222 138 aa5.17□□□□□ -1.58
HMGXB3-204ENST00000513318 FCER1GP30273 86 aa5.17□□□□□ -1.58
HMGXB3-204ENST00000513318 NIT1Q86X76 327 aa5.17□□□□□ -1.58
HMGXB3-204ENST00000513318 CHCHD5Q9BSY4 110 aa5.17□□□□□ -1.58
HMGXB3-204ENST00000513318 TMEM243Q9BU79 118 aa5.17□□□□□ -1.58
HMGXB3-204ENST00000513318 IGLV2-18A0A075B6J9 118 aa5.16□□□□□ -1.58
HMGXB3-204ENST00000513318 NBDYA0A0U1RRE5 68 aa5.16□□□□□ -1.58
HMGXB3-204ENST00000513318 COLCA2A8K830 154 aa5.16□□□□□ -1.58
HMGXB3-204ENST00000513318 H7C423 109 aa5.16□□□□□ -1.58
HMGXB3-204ENST00000513318 UBE2L6O14933 153 aa5.16□□□□□ -1.58
HMGXB3-204ENST00000513318 LCE3BQ5TA77 95 aa5.16□□□□□ -1.58
HMGXB3-204ENST00000513318 C10orf126Q8N4M7 172 aa5.16□□□□□ -1.58
HMGXB3-204ENST00000513318 DEFB104AQ8WTQ1 72 aa5.16□□□□□ -1.58
HMGXB3-204ENST00000513318 ALKBH7Q9BT30 221 aaPredicted RBP5.16□□□□□ -1.58
HMGXB3-204ENST00000513318 NXT2Q9NPJ8 142 aaKnown RBP5.16□□□□□ -1.58
HMGXB3-204ENST00000513318 TRAV9-2A0A087WT02 112 aa5.15□□□□□ -1.59
HMGXB3-204ENST00000513318 A0A087WX48 190 aa5.15□□□□□ -1.59
HMGXB3-204ENST00000513318 LOC389332A0A1B0GUA5 103 aa5.15□□□□□ -1.59
HMGXB3-204ENST00000513318 K7EMI3 77 aa5.15□□□□□ -1.59
HMGXB3-204ENST00000513318 ESDP10768 282 aa5.15□□□□□ -1.59
HMGXB3-204ENST00000513318 RAB5AP20339 215 aa5.15□□□□□ -1.59
HMGXB3-204ENST00000513318 MPV17L2Q567V2 206 aa5.15□□□□□ -1.59
HMGXB3-204ENST00000513318 Q8N8P6 123 aa5.15□□□□□ -1.59
HMGXB3-204ENST00000513318 SACSQ9NZJ4 4579 aa5.14□□□□□ -1.59
HMGXB3-204ENST00000513318 A0A1B0GUV1 79 aa5.14□□□□□ -1.59
HMGXB3-204ENST00000513318 LOC105371267A0A1B0GV96 52 aa5.14□□□□□ -1.59
HMGXB3-204ENST00000513318 TMEM262E9PQX1 116 aa5.14□□□□□ -1.59
HMGXB3-204ENST00000513318 IGHV3-30P01768 117 aa5.14□□□□□ -1.59
HMGXB3-204ENST00000513318 IGHV3-33P01772 117 aa5.14□□□□□ -1.59
HMGXB3-204ENST00000513318 TRGC2P03986 189 aa5.14□□□□□ -1.59
HMGXB3-204ENST00000513318 IGHV3-30-3P0DP02 117 aa5.14□□□□□ -1.59
HMGXB3-204ENST00000513318 IGHV3-30-5P0DP03 117 aa5.14□□□□□ -1.59
HMGXB3-204ENST00000513318 ZNF25P17030 456 aaPredicted RBP5.14□□□□□ -1.59
HMGXB3-204ENST00000513318 BTF3P20290 206 aaKnown RBP5.14□□□□□ -1.59
HMGXB3-204ENST00000513318 SMAGPQ0VAQ4 97 aa5.14□□□□□ -1.59
HMGXB3-204ENST00000513318 GAGE6Q13070 117 aa5.14□□□□□ -1.59
HMGXB3-204ENST00000513318 LAGE3Q14657 143 aa5.14□□□□□ -1.59
HMGXB3-204ENST00000513318 Q6ZR54 194 aa5.14□□□□□ -1.59
HMGXB3-204ENST00000513318 C18orf32Q8TCD1 76 aa5.14□□□□□ -1.59
HMGXB3-204ENST00000513318 TMEM18Q96B42 140 aa5.14□□□□□ -1.59
HMGXB3-204ENST00000513318 KRTAP1-5Q9BYS1 174 aa5.14□□□□□ -1.59
HMGXB3-204ENST00000513318 TMA7Q9Y2S6 64 aaKnown RBP5.14□□□□□ -1.59
HMGXB3-204ENST00000513318 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.13□□□□□ -1.59
HMGXB3-204ENST00000513318 IGKV2-29A2NJV5 120 aaPredicted RBP5.13□□□□□ -1.59
HMGXB3-204ENST00000513318 ZNF561-AS1K7EIQ3 104 aa5.13□□□□□ -1.59
HMGXB3-204ENST00000513318 M0R2N4 97 aa5.13□□□□□ -1.59
HMGXB3-204ENST00000513318 IFI27P40305 119 aaPredicted RBP5.13□□□□□ -1.59
HMGXB3-204ENST00000513318 C21orf62-AS1Q17RA5 79 aa5.13□□□□□ -1.59
HMGXB3-204ENST00000513318 ORMDL2Q53FV1 153 aa5.13□□□□□ -1.59
HMGXB3-204ENST00000513318 AMMECR1LQ6DCA0 310 aa5.13□□□□□ -1.59
HMGXB3-204ENST00000513318 C20orf203Q8NBC4 194 aa5.13□□□□□ -1.59
HMGXB3-204ENST00000513318 PRSS3P2Q8NHM4 247 aa5.13□□□□□ -1.59
HMGXB3-204ENST00000513318 HYDINQ4G0P3 5121 aa5.13□□□□□ -1.59
HMGXB3-204ENST00000513318 KMT2CQ8NEZ4 4911 aaKnown RBP5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms