RNA–Protein interactions for RNA: ENST00000512385.5

SNCAIP-217, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,564 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-217ENST00000512385 FAM110DQ8TAY7 271 aaPredicted RBP10.29□□□□□ -0.76
SNCAIP-217ENST00000512385 TMEM263Q8WUH6 116 aaKnown RBP10.29□□□□□ -0.76
SNCAIP-217ENST00000512385 TRAV41A0A0B4J266 112 aa10.28□□□□□ -0.76
SNCAIP-217ENST00000512385 J3QLI3 93 aa10.28□□□□□ -0.76
SNCAIP-217ENST00000512385 ODF3Q96PU9 254 aa10.28□□□□□ -0.76
SNCAIP-217ENST00000512385 TRAV21A0A0B4J279 112 aa10.28□□□□□ -0.76
SNCAIP-217ENST00000512385 SDHAF1A6NFY7 115 aa10.28□□□□□ -0.76
SNCAIP-217ENST00000512385 EDN2P20800 178 aa10.28□□□□□ -0.76
SNCAIP-217ENST00000512385 TMEM262E9PQX1 116 aa10.27□□□□□ -0.76
SNCAIP-217ENST00000512385 C15orf53Q8NAA6 179 aa10.27□□□□□ -0.76
SNCAIP-217ENST00000512385 C2CD3Q4AC94 2353 aa10.27□□□□□ -0.77
SNCAIP-217ENST00000512385 KIF25-AS1Q9Y6Z4 181 aa10.27□□□□□ -0.77
SNCAIP-217ENST00000512385 TENM1Q9UKZ4 2725 aa10.27□□□□□ -0.77
SNCAIP-217ENST00000512385 GAGE12JA6NER3 117 aa10.26□□□□□ -0.77
SNCAIP-217ENST00000512385 GAGE7O76087 117 aa10.26□□□□□ -0.77
SNCAIP-217ENST00000512385 GAGE12FP0CL80 117 aa10.26□□□□□ -0.77
SNCAIP-217ENST00000512385 GAGE12GP0CL81 117 aa10.26□□□□□ -0.77
SNCAIP-217ENST00000512385 GAGE12IP0CL82 117 aa10.26□□□□□ -0.77
SNCAIP-217ENST00000512385 GAGE4Q13068 117 aa10.26□□□□□ -0.77
SNCAIP-217ENST00000512385 OR10J6PQ8NGY7 276 aa10.26□□□□□ -0.77
SNCAIP-217ENST00000512385 TRBV7-9A0A0J9YWB2 115 aa10.26□□□□□ -0.77
SNCAIP-217ENST00000512385 A8MZ25 164 aa10.26□□□□□ -0.77
SNCAIP-217ENST00000512385 PF4V1P10720 104 aa10.26□□□□□ -0.77
SNCAIP-217ENST00000512385 IFITM1P13164 125 aa10.26□□□□□ -0.77
SNCAIP-217ENST00000512385 POLR2KP53803 58 aaKnown RBP10.26□□□□□ -0.77
SNCAIP-217ENST00000512385 ZNF876PQ49A33 203 aa10.26□□□□□ -0.77
SNCAIP-217ENST00000512385 LINC01620Q4KN68 170 aa10.26□□□□□ -0.77
SNCAIP-217ENST00000512385 Q6YL49 198 aa10.26□□□□□ -0.77
SNCAIP-217ENST00000512385 ESM1Q9NQ30 184 aa10.26□□□□□ -0.77
SNCAIP-217ENST00000512385 A0A0J9YXV3 536 aa10.25□□□□□ -0.77
SNCAIP-217ENST00000512385 TRIAP1O43715 76 aa10.25□□□□□ -0.77
SNCAIP-217ENST00000512385 IGHG2P01859 326 aa10.25□□□□□ -0.77
SNCAIP-217ENST00000512385 PRSS2P07478 247 aa10.25□□□□□ -0.77
SNCAIP-217ENST00000512385 RNASE13Q5GAN3 156 aaKnown RBP10.25□□□□□ -0.77
SNCAIP-217ENST00000512385 C11orf44Q8N8P7 122 aa10.25□□□□□ -0.77
SNCAIP-217ENST00000512385 EEF1AKMT3Q96AZ1 226 aa10.25□□□□□ -0.77
SNCAIP-217ENST00000512385 DUX3Q96PT4 197 aa10.25□□□□□ -0.77
SNCAIP-217ENST00000512385 U3KQE9 123 aa10.25□□□□□ -0.77
SNCAIP-217ENST00000512385 CYSRT1A8MQ03 144 aa10.24□□□□□ -0.77
SNCAIP-217ENST00000512385 IGKV3-20P01619 116 aa10.24□□□□□ -0.77
SNCAIP-217ENST00000512385 VPREB3Q9UKI3 123 aa10.24□□□□□ -0.77
SNCAIP-217ENST00000512385 ATRQ13535 2644 aa10.24□□□□□ -0.77
SNCAIP-217ENST00000512385 MAST4O15021 2626 aa10.24□□□□□ -0.77
SNCAIP-217ENST00000512385 RPL32P62910 135 aaKnown RBP10.24□□□□□ -0.77
SNCAIP-217ENST00000512385 CLEC2BQ92478 149 aa10.24□□□□□ -0.77
SNCAIP-217ENST00000512385 LINC00477Q96M19 166 aa10.24□□□□□ -0.77
SNCAIP-217ENST00000512385 SPXQ9BT56 116 aa10.24□□□□□ -0.77
SNCAIP-217ENST00000512385 NOTCH3Q9UM47 2321 aa10.24□□□□□ -0.77
SNCAIP-217ENST00000512385 TRAV8-3A0A0A6YYJ7 113 aa10.23□□□□□ -0.77
SNCAIP-217ENST00000512385 TRAV8-4A0A0B4J246 113 aa10.23□□□□□ -0.77
SNCAIP-217ENST00000512385 CEMP1Q6PRD7 247 aaPredicted RBP10.23□□□□□ -0.77
SNCAIP-217ENST00000512385 VWFP04275 2813 aa10.23□□□□□ -0.77
SNCAIP-217ENST00000512385 TRAV12-3A0A0B4J271 114 aa10.23□□□□□ -0.77
SNCAIP-217ENST00000512385 MRPL53Q96EL3 112 aaKnown RBP10.23□□□□□ -0.77
SNCAIP-217ENST00000512385 NACAE9PAV3 2078 aa10.23□□□□□ -0.77
SNCAIP-217ENST00000512385 C19orf54Q5BKX5 351 aa10.22□□□□□ -0.77
SNCAIP-217ENST00000512385 ADAMTSL4-AS1Q5T5F5 129 aa10.22□□□□□ -0.77
SNCAIP-217ENST00000512385 CHCHD5Q9BSY4 110 aa10.22□□□□□ -0.77
SNCAIP-217ENST00000512385 TMEM223A0PJW6 202 aa10.22□□□□□ -0.77
SNCAIP-217ENST00000512385 VCYO14598 125 aa10.22□□□□□ -0.77
SNCAIP-217ENST00000512385 LY6G6DO95868 133 aa10.22□□□□□ -0.77
SNCAIP-217ENST00000512385 P0DMU3 169 aa10.22□□□□□ -0.77
SNCAIP-217ENST00000512385 FAM231AP0DMU4 169 aa10.22□□□□□ -0.77
SNCAIP-217ENST00000512385 FAM231CP0DMU5 169 aa10.22□□□□□ -0.77
SNCAIP-217ENST00000512385 C9orf139Q6ZV77 190 aa10.22□□□□□ -0.77
SNCAIP-217ENST00000512385 TRRAPQ9Y4A5 3859 aa10.22□□□□□ -0.77
SNCAIP-217ENST00000512385 TRAV12-2A0A075B6T6 113 aa10.21□□□□□ -0.77
SNCAIP-217ENST00000512385 ZNF22P17026 224 aaPredicted RBP10.21□□□□□ -0.77
SNCAIP-217ENST00000512385 PAPPA-AS1Q5QFB9 102 aa10.21□□□□□ -0.77
SNCAIP-217ENST00000512385 C18orf65Q6ZTR6 163 aa10.21□□□□□ -0.77
SNCAIP-217ENST00000512385 MDFICQ9P1T7 246 aa10.21□□□□□ -0.77
SNCAIP-217ENST00000512385 SOCS3O14543 225 aa10.21□□□□□ -0.78
SNCAIP-217ENST00000512385 C2orf82Q6UX34 121 aa10.21□□□□□ -0.78
SNCAIP-217ENST00000512385 ATXN8Q156A1 80 aa10.21□□□□□ -0.78
SNCAIP-217ENST00000512385 ZNF56Q15929 161 aa10.21□□□□□ -0.78
SNCAIP-217ENST00000512385 DAND5Q8N907 189 aa10.21□□□□□ -0.78
SNCAIP-217ENST00000512385 IGHV4OR15-8A0A075B7B6 117 aa10.2□□□□□ -0.78
SNCAIP-217ENST00000512385 A0A087WW49 117 aa10.2□□□□□ -0.78
SNCAIP-217ENST00000512385 A0A0J9YXY3 114 aa10.2□□□□□ -0.78
SNCAIP-217ENST00000512385 DNAJC9-AS1A6NH13 148 aa10.2□□□□□ -0.78
SNCAIP-217ENST00000512385 H7C423 109 aa10.2□□□□□ -0.78
SNCAIP-217ENST00000512385 TIMM17AQ99595 171 aa10.2□□□□□ -0.78
SNCAIP-217ENST00000512385 ZNF702PQ9H963 129 aa10.2□□□□□ -0.78
SNCAIP-217ENST00000512385 TRBV7-1A0A0A6YYK4 115 aa10.2□□□□□ -0.78
SNCAIP-217ENST00000512385 TMEM141Q96I45 108 aa10.2□□□□□ -0.78
SNCAIP-217ENST00000512385 INAFM1C9JVW0 142 aa10.19□□□□□ -0.78
SNCAIP-217ENST00000512385 H3BMM0 161 aa10.19□□□□□ -0.78
SNCAIP-217ENST00000512385 LEPROTO15243 131 aa10.19□□□□□ -0.78
SNCAIP-217ENST00000512385 MEIG1Q5JSS6 88 aa10.19□□□□□ -0.78
SNCAIP-217ENST00000512385 UBE2WQ96B02 151 aa10.19□□□□□ -0.78
SNCAIP-217ENST00000512385 IGHV3-73A0A0B4J1V6 119 aa10.19□□□□□ -0.78
SNCAIP-217ENST00000512385 DEFB136Q30KP8 78 aa10.19□□□□□ -0.78
SNCAIP-217ENST00000512385 A0A0B4J2C4 111 aa10.18□□□□□ -0.78
SNCAIP-217ENST00000512385 TRBV10-2A0A0K0K1G8 114 aa10.18□□□□□ -0.78
SNCAIP-217ENST00000512385 LGALS9O00182 355 aa10.18□□□□□ -0.78
SNCAIP-217ENST00000512385 Q9UF83 564 aa10.18□□□□□ -0.78
SNCAIP-217ENST00000512385 KLK9Q9UKQ9 250 aa10.18□□□□□ -0.78
SNCAIP-217ENST00000512385 LENEPQ9Y5L5 61 aa10.18□□□□□ -0.78
SNCAIP-217ENST00000512385 OVOL1O14753 267 aa10.18□□□□□ -0.78
SNCAIP-217ENST00000512385 BRI3O95415 125 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms