RNA–Protein interactions for RNA: ENST00000510545.5

CLDND1-222, Transcript of claudin domain containing 1, human

APPRIS P1 TSL 5 BASIC

Gene CLDND1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-222	ENST00000510545	C20orf203	Q8NBC4	194 aa		11.56	□□□□□ -0.56
CLDND1-222	ENST00000510545	NMU	P48645	174 aa		11.56	□□□□□ -0.56
CLDND1-222	ENST00000510545	C2orf91	Q6ZV80	131 aa		11.56	□□□□□ -0.56
CLDND1-222	ENST00000510545	TIMM17A	Q99595	171 aa		11.56	□□□□□ -0.56
CLDND1-222	ENST00000510545	OPRPN	Q99935	248 aa	Predicted RBP	11.56	□□□□□ -0.56
CLDND1-222	ENST00000510545	BOD1L2	Q8IYS8	172 aa		11.55	□□□□□ -0.56
CLDND1-222	ENST00000510545	TRAV4	A0A0B4J268	109 aa		11.54	□□□□□ -0.56
CLDND1-222	ENST00000510545	IGHV3-38	A0A0C4DH36	116 aa		11.54	□□□□□ -0.56
CLDND1-222	ENST00000510545	TMEM141	Q96I45	108 aa		11.54	□□□□□ -0.56
CLDND1-222	ENST00000510545	OVOL2	Q9BRP0	275 aa		11.54	□□□□□ -0.56
CLDND1-222	ENST00000510545	TTTY13	Q9BZ97	58 aa		11.54	□□□□□ -0.56
CLDND1-222	ENST00000510545	GAGE12B	A1L429	117 aa		11.54	□□□□□ -0.56
CLDND1-222	ENST00000510545	LINC01549	A6NIU2	74 aa		11.54	□□□□□ -0.56
CLDND1-222	ENST00000510545	TAX1BP3	O14907	124 aa		11.54	□□□□□ -0.56
CLDND1-222	ENST00000510545	GAGE7	O76087	117 aa		11.54	□□□□□ -0.56
CLDND1-222	ENST00000510545	GAGE12F	P0CL80	117 aa		11.54	□□□□□ -0.56
CLDND1-222	ENST00000510545	GAGE12G	P0CL81	117 aa		11.54	□□□□□ -0.56
CLDND1-222	ENST00000510545	GAGE12I	P0CL82	117 aa		11.54	□□□□□ -0.56
CLDND1-222	ENST00000510545	PLN	P26678	52 aa		11.54	□□□□□ -0.56
CLDND1-222	ENST00000510545	CMYA5	Q8N3K9	4069 aa		11.54	□□□□□ -0.56
CLDND1-222	ENST00000510545	PHLDA1	Q8WV24	401 aa	Predicted RBP	11.53	□□□□□ -0.56
CLDND1-222	ENST00000510545	DNAJC30	Q96LL9	226 aa		11.53	□□□□□ -0.56
CLDND1-222	ENST00000510545	STAB1	Q9NY15	2570 aa		11.53	□□□□□ -0.56
CLDND1-222	ENST00000510545	CST9L	Q9H4G1	147 aa		11.53	□□□□□ -0.56
CLDND1-222	ENST00000510545	IGLV4-69	A0A075B6H9	119 aa		11.52	□□□□□ -0.57
CLDND1-222	ENST00000510545	EMP1	P54849	157 aa		11.52	□□□□□ -0.57
CLDND1-222	ENST00000510545	PMVK	Q15126	192 aa		11.52	□□□□□ -0.57
CLDND1-222	ENST00000510545	VAMP3	Q15836	100 aa		11.51	□□□□□ -0.57
CLDND1-222	ENST00000510545	FAM104A	Q969W3	186 aa		11.51	□□□□□ -0.57
CLDND1-222	ENST00000510545	CHCHD7	Q9BUK0	85 aa		11.51	□□□□□ -0.57
CLDND1-222	ENST00000510545	SLC25A29	Q8N8R3	303 aa		11.51	□□□□□ -0.57
CLDND1-222	ENST00000510545	ZNRF2	Q8NHG8	242 aa		11.51	□□□□□ -0.57
CLDND1-222	ENST00000510545		X6R8D5	127 aa		11.51	□□□□□ -0.57
CLDND1-222	ENST00000510545	TRGV2	A0A075B6R0	118 aa		11.5	□□□□□ -0.57
CLDND1-222	ENST00000510545		K7EQD1	137 aa		11.5	□□□□□ -0.57
CLDND1-222	ENST00000510545	WIPF1	O43516	503 aa		11.5	□□□□□ -0.57
CLDND1-222	ENST00000510545	CEMP1	Q6PRD7	247 aa	Predicted RBP	11.5	□□□□□ -0.57
CLDND1-222	ENST00000510545	IGLV4-3	A0A075B6K6	122 aa		11.49	□□□□□ -0.57
CLDND1-222	ENST00000510545	TRBV7-3	A0A075B6L6	115 aa		11.49	□□□□□ -0.57
CLDND1-222	ENST00000510545	C11orf86	A6NJI1	115 aa		11.49	□□□□□ -0.57
CLDND1-222	ENST00000510545	PRIMA1	Q86XR5	153 aa		11.48	□□□□□ -0.57
CLDND1-222	ENST00000510545	PKD1L1	Q8TDX9	2849 aa		11.48	□□□□□ -0.57
CLDND1-222	ENST00000510545	TMEM97	Q5BJF2	176 aa		11.48	□□□□□ -0.57
CLDND1-222	ENST00000510545	MAPKAPK5-AS1	Q8N8E1	139 aa		11.48	□□□□□ -0.57
CLDND1-222	ENST00000510545	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	11.47	□□□□□ -0.57
CLDND1-222	ENST00000510545	TRBV10-1	A0A0K0K1A3	114 aa		11.47	□□□□□ -0.57
CLDND1-222	ENST00000510545	IGKV2-29	A2NJV5	120 aa	Predicted RBP	11.47	□□□□□ -0.57
CLDND1-222	ENST00000510545	COTL1	Q14019	142 aa		11.47	□□□□□ -0.57
CLDND1-222	ENST00000510545	DEFB135	Q30KP9	77 aa		11.47	□□□□□ -0.57
CLDND1-222	ENST00000510545	PYGO1	Q9Y3Y4	419 aa		11.47	□□□□□ -0.57
CLDND1-222	ENST00000510545	TRAV8-6	A0A0B4J262	113 aa		11.46	□□□□□ -0.57
CLDND1-222	ENST00000510545	LOC100131303	A0A0U1RQF7	123 aa		11.46	□□□□□ -0.57
CLDND1-222	ENST00000510545	GAGE12J	A6NER3	117 aa		11.46	□□□□□ -0.57
CLDND1-222	ENST00000510545	GAGE4	Q13068	117 aa		11.46	□□□□□ -0.57
CLDND1-222	ENST00000510545	GAGE5	Q13069	117 aa		11.46	□□□□□ -0.57
CLDND1-222	ENST00000510545	GAGE13	Q4V321	117 aa		11.46	□□□□□ -0.57
CLDND1-222	ENST00000510545	MAST4	O15021	2626 aa		11.46	□□□□□ -0.58
CLDND1-222	ENST00000510545	UBE2D3	P61077	147 aa		11.45	□□□□□ -0.58
CLDND1-222	ENST00000510545	UBE2D2	P62837	147 aa		11.45	□□□□□ -0.58
CLDND1-222	ENST00000510545	SEC11A	P67812	179 aa		11.45	□□□□□ -0.58
CLDND1-222	ENST00000510545	RPL36A	P83881	106 aa	Known RBP	11.45	□□□□□ -0.58
CLDND1-222	ENST00000510545	OXLD1	Q5BKU9	147 aa		11.45	□□□□□ -0.58
CLDND1-222	ENST00000510545	KIR2DL5B	Q8NHK3	375 aa		11.45	□□□□□ -0.58
CLDND1-222	ENST00000510545	RPL36AL	Q969Q0	106 aa	Known RBP	11.45	□□□□□ -0.58
CLDND1-222	ENST00000510545	UBE2D4	Q9Y2X8	147 aa		11.45	□□□□□ -0.58
CLDND1-222	ENST00000510545	DEFB130B	P0DP73	79 aa		11.45	□□□□□ -0.58
CLDND1-222	ENST00000510545	DEFB130A	P0DP74	79 aa		11.45	□□□□□ -0.58
CLDND1-222	ENST00000510545	FHL2	Q14192	279 aa		11.45	□□□□□ -0.58
CLDND1-222	ENST00000510545	SIVA1	O15304	175 aa		11.44	□□□□□ -0.58
CLDND1-222	ENST00000510545	RNASE13	Q5GAN3	156 aa	Known RBP	11.44	□□□□□ -0.58
CLDND1-222	ENST00000510545	AMMECR1L	Q6DCA0	310 aa		11.44	□□□□□ -0.58
CLDND1-222	ENST00000510545	LINC00612	Q8N6U2	182 aa		11.44	□□□□□ -0.58
CLDND1-222	ENST00000510545	VCX2	Q9H322	139 aa		11.44	□□□□□ -0.58
CLDND1-222	ENST00000510545		K7EP13	123 aa		11.44	□□□□□ -0.58
CLDND1-222	ENST00000510545	NTM-AS1	Q6ZSK4	140 aa		11.44	□□□□□ -0.58
CLDND1-222	ENST00000510545	AMELX	Q99217	191 aa		11.44	□□□□□ -0.58
CLDND1-222	ENST00000510545	ANK2	Q01484	3957 aa		11.44	□□□□□ -0.58
CLDND1-222	ENST00000510545	TRGV4	A0A0C4DH28	118 aa		11.43	□□□□□ -0.58
CLDND1-222	ENST00000510545	TRBV6-4	A0A1B0GX49	114 aa		11.43	□□□□□ -0.58
CLDND1-222	ENST00000510545	SMIM9	A6NGZ8	99 aa		11.43	□□□□□ -0.58
CLDND1-222	ENST00000510545		E9PLD3	99 aa		11.43	□□□□□ -0.58
CLDND1-222	ENST00000510545	APOC4	P55056	127 aa		11.43	□□□□□ -0.58
CLDND1-222	ENST00000510545	C3orf56	Q8N813	242 aa		11.43	□□□□□ -0.58
CLDND1-222	ENST00000510545	CBY1	Q9Y3M2	126 aa		11.43	□□□□□ -0.58
CLDND1-222	ENST00000510545	TRBV25-1	A0A075B6N4	114 aa		11.42	□□□□□ -0.58
CLDND1-222	ENST00000510545	IGHV4-30-4	P0DP06	118 aa		11.42	□□□□□ -0.58
CLDND1-222	ENST00000510545	PRADC1	Q9BSG0	188 aa		11.42	□□□□□ -0.58
CLDND1-222	ENST00000510545		A0A0J9YXV3	536 aa		11.42	□□□□□ -0.58
CLDND1-222	ENST00000510545	DEFB4A	O15263	64 aa		11.42	□□□□□ -0.58
CLDND1-222	ENST00000510545	KRTAP10-11	P60412	298 aa		11.42	□□□□□ -0.58
CLDND1-222	ENST00000510545	HSD52	Q0P140	79 aa		11.42	□□□□□ -0.58
CLDND1-222	ENST00000510545	PAPPA-AS1	Q5QFB9	102 aa		11.42	□□□□□ -0.58
CLDND1-222	ENST00000510545	DAZ4	Q86SG3	579 aa	Known RBP	11.42	□□□□□ -0.58
CLDND1-222	ENST00000510545	NFE4	Q86UQ8	179 aa		11.42	□□□□□ -0.58
CLDND1-222	ENST00000510545	DAZ3	Q9NR90	486 aa	Known RBP	11.42	□□□□□ -0.58
CLDND1-222	ENST00000510545	CIDEA	O60543	219 aa		11.41	□□□□□ -0.58
CLDND1-222	ENST00000510545	TMEM170B	Q5T4T1	132 aa		11.41	□□□□□ -0.58
CLDND1-222	ENST00000510545		Q6ZUT4	128 aa		11.41	□□□□□ -0.58
CLDND1-222	ENST00000510545	OR11H2	Q8NH07	326 aa		11.41	□□□□□ -0.58
CLDND1-222	ENST00000510545	CHAC1	Q9BUX1	264 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 237 ms