RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 UNC13BO14795 1591 aa0.24□□□□□ -2.37
CHD1-207ENST00000511628 PPIP5K1Q6PFW1 1433 aa0.24□□□□□ -2.37
CHD1-207ENST00000511628 KTN1Q86UP2 1357 aaKnown RBP0.24□□□□□ -2.37
CHD1-207ENST00000511628 LOC285095A0A1B0GVY8 99 aa0.24□□□□□ -2.37
CHD1-207ENST00000511628 MRPS10P82664 201 aaKnown RBP0.24□□□□□ -2.37
CHD1-207ENST00000511628 RBM3P98179 157 aaKnown RBP0.24□□□□□ -2.37
CHD1-207ENST00000511628 SPAG11BQ08648 103 aa0.24□□□□□ -2.37
CHD1-207ENST00000511628 SPAG11AQ6PDA7 123 aa0.24□□□□□ -2.37
CHD1-207ENST00000511628 Q8N8P6 123 aa0.24□□□□□ -2.37
CHD1-207ENST00000511628 MYOZ3Q8TDC0 251 aa0.24□□□□□ -2.37
CHD1-207ENST00000511628 BICRAQ9NZM4 1560 aa0.23□□□□□ -2.37
CHD1-207ENST00000511628 CASKIN1Q8WXD9 1431 aa0.23□□□□□ -2.37
CHD1-207ENST00000511628 M0R135 149 aa0.23□□□□□ -2.37
CHD1-207ENST00000511628 CCL18P55774 89 aa0.23□□□□□ -2.37
CHD1-207ENST00000511628 TPPP2P59282 170 aa0.23□□□□□ -2.37
CHD1-207ENST00000511628 CATR1Q13166 79 aa0.23□□□□□ -2.37
CHD1-207ENST00000511628 COX17Q14061 63 aa0.23□□□□□ -2.37
CHD1-207ENST00000511628 CFAP126Q5VTH2 177 aa0.23□□□□□ -2.37
CHD1-207ENST00000511628 LSM10Q969L4 123 aaKnown RBP0.23□□□□□ -2.37
CHD1-207ENST00000511628 TMEM203Q969S6 136 aa0.23□□□□□ -2.37
CHD1-207ENST00000511628 MGST2Q99735 147 aa0.23□□□□□ -2.37
CHD1-207ENST00000511628 CNFNQ9BYD5 112 aa0.23□□□□□ -2.37
CHD1-207ENST00000511628 NPVFQ9HCQ7 196 aa0.23□□□□□ -2.37
CHD1-207ENST00000511628 DYNLRB1Q9NP97 96 aa0.23□□□□□ -2.37
CHD1-207ENST00000511628 SCN3BQ9NY72 215 aa0.23□□□□□ -2.37
CHD1-207ENST00000511628 IER3IP1Q9Y5U9 82 aa0.23□□□□□ -2.37
CHD1-207ENST00000511628 V9GYH0 126 aa0.23□□□□□ -2.37
CHD1-207ENST00000511628 IGF2RP11717 2491 aa0.23□□□□□ -2.37
CHD1-207ENST00000511628 SPTBN2O15020 2390 aa0.23□□□□□ -2.37
CHD1-207ENST00000511628 ZNF609O15014 1411 aa0.22□□□□□ -2.37
CHD1-207ENST00000511628 SPEF2Q9C093 1822 aa0.22□□□□□ -2.37
CHD1-207ENST00000511628 ROCK2O75116 1388 aaKnown RBP0.22□□□□□ -2.37
CHD1-207ENST00000511628 NWD2Q9ULI1 1742 aa0.22□□□□□ -2.37
CHD1-207ENST00000511628 TRBV7-3A0A075B6L6 115 aa0.22□□□□□ -2.37
CHD1-207ENST00000511628 CTXND1A0A1B0GTU2 59 aa0.22□□□□□ -2.37
CHD1-207ENST00000511628 FAM24AA6NFZ4 105 aa0.22□□□□□ -2.37
CHD1-207ENST00000511628 MIF4GDA9UHW6 222 aaKnown RBP0.22□□□□□ -2.37
CHD1-207ENST00000511628 DLEU1O43261 78 aa0.22□□□□□ -2.37
CHD1-207ENST00000511628 APOC3P02656 99 aa0.22□□□□□ -2.37
CHD1-207ENST00000511628 MRPL54Q6P161 138 aaKnown RBP0.22□□□□□ -2.37
CHD1-207ENST00000511628 COMMD6Q7Z4G1 85 aa0.22□□□□□ -2.37
CHD1-207ENST00000511628 C5orf38Q86SI9 138 aa0.22□□□□□ -2.37
CHD1-207ENST00000511628 AMELXQ99217 191 aa0.22□□□□□ -2.37
CHD1-207ENST00000511628 SPCS1Q9Y6A9 102 aa0.22□□□□□ -2.37
CHD1-207ENST00000511628 SSC5DA1L4H1 1573 aa0.22□□□□□ -2.37
CHD1-207ENST00000511628 MYH8P13535 1937 aa0.22□□□□□ -2.37
CHD1-207ENST00000511628 GOLGA4Q13439 2230 aaKnown RBP0.22□□□□□ -2.37
CHD1-207ENST00000511628 ZMYM4Q5VZL5 1548 aa0.22□□□□□ -2.37
CHD1-207ENST00000511628 ARFGEF1Q9Y6D6 1849 aa0.22□□□□□ -2.37
CHD1-207ENST00000511628 SMG6Q86US8 1419 aaKnown RBP0.21□□□□□ -2.38
CHD1-207ENST00000511628 FAM208BQ5VWN6 2430 aa0.21□□□□□ -2.38
CHD1-207ENST00000511628 UBE2L5PA0A1B0GUS4 154 aa0.21□□□□□ -2.38
CHD1-207ENST00000511628 ZNF815PA8K554 130 aa0.21□□□□□ -2.38
CHD1-207ENST00000511628 G3V318 75 aa0.21□□□□□ -2.38
CHD1-207ENST00000511628 CORTO00230 105 aa0.21□□□□□ -2.38
CHD1-207ENST00000511628 UQCR11O14957 56 aa0.21□□□□□ -2.38
CHD1-207ENST00000511628 GNG4P50150 75 aa0.21□□□□□ -2.38
CHD1-207ENST00000511628 ATP5EP56381 51 aaPredicted RBP0.21□□□□□ -2.38
CHD1-207ENST00000511628 UBE2L3P68036 154 aaKnown RBP0.21□□□□□ -2.38
CHD1-207ENST00000511628 WHAMMP3Q1A5X7 153 aa0.21□□□□□ -2.38
CHD1-207ENST00000511628 TMEM170BQ5T4T1 132 aa0.21□□□□□ -2.38
CHD1-207ENST00000511628 SSBP3-AS1Q7Z2R9 100 aa0.21□□□□□ -2.38
CHD1-207ENST00000511628 BAGE2Q86Y30 109 aa0.21□□□□□ -2.38
CHD1-207ENST00000511628 PLCE1Q9P212 2302 aa0.21□□□□□ -2.38
CHD1-207ENST00000511628 BCL9LQ86UU0 1499 aa0.21□□□□□ -2.38
CHD1-207ENST00000511628 MAST4O15021 2626 aa0.2□□□□□ -2.38
CHD1-207ENST00000511628 SIPA1L3O60292 1781 aaPredicted RBP0.2□□□□□ -2.38
CHD1-207ENST00000511628 LOC100130705A0A1B0GUX0 176 aa0.2□□□□□ -2.38
CHD1-207ENST00000511628 F8VRH5 84 aa0.2□□□□□ -2.38
CHD1-207ENST00000511628 H3BQ15 152 aa0.2□□□□□ -2.38
CHD1-207ENST00000511628 SNAPC5O75971 98 aa0.2□□□□□ -2.38
CHD1-207ENST00000511628 DCDP81605 110 aaKnown RBP0.2□□□□□ -2.38
CHD1-207ENST00000511628 C9orf153Q5TBE3 101 aa0.2□□□□□ -2.38
CHD1-207ENST00000511628 SVBPQ8N300 66 aa0.2□□□□□ -2.38
CHD1-207ENST00000511628 UQCR10Q9UDW1 63 aa0.2□□□□□ -2.38
CHD1-207ENST00000511628 GNG8Q9UK08 70 aa0.2□□□□□ -2.38
CHD1-207ENST00000511628 WDR7Q9Y4E6 1490 aa0.2□□□□□ -2.38
CHD1-207ENST00000511628 CPSF1Q10570 1443 aaKnown RBP0.2□□□□□ -2.38
CHD1-207ENST00000511628 A2ML1A8K2U0 1454 aa0.19□□□□□ -2.38
CHD1-207ENST00000511628 GOLGA3Q08378 1498 aa0.19□□□□□ -2.38
CHD1-207ENST00000511628 MBD5Q9P267 1494 aa0.19□□□□□ -2.38
CHD1-207ENST00000511628 SHANK2Q9UPX8 1470 aa0.19□□□□□ -2.38
CHD1-207ENST00000511628 OOSP1A8MZH6 123 aa0.19□□□□□ -2.38
CHD1-207ENST00000511628 F6UZH7 168 aa0.19□□□□□ -2.38
CHD1-207ENST00000511628 IFITM1P13164 125 aa0.19□□□□□ -2.38
CHD1-207ENST00000511628 PPP3R1P63098 170 aa0.19□□□□□ -2.38
CHD1-207ENST00000511628 C2orf88Q9BSF0 95 aa0.19□□□□□ -2.38
CHD1-207ENST00000511628 NDUFA4L2Q9NRX3 87 aa0.19□□□□□ -2.38
CHD1-207ENST00000511628 LINC01558Q9Y6Z2 57 aa0.19□□□□□ -2.38
CHD1-207ENST00000511628 U3KQA8 63 aa0.19□□□□□ -2.38
CHD1-207ENST00000511628 PATJQ8NI35 1801 aa0.19□□□□□ -2.38
CHD1-207ENST00000511628 C2CD3Q4AC94 2353 aa0.19□□□□□ -2.38
CHD1-207ENST00000511628 DOPEY2Q9Y3R5 2298 aa0.18□□□□□ -2.38
CHD1-207ENST00000511628 ZFYVE26Q68DK2 2539 aa0.18□□□□□ -2.38
CHD1-207ENST00000511628 DOCK2Q92608 1830 aa0.18□□□□□ -2.38
CHD1-207ENST00000511628 MRC1P22897 1456 aa0.18□□□□□ -2.38
CHD1-207ENST00000511628 A0A1B0GV90 55 aa0.18□□□□□ -2.38
CHD1-207ENST00000511628 IGLC7A0M8Q6 106 aa0.18□□□□□ -2.38
CHD1-207ENST00000511628 SFT2D2O95562 160 aa0.18□□□□□ -2.38
CHD1-207ENST00000511628 CFDP00746 253 aaPredicted RBP0.18□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms