RNA–Protein interactions for RNA: ENST00000510557.5

LIN54-209, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 2 BASIC

Gene LIN54, Length 2,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-209ENST00000510557 M0QY20 66 aa14.14□□□□□ -0.15
LIN54-209ENST00000510557 IGHV4-59P01825 116 aa14.13□□□□□ -0.15
LIN54-209ENST00000510557 OPRPNQ99935 248 aaPredicted RBP14.13□□□□□ -0.15
LIN54-209ENST00000510557 DEFB112Q30KQ8 113 aa14.13□□□□□ -0.15
LIN54-209ENST00000510557 LINC01356Q8N9X3 169 aa14.13□□□□□ -0.15
LIN54-209ENST00000510557 FAM236AA0A1B0GUQ0 79 aa14.12□□□□□ -0.15
LIN54-209ENST00000510557 FAM236BA0A1B0GV22 79 aa14.12□□□□□ -0.15
LIN54-209ENST00000510557 J3QLI3 93 aa14.12□□□□□ -0.15
LIN54-209ENST00000510557 RNF152Q8N8N0 203 aa14.12□□□□□ -0.15
LIN54-209ENST00000510557 IMUPQ9GZP8 106 aa14.12□□□□□ -0.15
LIN54-209ENST00000510557 ZNF256Q9Y2P7 627 aaPredicted RBP14.12□□□□□ -0.15
LIN54-209ENST00000510557 TRGV11A0A075B6L2 103 aa14.12□□□□□ -0.15
LIN54-209ENST00000510557 TRAV12-2A0A075B6T6 113 aa14.12□□□□□ -0.15
LIN54-209ENST00000510557 LST1O00453 97 aa14.12□□□□□ -0.15
LIN54-209ENST00000510557 CLEC2BQ92478 149 aa14.12□□□□□ -0.15
LIN54-209ENST00000510557 PRSS2P07478 247 aa14.11□□□□□ -0.15
LIN54-209ENST00000510557 LITAFQ99732 161 aa14.11□□□□□ -0.15
LIN54-209ENST00000510557 IGKV3-20P01619 116 aa14.11□□□□□ -0.15
LIN54-209ENST00000510557 SPANXDQ9BXN6 97 aa14.11□□□□□ -0.15
LIN54-209ENST00000510557 A0A0J9YXV3 536 aa14.1□□□□□ -0.15
LIN54-209ENST00000510557 I3L3M4 83 aa14.1□□□□□ -0.15
LIN54-209ENST00000510557 ZFHX3Q15911 3703 aa14.1□□□□□ -0.15
LIN54-209ENST00000510557 ACYP1P07311 99 aa14.1□□□□□ -0.15
LIN54-209ENST00000510557 SPINK13Q1W4C9 94 aa14.1□□□□□ -0.15
LIN54-209ENST00000510557 DNAJC30Q96LL9 226 aa14.1□□□□□ -0.15
LIN54-209ENST00000510557 SPANXCQ9NY87 97 aa14.1□□□□□ -0.15
LIN54-209ENST00000510557 IGHV3-30-3P0DP02 117 aa14.09□□□□□ -0.15
LIN54-209ENST00000510557 C9orf153Q5TBE3 101 aa14.09□□□□□ -0.15
LIN54-209ENST00000510557 NRGNQ92686 78 aa14.09□□□□□ -0.15
LIN54-209ENST00000510557 SYNJ2BPP57105 145 aa14.08□□□□□ -0.15
LIN54-209ENST00000510557 TIMM21Q9BVV7 248 aa14.08□□□□□ -0.15
LIN54-209ENST00000510557 ADARB2-AS1A8MUL3 147 aa14.08□□□□□ -0.16
LIN54-209ENST00000510557 SPTAN1Q13813 2472 aaKnown RBP14.07□□□□□ -0.16
LIN54-209ENST00000510557 C3orf22Q8N5N4 141 aa14.07□□□□□ -0.16
LIN54-209ENST00000510557 C20orf203Q8NBC4 194 aa14.07□□□□□ -0.16
LIN54-209ENST00000510557 UBE2E2Q96LR5 201 aa14.07□□□□□ -0.16
LIN54-209ENST00000510557 LINC00694P0DN24 101 aa14.07□□□□□ -0.16
LIN54-209ENST00000510557 C10orf99Q6UWK7 81 aa14.07□□□□□ -0.16
LIN54-209ENST00000510557 MIAQ16674 131 aa14.06□□□□□ -0.16
LIN54-209ENST00000510557 NDUFA7O95182 113 aa14.06□□□□□ -0.16
LIN54-209ENST00000510557 SPXQ9BT56 116 aa14.06□□□□□ -0.16
LIN54-209ENST00000510557 EDA2RQ9HAV5 297 aa14.06□□□□□ -0.16
LIN54-209ENST00000510557 IGLV4-3A0A075B6K6 122 aa14.05□□□□□ -0.16
LIN54-209ENST00000510557 TRAV8-3A0A0A6YYJ7 113 aa14.04□□□□□ -0.16
LIN54-209ENST00000510557 ADAMTSL4-AS1Q5T5F5 129 aa14.04□□□□□ -0.16
LIN54-209ENST00000510557 UQCRQO14949 82 aa14.04□□□□□ -0.16
LIN54-209ENST00000510557 HOXD3P31249 432 aaPredicted RBP14.04□□□□□ -0.16
LIN54-209ENST00000510557 CSDC2Q9Y534 153 aaKnown RBP14.04□□□□□ -0.16
LIN54-209ENST00000510557 Q6ZSV7 163 aa14.03□□□□□ -0.16
LIN54-209ENST00000510557 TMEM61Q8N0U2 210 aa14.03□□□□□ -0.16
LIN54-209ENST00000510557 CEMP1Q6PRD7 247 aaPredicted RBP14.03□□□□□ -0.16
LIN54-209ENST00000510557 NDUFA12Q9UI09 145 aa14.03□□□□□ -0.16
LIN54-209ENST00000510557 ATP5G1P05496 136 aa14.02□□□□□ -0.17
LIN54-209ENST00000510557 NPC2P61916 151 aa14.02□□□□□ -0.17
LIN54-209ENST00000510557 LINC00643Q86TS7 51 aa14.02□□□□□ -0.17
LIN54-209ENST00000510557 PYGO1Q9Y3Y4 419 aa14.02□□□□□ -0.17
LIN54-209ENST00000510557 PRRC2AP48634 2157 aaKnown RBP14.01□□□□□ -0.17
LIN54-209ENST00000510557 LINC00526Q96FQ7 95 aa14.01□□□□□ -0.17
LIN54-209ENST00000510557 SPTBN4Q9H254 2564 aa14.01□□□□□ -0.17
LIN54-209ENST00000510557 IGHV1-58A0A0C4DH39 117 aa14.01□□□□□ -0.17
LIN54-209ENST00000510557 PIK3CD-AS1Q5SR53 167 aa14.01□□□□□ -0.17
LIN54-209ENST00000510557 HERVK_113P63121 156 aa14□□□□□ -0.17
LIN54-209ENST00000510557 Q6YL49 198 aa14□□□□□ -0.17
LIN54-209ENST00000510557 C5orf47Q569G3 176 aa13.99□□□□□ -0.17
LIN54-209ENST00000510557 NCOR2Q9Y618 2525 aa13.99□□□□□ -0.17
LIN54-209ENST00000510557 MRPS36P82909 103 aaKnown RBP13.99□□□□□ -0.17
LIN54-209ENST00000510557 LRRC75A-AS1Q8N1F1 130 aa13.99□□□□□ -0.17
LIN54-209ENST00000510557 DUX5Q96PT3 197 aa13.99□□□□□ -0.17
LIN54-209ENST00000510557 ZNF702PQ9H963 129 aa13.99□□□□□ -0.17
LIN54-209ENST00000510557 ITPR1Q14643 2758 aa13.99□□□□□ -0.17
LIN54-209ENST00000510557 CD28P10747 220 aa13.98□□□□□ -0.17
LIN54-209ENST00000510557 A0A096LNT2 108 aa13.98□□□□□ -0.17
LIN54-209ENST00000510557 J3KT08 172 aa13.98□□□□□ -0.17
LIN54-209ENST00000510557 SMCR5Q8TEV8 140 aa13.98□□□□□ -0.17
LIN54-209ENST00000510557 VPS13CQ709C8 3753 aa13.97□□□□□ -0.17
LIN54-209ENST00000510557 CELSR1Q9NYQ6 3014 aa13.97□□□□□ -0.17
LIN54-209ENST00000510557 A8MTW9 85 aa13.97□□□□□ -0.17
LIN54-209ENST00000510557 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.97□□□□□ -0.175e-8■■■■□ 22.3
LIN54-209ENST00000510557 CHD8Q9HCK8 2581 aa13.97□□□□□ -0.17
LIN54-209ENST00000510557 LOC107984640A0A0U1RRK4 108 aa13.95□□□□□ -0.18
LIN54-209ENST00000510557 A0A1B0GX51 115 aa13.95□□□□□ -0.18
LIN54-209ENST00000510557 VSIG2Q96IQ7 327 aa13.95□□□□□ -0.18
LIN54-209ENST00000510557 PEMTQ9UBM1 199 aa13.95□□□□□ -0.18
LIN54-209ENST00000510557 TIMM17BO60830 172 aa13.95□□□□□ -0.18
LIN54-209ENST00000510557 FSHBP01225 129 aa13.95□□□□□ -0.18
LIN54-209ENST00000510557 DEFB131AP59861 70 aa13.95□□□□□ -0.18
LIN54-209ENST00000510557 KNCNA6PVL3 124 aa13.94□□□□□ -0.18
LIN54-209ENST00000510557 HTN1P15515 57 aa13.94□□□□□ -0.18
LIN54-209ENST00000510557 CXCL5P42830 114 aa13.94□□□□□ -0.18
LIN54-209ENST00000510557 ZNF415Q09FC8 603 aa13.94□□□□□ -0.18
LIN54-209ENST00000510557 RBMY1A1P0DJD3 496 aaKnown RBP13.94□□□□□ -0.18
LIN54-209ENST00000510557 RBMY1CP0DJD4 496 aa13.94□□□□□ -0.18
LIN54-209ENST00000510557 RBMY1FQ15415 496 aaKnown RBP13.94□□□□□ -0.18
LIN54-209ENST00000510557 COX7CP15954 63 aa13.93□□□□□ -0.18
LIN54-209ENST00000510557 TINCRA0A1B0GVN0 87 aa13.92□□□□□ -0.18
LIN54-209ENST00000510557 COX7A2LO14548 114 aa13.92□□□□□ -0.18
LIN54-209ENST00000510557 SDIM1Q6ZPB5 146 aa13.92□□□□□ -0.18
LIN54-209ENST00000510557 KLK5Q9Y337 293 aaPredicted RBP13.92□□□□□ -0.18
LIN54-209ENST00000510557 IGHV3-73A0A0B4J1V6 119 aa13.91□□□□□ -0.18
LIN54-209ENST00000510557 SMIM9A6NGZ8 99 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms