RNA–Protein interactions for RNA: ENST00000513121.1

MATR3-221, Transcript of matrin 3, humanhuman

TSL 2

Gene MATR3, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-221ENST00000513121 USP17L23D6RBM5 183 aa12.43□□□□□ -0.42
MATR3-221ENST00000513121 HLA-DQA1P01909 254 aa12.43□□□□□ -0.42
MATR3-221ENST00000513121 FAM231DQ6ZW35 169 aa12.43□□□□□ -0.42
MATR3-221ENST00000513121 RPL39LQ96EH5 51 aaKnown RBP12.43□□□□□ -0.42
MATR3-221ENST00000513121 PGLYRP4Q96LB8 373 aa12.43□□□□□ -0.42
MATR3-221ENST00000513121 TMEM243Q9BU79 118 aa12.43□□□□□ -0.42
MATR3-221ENST00000513121 PRSS1P07477 247 aa12.42□□□□□ -0.42
MATR3-221ENST00000513121 SCXQ7RTU7 201 aa12.42□□□□□ -0.42
MATR3-221ENST00000513121 EIF5A2Q9GZV4 153 aaKnown RBP12.42□□□□□ -0.42
MATR3-221ENST00000513121 IGLV10-54A0A075B6I4 117 aa12.41□□□□□ -0.42
MATR3-221ENST00000513121 SRP19P09132 144 aaKnown RBP12.41□□□□□ -0.42
MATR3-221ENST00000513121 REG3AQ06141 175 aa12.41□□□□□ -0.42
MATR3-221ENST00000513121 FAM210AQ96ND0 272 aa12.41□□□□□ -0.42
MATR3-221ENST00000513121 A0A1B0GUV1 79 aa12.4□□□□□ -0.42
MATR3-221ENST00000513121 GAS8-AS1O95177 125 aa12.4□□□□□ -0.42
MATR3-221ENST00000513121 LINC01551Q86U37 167 aa12.4□□□□□ -0.42
MATR3-221ENST00000513121 DMBT1Q9UGM3 2413 aaPredicted RBP12.39□□□□□ -0.43
MATR3-221ENST00000513121 C14orf177Q52M58 125 aa12.39□□□□□ -0.43
MATR3-221ENST00000513121 LINC00528Q8N1L1 170 aa12.39□□□□□ -0.43
MATR3-221ENST00000513121 SMIM7Q9BQ49 75 aa12.39□□□□□ -0.43
MATR3-221ENST00000513121 A8MWL6 223 aa12.38□□□□□ -0.43
MATR3-221ENST00000513121 AMTP48728 403 aa12.38□□□□□ -0.43
MATR3-221ENST00000513121 COTL1Q14019 142 aa12.38□□□□□ -0.43
MATR3-221ENST00000513121 CT83Q5H943 113 aa12.38□□□□□ -0.43
MATR3-221ENST00000513121 CHAC1Q9BUX1 264 aa12.38□□□□□ -0.43
MATR3-221ENST00000513121 CIRBP-AS1Q8TBR5 109 aa12.37□□□□□ -0.43
MATR3-221ENST00000513121 ZNF727A8MUV8 499 aa12.36□□□□□ -0.43
MATR3-221ENST00000513121 C9JQL5 133 aa12.36□□□□□ -0.43
MATR3-221ENST00000513121 NDUFS6O75380 124 aaKnown RBP12.36□□□□□ -0.43
MATR3-221ENST00000513121 SMIM15Q7Z3B0 74 aa12.35□□□□□ -0.43
MATR3-221ENST00000513121 TSKUQ8WUA8 353 aa12.35□□□□□ -0.43
MATR3-221ENST00000513121 OSTCQ9NRP0 149 aa12.35□□□□□ -0.43
MATR3-221ENST00000513121 HIGD1CA8MV81 97 aa12.34□□□□□ -0.43
MATR3-221ENST00000513121 UBE2L6O14933 153 aa12.34□□□□□ -0.43
MATR3-221ENST00000513121 RNF185Q96GF1 192 aa12.34□□□□□ -0.43
MATR3-221ENST00000513121 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.33□□□□□ -0.44
MATR3-221ENST00000513121 TRAV8-4A0A0B4J246 113 aa12.33□□□□□ -0.44
MATR3-221ENST00000513121 IGKV2-29A2NJV5 120 aaPredicted RBP12.33□□□□□ -0.44
MATR3-221ENST00000513121 SDHAF1A6NFY7 115 aa12.33□□□□□ -0.44
MATR3-221ENST00000513121 SRSF3P84103 164 aaKnown RBP12.33□□□□□ -0.44
MATR3-221ENST00000513121 V9GYV3 84 aa12.33□□□□□ -0.44
MATR3-221ENST00000513121 LRP1Q07954 4544 aaKnown RBP12.33□□□□□ -0.44
MATR3-221ENST00000513121 FAM231BA6NCW3 169 aa12.32□□□□□ -0.44
MATR3-221ENST00000513121 SLPIP03973 132 aa12.32□□□□□ -0.44
MATR3-221ENST00000513121 KRTAP10-4P60372 401 aaPredicted RBP12.32□□□□□ -0.44
MATR3-221ENST00000513121 DGAT2L7PQ6IED9 249 aa12.32□□□□□ -0.44
MATR3-221ENST00000513121 C9orf163Q8N9P6 203 aa12.32□□□□□ -0.44
MATR3-221ENST00000513121 A0A1B0GUT8 65 aa12.31□□□□□ -0.44
MATR3-221ENST00000513121 PANO1I0J062 215 aa12.31□□□□□ -0.44
MATR3-221ENST00000513121 RPS10P46783 165 aaKnown RBP12.31□□□□□ -0.44
MATR3-221ENST00000513121 TEX261Q6UWH6 196 aa12.31□□□□□ -0.44
MATR3-221ENST00000513121 ISOC2Q96AB3 205 aa12.31□□□□□ -0.44
MATR3-221ENST00000513121 IGKV3OR2-268A0A0C4DH90 116 aa12.3□□□□□ -0.44
MATR3-221ENST00000513121 TRBV6-5A0A0K0K1A5 114 aa12.3□□□□□ -0.44
MATR3-221ENST00000513121 NCR2O95944 276 aa12.3□□□□□ -0.44
MATR3-221ENST00000513121 PLA2G1BP04054 148 aaKnown RBP12.3□□□□□ -0.44
MATR3-221ENST00000513121 RAB4AP20338 218 aa12.3□□□□□ -0.44
MATR3-221ENST00000513121 RPL23P62829 140 aaKnown RBP12.3□□□□□ -0.44
MATR3-221ENST00000513121 TMEM191AQ9H0A3 160 aa12.3□□□□□ -0.44
MATR3-221ENST00000513121 FAT3Q8TDW7 4589 aa12.29□□□□□ -0.44
MATR3-221ENST00000513121 TMEM241Q24JQ0 296 aa12.29□□□□□ -0.44
MATR3-221ENST00000513121 SDIM1Q6ZPB5 146 aa12.29□□□□□ -0.44
MATR3-221ENST00000513121 AMN1Q8IY45 258 aa12.29□□□□□ -0.44
MATR3-221ENST00000513121 NUP35Q8NFH5 326 aa12.29□□□□□ -0.44
MATR3-221ENST00000513121 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.29□□□□□ -0.44
MATR3-221ENST00000513121 hDV102S1A0JD36 115 aa12.28□□□□□ -0.44
MATR3-221ENST00000513121 GAGE12HA6NDE8 117 aa12.28□□□□□ -0.44
MATR3-221ENST00000513121 I3L3M4 83 aa12.28□□□□□ -0.44
MATR3-221ENST00000513121 TSHBP01222 138 aa12.28□□□□□ -0.44
MATR3-221ENST00000513121 APCSP02743 223 aa12.28□□□□□ -0.44
MATR3-221ENST00000513121 FGF6P10767 208 aa12.28□□□□□ -0.44
MATR3-221ENST00000513121 PMCHP20382 165 aa12.28□□□□□ -0.44
MATR3-221ENST00000513121 RNASEKQ6P5S7 137 aaKnown RBP12.28□□□□□ -0.44
MATR3-221ENST00000513121 CLRN3Q8NCR9 226 aa12.28□□□□□ -0.44
MATR3-221ENST00000513121 BORCS7Q96B45 105 aa12.28□□□□□ -0.44
MATR3-221ENST00000513121 SMKR1H3BMG3 65 aa12.27□□□□□ -0.45
MATR3-221ENST00000513121 ESDP10768 282 aa12.27□□□□□ -0.45
MATR3-221ENST00000513121 POLR2KP53803 58 aaKnown RBP12.27□□□□□ -0.45
MATR3-221ENST00000513121 TMEM242Q9NWH2 141 aa12.27□□□□□ -0.45
MATR3-221ENST00000513121 CNBPP62633 177 aaKnown RBP12.26□□□□□ -0.45
MATR3-221ENST00000513121 AMMECR1LQ6DCA0 310 aa12.26□□□□□ -0.45
MATR3-221ENST00000513121 C15orf56Q8N910 161 aa12.26□□□□□ -0.45
MATR3-221ENST00000513121 ST20Q9HBF5 79 aa12.26□□□□□ -0.45
MATR3-221ENST00000513121 H7C423 109 aa12.25□□□□□ -0.45
MATR3-221ENST00000513121 ADIRFQ15847 76 aa12.25□□□□□ -0.45
MATR3-221ENST00000513121 FAM74A3Q4VXF1 159 aa12.25□□□□□ -0.45
MATR3-221ENST00000513121 CHCHD10Q8WYQ3 142 aaPredicted RBP12.25□□□□□ -0.45
MATR3-221ENST00000513121 PKHD1L1Q86WI1 4243 aa12.25□□□□□ -0.45
MATR3-221ENST00000513121 RIGQ13278 110 aa12.24□□□□□ -0.45
MATR3-221ENST00000513121 NAT8Q9UHE5 227 aa12.24□□□□□ -0.45
MATR3-221ENST00000513121 NRACQ8N912 160 aa12.23□□□□□ -0.45
MATR3-221ENST00000513121 MRAP2Q96G30 205 aa12.23□□□□□ -0.45
MATR3-221ENST00000513121 TRBV27A0A0K0K1C4 114 aa12.22□□□□□ -0.45
MATR3-221ENST00000513121 PEA15Q15121 130 aa12.22□□□□□ -0.45
MATR3-221ENST00000513121 NAT8BQ9UHF3 227 aa12.22□□□□□ -0.45
MATR3-221ENST00000513121 SMIM27A0A1W2PRY6 76 aa12.21□□□□□ -0.45
MATR3-221ENST00000513121 FOXI1Q12951 378 aa12.21□□□□□ -0.45
MATR3-221ENST00000513121 HIGD2BQ4VC39 106 aa12.21□□□□□ -0.45
MATR3-221ENST00000513121 CHTF8P0CG12 524 aa12.2□□□□□ -0.46
MATR3-221ENST00000513121 ZNF25P17030 456 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms