RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 MAP1LC3AQ9H492 121 aa1.97□□□□□ -2.09
CLOCK-209ENST00000511124 SMDT1Q9H4I9 107 aa1.97□□□□□ -2.09
CLOCK-209ENST00000511124 SPANXA1Q9NS26 97 aa1.97□□□□□ -2.09
CLOCK-209ENST00000511124 GNG13Q9P2W3 67 aa1.97□□□□□ -2.09
CLOCK-209ENST00000511124 LAMTOR2Q9Y2Q5 125 aa1.97□□□□□ -2.09
CLOCK-209ENST00000511124 BOD1L1Q8NFC6 3051 aa1.97□□□□□ -2.09
CLOCK-209ENST00000511124 DNHD1Q96M86 4753 aa1.96□□□□□ -2.1
CLOCK-209ENST00000511124 IGHV3-73A0A0B4J1V6 119 aa1.96□□□□□ -2.1
CLOCK-209ENST00000511124 USP17L23D6RBM5 183 aa1.96□□□□□ -2.1
CLOCK-209ENST00000511124 TMEM250H0YL14 139 aa1.96□□□□□ -2.1
CLOCK-209ENST00000511124 NUPR1O60356 82 aa1.96□□□□□ -2.1
CLOCK-209ENST00000511124 SFTA3P0C7M3 94 aa1.96□□□□□ -2.1
CLOCK-209ENST00000511124 HOXA5P20719 270 aa1.96□□□□□ -2.1
CLOCK-209ENST00000511124 GAGE2BQ13066 116 aa1.96□□□□□ -2.1
CLOCK-209ENST00000511124 ORMDL2Q53FV1 153 aa1.96□□□□□ -2.1
CLOCK-209ENST00000511124 FA2HQ7L5A8 372 aa1.96□□□□□ -2.1
CLOCK-209ENST00000511124 BAALCQ8WXS3 180 aa1.96□□□□□ -2.1
CLOCK-209ENST00000511124 VCX2Q9H322 139 aa1.96□□□□□ -2.1
CLOCK-209ENST00000511124 IGLV1-50A0A075B6I6 118 aa1.96□□□□□ -2.1
CLOCK-209ENST00000511124 A0A087WZ39 114 aa1.96□□□□□ -2.1
CLOCK-209ENST00000511124 A0A1B0GUT8 65 aa1.96□□□□□ -2.1
CLOCK-209ENST00000511124 K7EMI3 77 aa1.96□□□□□ -2.1
CLOCK-209ENST00000511124 SH2D1AO60880 128 aa1.96□□□□□ -2.1
CLOCK-209ENST00000511124 IGFL4Q6B9Z1 124 aa1.96□□□□□ -2.1
CLOCK-209ENST00000511124 SPAG11AQ6PDA7 123 aa1.96□□□□□ -2.1
CLOCK-209ENST00000511124 FAM24BQ8N5W8 94 aa1.96□□□□□ -2.1
CLOCK-209ENST00000511124 OR10G8Q8NGN5 311 aa1.96□□□□□ -2.1
CLOCK-209ENST00000511124 C2orf48Q96LS8 159 aa1.96□□□□□ -2.1
CLOCK-209ENST00000511124 FAM30AQ9NZY2 134 aa1.96□□□□□ -2.1
CLOCK-209ENST00000511124 TRBV20OR9-2A0A075B6H5 130 aa1.96□□□□□ -2.1
CLOCK-209ENST00000511124 A0A0G2JRQ6 117 aa1.96□□□□□ -2.1
CLOCK-209ENST00000511124 CKS2P33552 79 aa1.96□□□□□ -2.1
CLOCK-209ENST00000511124 RHEBQ15382 184 aa1.96□□□□□ -2.1
CLOCK-209ENST00000511124 SPINK6Q6UWN8 80 aa1.96□□□□□ -2.1
CLOCK-209ENST00000511124 Q86TA4 180 aa1.96□□□□□ -2.1
CLOCK-209ENST00000511124 SLC25A29Q8N8R3 303 aa1.96□□□□□ -2.1
CLOCK-209ENST00000511124 TVP23CQ96ET8 276 aa1.96□□□□□ -2.1
CLOCK-209ENST00000511124 PHYHIPLQ96FC7 376 aa1.96□□□□□ -2.1
CLOCK-209ENST00000511124 ZNF479Q96JC4 524 aa1.96□□□□□ -2.1
CLOCK-209ENST00000511124 CTDSP1Q9GZU7 261 aa1.96□□□□□ -2.1
CLOCK-209ENST00000511124 CYSLTR1Q9Y271 337 aa1.96□□□□□ -2.1
CLOCK-209ENST00000511124 BIRC6Q9NR09 4857 aa1.95□□□□□ -2.1
CLOCK-209ENST00000511124 A0A1B0GUV1 79 aa1.95□□□□□ -2.1
CLOCK-209ENST00000511124 GAGE12HA6NDE8 117 aa1.95□□□□□ -2.1
CLOCK-209ENST00000511124 ARPC5O15511 151 aa1.95□□□□□ -2.1
CLOCK-209ENST00000511124 CCL20P78556 96 aa1.95□□□□□ -2.1
CLOCK-209ENST00000511124 DNLZQ5SXM8 178 aa1.95□□□□□ -2.1
CLOCK-209ENST00000511124 CFAP126Q5VTH2 177 aa1.95□□□□□ -2.1
CLOCK-209ENST00000511124 PET117Q6UWS5 81 aa1.95□□□□□ -2.1
CLOCK-209ENST00000511124 ALKAL2Q6UX46 152 aa1.95□□□□□ -2.1
CLOCK-209ENST00000511124 SMIM7Q9BQ49 75 aa1.95□□□□□ -2.1
CLOCK-209ENST00000511124 SAMD10Q9BYL1 202 aa1.95□□□□□ -2.1
CLOCK-209ENST00000511124 MRPL18Q9H0U6 180 aaKnown RBP1.95□□□□□ -2.1
CLOCK-209ENST00000511124 RPP21Q9H633 154 aaKnown RBP1.95□□□□□ -2.1
CLOCK-209ENST00000511124 VPS13BQ7Z7G8 4022 aa1.95□□□□□ -2.1
CLOCK-209ENST00000511124 UTP20O75691 2785 aaKnown RBP1.95□□□□□ -2.1
CLOCK-209ENST00000511124 IGKV1D-37A0A075B6S9 117 aa1.95□□□□□ -2.1
CLOCK-209ENST00000511124 TRAV8-2A0A0B4J237 113 aa1.95□□□□□ -2.1
CLOCK-209ENST00000511124 ATP5LO75964 103 aa1.95□□□□□ -2.1
CLOCK-209ENST00000511124 PRSS1P07477 247 aa1.95□□□□□ -2.1
CLOCK-209ENST00000511124 BRWD1-AS2P59051 145 aa1.95□□□□□ -2.1
CLOCK-209ENST00000511124 IQCJQ1A5X6 159 aa1.95□□□□□ -2.1
CLOCK-209ENST00000511124 RNF151Q2KHN1 245 aa1.95□□□□□ -2.1
CLOCK-209ENST00000511124 GDF5OSQ5U4N7 250 aa1.95□□□□□ -2.1
CLOCK-209ENST00000511124 MRPL54Q6P161 138 aaKnown RBP1.95□□□□□ -2.1
CLOCK-209ENST00000511124 ATRAIDQ6UW56 229 aa1.95□□□□□ -2.1
CLOCK-209ENST00000511124 TEX43Q6ZNM6 134 aa1.95□□□□□ -2.1
CLOCK-209ENST00000511124 TMUB2Q71RG4 321 aa1.95□□□□□ -2.1
CLOCK-209ENST00000511124 ZFAND2AQ8N6M9 145 aa1.95□□□□□ -2.1
CLOCK-209ENST00000511124 OR10D4PQ8NGN7 298 aa1.95□□□□□ -2.1
CLOCK-209ENST00000511124 FXYD5Q96DB9 178 aa1.95□□□□□ -2.1
CLOCK-209ENST00000511124 C9orf85Q96MD7 179 aa1.95□□□□□ -2.1
CLOCK-209ENST00000511124 UBE2D4Q9Y2X8 147 aa1.95□□□□□ -2.1
CLOCK-209ENST00000511124 FRYLO94915 3013 aa1.95□□□□□ -2.1
CLOCK-209ENST00000511124 IGKV2-24A0A0C4DH68 120 aa1.95□□□□□ -2.1
CLOCK-209ENST00000511124 LRCOL1A6NCL2 159 aa1.95□□□□□ -2.1
CLOCK-209ENST00000511124 RNF222A6NCQ9 220 aa1.95□□□□□ -2.1
CLOCK-209ENST00000511124 H3BQ15 152 aa1.95□□□□□ -2.1
CLOCK-209ENST00000511124 NHLH2Q02577 135 aa1.95□□□□□ -2.1
CLOCK-209ENST00000511124 SPAG11BQ08648 103 aa1.95□□□□□ -2.1
CLOCK-209ENST00000511124 FCN2Q15485 313 aa1.95□□□□□ -2.1
CLOCK-209ENST00000511124 KRTAP19-1Q8IUB9 90 aa1.95□□□□□ -2.1
CLOCK-209ENST00000511124 C20orf173Q96LM9 149 aa1.95□□□□□ -2.1
CLOCK-209ENST00000511124 KIF25-AS1Q9Y6Z4 181 aa1.95□□□□□ -2.1
CLOCK-209ENST00000511124 ZNF815PA8K554 130 aa1.94□□□□□ -2.1
CLOCK-209ENST00000511124 HMSDA8MTL9 139 aa1.94□□□□□ -2.1
CLOCK-209ENST00000511124 BCL2L11O43521 198 aa1.94□□□□□ -2.1
CLOCK-209ENST00000511124 ZNF345Q14585 488 aa1.94□□□□□ -2.1
CLOCK-209ENST00000511124 JOSD1Q15040 202 aaPredicted RBP1.94□□□□□ -2.1
CLOCK-209ENST00000511124 WFDC10BQ8IUB3 73 aa1.94□□□□□ -2.1
CLOCK-209ENST00000511124 STPG4Q8N801 248 aa1.94□□□□□ -2.1
CLOCK-209ENST00000511124 SLC25A2Q9BXI2 301 aa1.94□□□□□ -2.1
CLOCK-209ENST00000511124 NXT2Q9NPJ8 142 aaKnown RBP1.94□□□□□ -2.1
CLOCK-209ENST00000511124 TMEM242Q9NWH2 141 aa1.94□□□□□ -2.1
CLOCK-209ENST00000511124 NAT8BQ9UHF3 227 aa1.94□□□□□ -2.1
CLOCK-209ENST00000511124 PDZD2O15018 2839 aa1.94□□□□□ -2.1
CLOCK-209ENST00000511124 F8WEM9 126 aa1.94□□□□□ -2.1
CLOCK-209ENST00000511124 GNRH2O43555 120 aa1.94□□□□□ -2.1
CLOCK-209ENST00000511124 HERVK_113P63121 156 aa1.94□□□□□ -2.1
CLOCK-209ENST00000511124 FABP9Q0Z7S8 132 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms