RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 TCRAP04437 139 aa5.1□□□□□ -1.59
CLCN3-208ENST00000512813 BCAP31P51572 246 aa5.1□□□□□ -1.59
CLCN3-208ENST00000512813 VAMP2P63027 116 aa5.1□□□□□ -1.59
CLCN3-208ENST00000512813 MZT2AQ6P582 158 aa5.1□□□□□ -1.59
CLCN3-208ENST00000512813 MRPL18Q9H0U6 180 aaKnown RBP5.1□□□□□ -1.59
CLCN3-208ENST00000512813 UBE2D4Q9Y2X8 147 aa5.1□□□□□ -1.59
CLCN3-208ENST00000512813 H3BMQ9 156 aa5.09□□□□□ -1.59
CLCN3-208ENST00000512813 RPL12P30050 165 aaKnown RBP5.09□□□□□ -1.59
CLCN3-208ENST00000512813 TAS2R45P59539 299 aa5.09□□□□□ -1.59
CLCN3-208ENST00000512813 OR2D3Q8NGH3 330 aa5.09□□□□□ -1.59
CLCN3-208ENST00000512813 AP3S1Q92572 193 aa5.09□□□□□ -1.59
CLCN3-208ENST00000512813 IMMP2LQ96T52 175 aa5.09□□□□□ -1.59
CLCN3-208ENST00000512813 MUC12Q9UKN1 5478 aa5.08□□□□□ -1.6
CLCN3-208ENST00000512813 LINC00959A0A1B0GUT2 108 aa5.08□□□□□ -1.6
CLCN3-208ENST00000512813 TLX1NBP0CAT3 122 aa5.08□□□□□ -1.6
CLCN3-208ENST00000512813 SULT1A1P50225 295 aa5.08□□□□□ -1.6
CLCN3-208ENST00000512813 HBG1P69891 147 aa5.08□□□□□ -1.6
CLCN3-208ENST00000512813 HBG2P69892 147 aa5.08□□□□□ -1.6
CLCN3-208ENST00000512813 IL18Q14116 193 aa5.08□□□□□ -1.6
CLCN3-208ENST00000512813 CD164L2Q6UWJ8 174 aa5.08□□□□□ -1.6
CLCN3-208ENST00000512813 C5orf17Q8NAS9 161 aa5.08□□□□□ -1.6
CLCN3-208ENST00000512813 MRPS26Q9BYN8 205 aaKnown RBP5.08□□□□□ -1.6
CLCN3-208ENST00000512813 KCNIP2Q9NS61 270 aa5.08□□□□□ -1.6
CLCN3-208ENST00000512813 M0QY20 66 aa5.07□□□□□ -1.6
CLCN3-208ENST00000512813 NEDD8Q15843 81 aa5.07□□□□□ -1.6
CLCN3-208ENST00000512813 ATP6V1FQ16864 119 aa5.07□□□□□ -1.6
CLCN3-208ENST00000512813 AMMECR1LQ6DCA0 310 aa5.07□□□□□ -1.6
CLCN3-208ENST00000512813 OR10AG1Q8NH19 301 aa5.07□□□□□ -1.6
CLCN3-208ENST00000512813 ZNF471Q9BX82 626 aaPredicted RBP5.07□□□□□ -1.6
CLCN3-208ENST00000512813 MRPL35Q9NZE8 188 aaKnown RBP5.07□□□□□ -1.6
CLCN3-208ENST00000512813 BCE1O60756 84 aa5.06□□□□□ -1.6
CLCN3-208ENST00000512813 MALP21145 153 aa5.06□□□□□ -1.6
CLCN3-208ENST00000512813 NKX2-5P52952 324 aaPredicted RBP5.06□□□□□ -1.6
CLCN3-208ENST00000512813 COTL1Q14019 142 aa5.06□□□□□ -1.6
CLCN3-208ENST00000512813 RNASEKQ6P5S7 137 aaKnown RBP5.06□□□□□ -1.6
CLCN3-208ENST00000512813 MCFD2Q8NI22 146 aa5.06□□□□□ -1.6
CLCN3-208ENST00000512813 THAP6Q8TBB0 222 aa5.06□□□□□ -1.6
CLCN3-208ENST00000512813 KRTAP4-9Q9BYQ8 210 aa5.06□□□□□ -1.6
CLCN3-208ENST00000512813 TMSB15BA0A087X1C1 80 aa5.05□□□□□ -1.6
CLCN3-208ENST00000512813 IGSF23A1L1A6 192 aa5.05□□□□□ -1.6
CLCN3-208ENST00000512813 C9orf170A2RU37 121 aa5.05□□□□□ -1.6
CLCN3-208ENST00000512813 SH2D1AO60880 128 aa5.05□□□□□ -1.6
CLCN3-208ENST00000512813 CRIP1P50238 77 aa5.05□□□□□ -1.6
CLCN3-208ENST00000512813 GAGE2EQ4V326 116 aa5.05□□□□□ -1.6
CLCN3-208ENST00000512813 STX12Q86Y82 276 aa5.05□□□□□ -1.6
CLCN3-208ENST00000512813 SLC25A21Q9BQT8 299 aaPredicted RBP5.05□□□□□ -1.6
CLCN3-208ENST00000512813 SMDT1Q9H4I9 107 aa5.05□□□□□ -1.6
CLCN3-208ENST00000512813 GAGE2DQ9UEU5 116 aa5.05□□□□□ -1.6
CLCN3-208ENST00000512813 NDUFA12Q9UI09 145 aa5.05□□□□□ -1.6
CLCN3-208ENST00000512813 ARL2-SNX15V9GYD0 113 aa5.05□□□□□ -1.6
CLCN3-208ENST00000512813 NCS1P62166 190 aa5.04□□□□□ -1.6
CLCN3-208ENST00000512813 PQLC2Q6ZP29 291 aa5.04□□□□□ -1.6
CLCN3-208ENST00000512813 TMEM252Q8N6L7 170 aa5.04□□□□□ -1.6
CLCN3-208ENST00000512813 LSM5Q9Y4Y9 91 aaKnown RBP5.04□□□□□ -1.6
CLCN3-208ENST00000512813 G3V3Q6 166 aa5.03□□□□□ -1.6
CLCN3-208ENST00000512813 H7C423 109 aa5.03□□□□□ -1.6
CLCN3-208ENST00000512813 COX7A2LO14548 114 aa5.03□□□□□ -1.6
CLCN3-208ENST00000512813 SMIM17P0DL12 118 aa5.03□□□□□ -1.6
CLCN3-208ENST00000512813 ZNF25P17030 456 aaPredicted RBP5.03□□□□□ -1.6
CLCN3-208ENST00000512813 FAUP35544 74 aaKnown RBP5.03□□□□□ -1.6
CLCN3-208ENST00000512813 SPAG11BQ08648 103 aa5.03□□□□□ -1.6
CLCN3-208ENST00000512813 C3orf22Q8N5N4 141 aa5.03□□□□□ -1.6
CLCN3-208ENST00000512813 KRTAP9-3Q9BYQ3 159 aa5.03□□□□□ -1.6
CLCN3-208ENST00000512813 KRTAP2-3P0C7H8 128 aa5.02□□□□□ -1.61
CLCN3-208ENST00000512813 CTRLP40313 264 aa5.02□□□□□ -1.61
CLCN3-208ENST00000512813 SUMO4Q6EEV6 95 aa5.02□□□□□ -1.61
CLCN3-208ENST00000512813 COX8CQ7Z4L0 72 aa5.02□□□□□ -1.61
CLCN3-208ENST00000512813 KRTAP13-1Q8IUC0 172 aa5.02□□□□□ -1.61
CLCN3-208ENST00000512813 AP1S3Q96PC3 154 aa5.02□□□□□ -1.61
CLCN3-208ENST00000512813 KRTAP2-4Q9BYR9 128 aa5.02□□□□□ -1.61
CLCN3-208ENST00000512813 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.01□□□□□ -1.61
CLCN3-208ENST00000512813 IGKV2-29A2NJV5 120 aaPredicted RBP5.01□□□□□ -1.61
CLCN3-208ENST00000512813 C17orf112F2Z3M2 114 aa5.01□□□□□ -1.61
CLCN3-208ENST00000512813 F8WDY8 70 aa5.01□□□□□ -1.61
CLCN3-208ENST00000512813 MT2AP02795 61 aa5.01□□□□□ -1.61
CLCN3-208ENST00000512813 VBP1P61758 197 aa5.01□□□□□ -1.61
CLCN3-208ENST00000512813 RASL11AQ6T310 242 aa5.01□□□□□ -1.61
CLCN3-208ENST00000512813 Q86TA4 180 aa5.01□□□□□ -1.61
CLCN3-208ENST00000512813 FAM19A2Q8N3H0 131 aa5.01□□□□□ -1.61
CLCN3-208ENST00000512813 EPDR1Q9UM22 224 aa5.01□□□□□ -1.61
CLCN3-208ENST00000512813 A6NHS1 94 aa5□□□□□ -1.61
CLCN3-208ENST00000512813 SNAI2O43623 268 aa5□□□□□ -1.61
CLCN3-208ENST00000512813 MGPP08493 103 aa5□□□□□ -1.61
CLCN3-208ENST00000512813 PVALBP20472 110 aaPredicted RBP5□□□□□ -1.61
CLCN3-208ENST00000512813 C9orf129Q5T035 196 aaKnown RBP5□□□□□ -1.61
CLCN3-208ENST00000512813 C10orf25Q5T742 122 aa5□□□□□ -1.61
CLCN3-208ENST00000512813 SPANXN1Q5VSR9 72 aa5□□□□□ -1.61
CLCN3-208ENST00000512813 WDR61Q9GZS3 305 aaKnown RBP5□□□□□ -1.61
CLCN3-208ENST00000512813 C6orf48Q9UBA6 75 aa5□□□□□ -1.61
CLCN3-208ENST00000512813 MUC21A0A140T8X8 626 aa4.99□□□□□ -1.61
CLCN3-208ENST00000512813 NDUFA1O15239 70 aa4.99□□□□□ -1.61
CLCN3-208ENST00000512813 GHRHP01286 108 aa4.99□□□□□ -1.61
CLCN3-208ENST00000512813 TMEM241Q24JQ0 296 aa4.99□□□□□ -1.61
CLCN3-208ENST00000512813 LBHQ53QV2 105 aaPredicted RBP4.99□□□□□ -1.61
CLCN3-208ENST00000512813 OR10D4PQ8NGN7 298 aa4.99□□□□□ -1.61
CLCN3-208ENST00000512813 NIT2Q9NQR4 276 aa4.99□□□□□ -1.61
CLCN3-208ENST00000512813 CTDSP2O14595 271 aa4.98□□□□□ -1.61
CLCN3-208ENST00000512813 RGS5O15539 181 aa4.98□□□□□ -1.61
CLCN3-208ENST00000512813 SPINK1P00995 79 aa4.98□□□□□ -1.61
CLCN3-208ENST00000512813 CXCL1P09341 107 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms