RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 TMEM243Q9BU79 118 aa10.83□□□□□ -0.68
DDX41-213ENST00000512027 V9GYV3 84 aa10.83□□□□□ -0.68
DDX41-213ENST00000512027 IGLV4-60A0A075B6I1 120 aa10.82□□□□□ -0.68
DDX41-213ENST00000512027 SMR3BP02814 79 aaPredicted RBP10.82□□□□□ -0.68
DDX41-213ENST00000512027 PKIAP61925 76 aa10.82□□□□□ -0.68
DDX41-213ENST00000512027 ADIRFQ15847 76 aa10.82□□□□□ -0.68
DDX41-213ENST00000512027 TMEM241Q24JQ0 296 aa10.82□□□□□ -0.68
DDX41-213ENST00000512027 C20orf203Q8NBC4 194 aa10.82□□□□□ -0.68
DDX41-213ENST00000512027 GFRA4Q9GZZ7 299 aa10.82□□□□□ -0.68
DDX41-213ENST00000512027 VPS13BQ7Z7G8 4022 aa10.82□□□□□ -0.68
DDX41-213ENST00000512027 A0A1B0GUT8 65 aa10.81□□□□□ -0.68
DDX41-213ENST00000512027 AMTP48728 403 aa10.81□□□□□ -0.68
DDX41-213ENST00000512027 COTL1Q14019 142 aa10.81□□□□□ -0.68
DDX41-213ENST00000512027 BORCS7Q96B45 105 aa10.81□□□□□ -0.68
DDX41-213ENST00000512027 PRR34Q9NV39 138 aa10.81□□□□□ -0.68
DDX41-213ENST00000512027 IGLV10-54A0A075B6I4 117 aa10.8□□□□□ -0.68
DDX41-213ENST00000512027 MIAQ16674 131 aa10.8□□□□□ -0.68
DDX41-213ENST00000512027 REG3AQ06141 175 aa10.79□□□□□ -0.68
DDX41-213ENST00000512027 PEA15Q15121 130 aa10.79□□□□□ -0.68
DDX41-213ENST00000512027 FAM74A3Q4VXF1 159 aa10.79□□□□□ -0.68
DDX41-213ENST00000512027 KRTAP26-1Q6PEX3 210 aa10.79□□□□□ -0.68
DDX41-213ENST00000512027 NUP35Q8NFH5 326 aa10.79□□□□□ -0.68
DDX41-213ENST00000512027 RNF185Q96GF1 192 aa10.79□□□□□ -0.68
DDX41-213ENST00000512027 TMEM70Q9BUB7 260 aa10.79□□□□□ -0.68
DDX41-213ENST00000512027 NAT8Q9UHE5 227 aa10.79□□□□□ -0.68
DDX41-213ENST00000512027 SDHAF1A6NFY7 115 aa10.78□□□□□ -0.68
DDX41-213ENST00000512027 EPM2AB3EWF7 344 aa10.78□□□□□ -0.68
DDX41-213ENST00000512027 USP17L23D6RBM5 183 aa10.78□□□□□ -0.68
DDX41-213ENST00000512027 UBE2L6O14933 153 aa10.78□□□□□ -0.68
DDX41-213ENST00000512027 AMN1Q8IY45 258 aa10.78□□□□□ -0.68
DDX41-213ENST00000512027 FRZBQ92765 325 aa10.78□□□□□ -0.68
DDX41-213ENST00000512027 TMEM191AQ9H0A3 160 aa10.78□□□□□ -0.68
DDX41-213ENST00000512027 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.77□□□□□ -0.69
DDX41-213ENST00000512027 IGKV2-29A2NJV5 120 aaPredicted RBP10.77□□□□□ -0.69
DDX41-213ENST00000512027 FAM231BA6NCW3 169 aa10.77□□□□□ -0.69
DDX41-213ENST00000512027 SMKR1H3BMG3 65 aa10.77□□□□□ -0.69
DDX41-213ENST00000512027 RPS10P46783 165 aaKnown RBP10.77□□□□□ -0.69
DDX41-213ENST00000512027 Q5VSD8 79 aa10.77□□□□□ -0.69
DDX41-213ENST00000512027 SRRM2Q9UQ35 2752 aaKnown RBP10.77□□□□□ -0.69
DDX41-213ENST00000512027 NCR2O95944 276 aa10.76□□□□□ -0.69
DDX41-213ENST00000512027 RAB4AP20338 218 aa10.76□□□□□ -0.69
DDX41-213ENST00000512027 A0A1B0GUV1 79 aa10.75□□□□□ -0.69
DDX41-213ENST00000512027 APCSP02743 223 aa10.75□□□□□ -0.69
DDX41-213ENST00000512027 IGKV3OR2-268A0A0C4DH90 116 aa10.74□□□□□ -0.69
DDX41-213ENST00000512027 TRBV6-5A0A0K0K1A5 114 aa10.74□□□□□ -0.69
DDX41-213ENST00000512027 PRSS1P07477 247 aa10.74□□□□□ -0.69
DDX41-213ENST00000512027 RIGQ13278 110 aa10.74□□□□□ -0.69
DDX41-213ENST00000512027 Q6ZSA8 131 aa10.74□□□□□ -0.69
DDX41-213ENST00000512027 TMEM242Q9NWH2 141 aa10.74□□□□□ -0.69
DDX41-213ENST00000512027 NAT8BQ9UHF3 227 aa10.74□□□□□ -0.69
DDX41-213ENST00000512027 SMIM27A0A1W2PRY6 76 aa10.73□□□□□ -0.69
DDX41-213ENST00000512027 PMCHP20382 165 aa10.73□□□□□ -0.69
DDX41-213ENST00000512027 SMDT1Q9H4I9 107 aa10.73□□□□□ -0.69
DDX41-213ENST00000512027 ST20Q9HBF5 79 aa10.73□□□□□ -0.69
DDX41-213ENST00000512027 I3L3M4 83 aa10.72□□□□□ -0.69
DDX41-213ENST00000512027 TSHBP01222 138 aa10.72□□□□□ -0.69
DDX41-213ENST00000512027 C14orf177Q52M58 125 aa10.72□□□□□ -0.69
DDX41-213ENST00000512027 AMMECR1LQ6DCA0 310 aa10.72□□□□□ -0.69
DDX41-213ENST00000512027 RNASEKQ6P5S7 137 aaKnown RBP10.72□□□□□ -0.69
DDX41-213ENST00000512027 FGF6P10767 208 aa10.71□□□□□ -0.69
DDX41-213ENST00000512027 CAMPP49913 170 aa10.71□□□□□ -0.69
DDX41-213ENST00000512027 MRAP2Q96G30 205 aa10.71□□□□□ -0.69
DDX41-213ENST00000512027 POLR2KP53803 58 aaKnown RBP10.7□□□□□ -0.7
DDX41-213ENST00000512027 MRPL54Q6P161 138 aaKnown RBP10.7□□□□□ -0.7
DDX41-213ENST00000512027 TRAV8-4A0A0B4J246 113 aa10.69□□□□□ -0.7
DDX41-213ENST00000512027 MRPL51Q4U2R6 128 aaKnown RBP10.69□□□□□ -0.7
DDX41-213ENST00000512027 SCXQ7RTU7 201 aa10.69□□□□□ -0.7
DDX41-213ENST00000512027 NRACQ8N912 160 aa10.69□□□□□ -0.7
DDX41-213ENST00000512027 GAGE12HA6NDE8 117 aa10.68□□□□□ -0.7
DDX41-213ENST00000512027 ESDP10768 282 aa10.68□□□□□ -0.7
DDX41-213ENST00000512027 FAM104BQ5XKR9 115 aa10.68□□□□□ -0.7
DDX41-213ENST00000512027 MYCBP2O75592 4640 aa10.67□□□□□ -0.7
DDX41-213ENST00000512027 TRBV27A0A0K0K1C4 114 aa10.67□□□□□ -0.7
DDX41-213ENST00000512027 INAFM2P0DMQ5 153 aa10.67□□□□□ -0.7
DDX41-213ENST00000512027 hDV102S1A0JD36 115 aa10.66□□□□□ -0.7
DDX41-213ENST00000512027 FAM229AH3BQW9 127 aa10.66□□□□□ -0.7
DDX41-213ENST00000512027 H7C423 109 aa10.66□□□□□ -0.7
DDX41-213ENST00000512027 RAB14P61106 215 aa10.66□□□□□ -0.7
DDX41-213ENST00000512027 A0A1B0GXF2 115 aa10.65□□□□□ -0.7
DDX41-213ENST00000512027 SUMO2P61956 95 aaKnown RBP10.65□□□□□ -0.7
DDX41-213ENST00000512027 LINC00528Q8N1L1 170 aa10.65□□□□□ -0.7
DDX41-213ENST00000512027 C15orf56Q8N910 161 aa10.65□□□□□ -0.7
DDX41-213ENST00000512027 CHCHD10Q8WYQ3 142 aaPredicted RBP10.65□□□□□ -0.7
DDX41-213ENST00000512027 CHAC1Q9BUX1 264 aa10.65□□□□□ -0.7
DDX41-213ENST00000512027 C7orf77A4D0Y5 90 aa10.64□□□□□ -0.71
DDX41-213ENST00000512027 HBBP68871 147 aa10.64□□□□□ -0.71
DDX41-213ENST00000512027 CIRBP-AS1Q8TBR5 109 aa10.64□□□□□ -0.71
DDX41-213ENST00000512027 BTF3L4Q96K17 158 aa10.64□□□□□ -0.71
DDX41-213ENST00000512027 FLG2Q5D862 2391 aaPredicted RBP10.63□□□□□ -0.71
DDX41-213ENST00000512027 A0A1B0GW15 77 aa10.63□□□□□ -0.71
DDX41-213ENST00000512027 VCYO14598 125 aa10.63□□□□□ -0.71
DDX41-213ENST00000512027 SLPIP03973 132 aa10.63□□□□□ -0.71
DDX41-213ENST00000512027 ZNF25P17030 456 aaPredicted RBP10.63□□□□□ -0.71
DDX41-213ENST00000512027 FCER1GP30273 86 aa10.63□□□□□ -0.71
DDX41-213ENST00000512027 CKS2P33552 79 aa10.63□□□□□ -0.71
DDX41-213ENST00000512027 IFITM2Q01629 132 aa10.63□□□□□ -0.71
DDX41-213ENST00000512027 DGAT2L7PQ6IED9 249 aa10.63□□□□□ -0.71
DDX41-213ENST00000512027 C9orf163Q8N9P6 203 aa10.63□□□□□ -0.71
DDX41-213ENST00000512027 OR5A1Q8NGJ0 315 aa10.63□□□□□ -0.71
DDX41-213ENST00000512027 TMEM101Q96IK0 257 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms