RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 A0A1B0GUV1 79 aa9.91□□□□□ -0.82
TPM3-219ENST00000509409 COTL1Q14019 142 aa9.91□□□□□ -0.82
TPM3-219ENST00000509409 WDR73Q6P4I2 378 aa9.91□□□□□ -0.82
TPM3-219ENST00000509409 C9orf62Q8N4C0 152 aa9.91□□□□□ -0.82
TPM3-219ENST00000509409 AP5S1Q9NUS5 200 aa9.91□□□□□ -0.82
TPM3-219ENST00000509409 TRBV20OR9-2A0A075B6H5 130 aa9.9□□□□□ -0.82
TPM3-219ENST00000509409 AMTP48728 403 aa9.9□□□□□ -0.82
TPM3-219ENST00000509409 SDIM1Q6ZPB5 146 aa9.9□□□□□ -0.82
TPM3-219ENST00000509409 SLC51BQ86UW2 128 aa9.9□□□□□ -0.82
TPM3-219ENST00000509409 PGLYRP4Q96LB8 373 aa9.9□□□□□ -0.82
TPM3-219ENST00000509409 LRP1Q07954 4544 aaKnown RBP9.89□□□□□ -0.83
TPM3-219ENST00000509409 TAGLN2P37802 199 aaKnown RBP9.89□□□□□ -0.83
TPM3-219ENST00000509409 SMIM15Q7Z3B0 74 aa9.89□□□□□ -0.83
TPM3-219ENST00000509409 GFRA4Q9GZZ7 299 aa9.89□□□□□ -0.83
TPM3-219ENST00000509409 RNASE7Q9H1E1 156 aaKnown RBP9.89□□□□□ -0.83
TPM3-219ENST00000509409 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.89□□□□□ -0.83
TPM3-219ENST00000509409 FAT3Q8TDW7 4589 aa9.88□□□□□ -0.83
TPM3-219ENST00000509409 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.88□□□□□ -0.83
TPM3-219ENST00000509409 IGKV3OR2-268A0A0C4DH90 116 aa9.88□□□□□ -0.83
TPM3-219ENST00000509409 SERTAD4-AS1Q5TG53 156 aa9.88□□□□□ -0.83
TPM3-219ENST00000509409 OCC1Q8TAD7 63 aa9.88□□□□□ -0.83
TPM3-219ENST00000509409 RPP21Q9H633 154 aaKnown RBP9.88□□□□□ -0.83
TPM3-219ENST00000509409 IGHV3-64A0A075B6Q5 118 aa9.87□□□□□ -0.83
TPM3-219ENST00000509409 TRAV26-2A0A0B4J265 109 aa9.87□□□□□ -0.83
TPM3-219ENST00000509409 PANO1I0J062 215 aa9.87□□□□□ -0.83
TPM3-219ENST00000509409 CTRLP40313 264 aa9.87□□□□□ -0.83
TPM3-219ENST00000509409 CNBPP62633 177 aaKnown RBP9.87□□□□□ -0.83
TPM3-219ENST00000509409 TCTE3Q8IZS6 198 aa9.87□□□□□ -0.83
TPM3-219ENST00000509409 GATD1Q8NB37 220 aa9.87□□□□□ -0.83
TPM3-219ENST00000509409 AMMECR1LQ6DCA0 310 aa9.86□□□□□ -0.83
TPM3-219ENST00000509409 CFAP161Q6P656 301 aa9.86□□□□□ -0.83
TPM3-219ENST00000509409 PKHD1L1Q86WI1 4243 aa9.86□□□□□ -0.83
TPM3-219ENST00000509409 GAGE12HA6NDE8 117 aa9.85□□□□□ -0.83
TPM3-219ENST00000509409 K7EN84 100 aa9.85□□□□□ -0.83
TPM3-219ENST00000509409 GATCO43716 136 aaKnown RBP9.84□□□□□ -0.83
TPM3-219ENST00000509409 RNASEKQ6P5S7 137 aaKnown RBP9.84□□□□□ -0.83
TPM3-219ENST00000509409 CNFNQ9BYD5 112 aa9.84□□□□□ -0.83
TPM3-219ENST00000509409 SLPIP03973 132 aa9.83□□□□□ -0.84
TPM3-219ENST00000509409 HNRNPA3P51991 378 aaKnown RBP9.83□□□□□ -0.84
TPM3-219ENST00000509409 CEBPGP53567 150 aa9.83□□□□□ -0.84
TPM3-219ENST00000509409 FOXA3P55318 350 aaPredicted RBP9.83□□□□□ -0.84
TPM3-219ENST00000509409 RPL39LQ96EH5 51 aaKnown RBP9.83□□□□□ -0.84
TPM3-219ENST00000509409 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.82□□□□□ -0.84
TPM3-219ENST00000509409 IGKV2-29A2NJV5 120 aaPredicted RBP9.82□□□□□ -0.84
TPM3-219ENST00000509409 NCR2O95944 276 aa9.82□□□□□ -0.84
TPM3-219ENST00000509409 APCSP02743 223 aa9.82□□□□□ -0.84
TPM3-219ENST00000509409 PMCHP20382 165 aa9.82□□□□□ -0.84
TPM3-219ENST00000509409 BLOC1S1P78537 153 aa9.82□□□□□ -0.84
TPM3-219ENST00000509409 TEX261Q6UWH6 196 aa9.82□□□□□ -0.84
TPM3-219ENST00000509409 Q6ZNX1 250 aa9.82□□□□□ -0.84
TPM3-219ENST00000509409 GTSF1Q8WW33 167 aa9.82□□□□□ -0.84
TPM3-219ENST00000509409 A8MWL6 223 aa9.81□□□□□ -0.84
TPM3-219ENST00000509409 CHTF8P0CG12 524 aa9.81□□□□□ -0.84
TPM3-219ENST00000509409 HIGD2BQ4VC39 106 aa9.81□□□□□ -0.84
TPM3-219ENST00000509409 CHCHD10Q8WYQ3 142 aaPredicted RBP9.81□□□□□ -0.84
TPM3-219ENST00000509409 RNF185Q96GF1 192 aa9.81□□□□□ -0.84
TPM3-219ENST00000509409 A0A087WYN8 130 aa9.8□□□□□ -0.84
TPM3-219ENST00000509409 SDHAF1A6NFY7 115 aa9.8□□□□□ -0.84
TPM3-219ENST00000509409 H7C423 109 aa9.8□□□□□ -0.84
TPM3-219ENST00000509409 RPS10P46783 165 aaKnown RBP9.8□□□□□ -0.84
TPM3-219ENST00000509409 CIRBPQ14011 172 aaKnown RBP9.8□□□□□ -0.84
TPM3-219ENST00000509409 BORCS7Q96B45 105 aa9.8□□□□□ -0.84
TPM3-219ENST00000509409 TMEM250H0YL14 139 aa9.79□□□□□ -0.84
TPM3-219ENST00000509409 FGF6P10767 208 aa9.79□□□□□ -0.84
TPM3-219ENST00000509409 SMCPP49901 116 aaPredicted RBP9.79□□□□□ -0.84
TPM3-219ENST00000509409 ALKAL2Q6UX46 152 aa9.79□□□□□ -0.84
TPM3-219ENST00000509409 C15orf56Q8N910 161 aa9.79□□□□□ -0.84
TPM3-219ENST00000509409 TMEM101Q96IK0 257 aa9.79□□□□□ -0.84
TPM3-219ENST00000509409 BTF3L4Q96K17 158 aa9.79□□□□□ -0.84
TPM3-219ENST00000509409 I3L3M4 83 aa9.78□□□□□ -0.84
TPM3-219ENST00000509409 COX6A2Q02221 97 aa9.78□□□□□ -0.84
TPM3-219ENST00000509409 FAM231DQ6ZW35 169 aa9.78□□□□□ -0.84
TPM3-219ENST00000509409 SPACA4Q8TDM5 124 aa9.78□□□□□ -0.84
TPM3-219ENST00000509409 PLA2G2DQ9UNK4 145 aa9.78□□□□□ -0.84
TPM3-219ENST00000509409 MAJINQ3KP22 176 aa9.77□□□□□ -0.85
TPM3-219ENST00000509409 LCE2CQ5TA81 110 aa9.77□□□□□ -0.85
TPM3-219ENST00000509409 Q6ZRU5 148 aa9.77□□□□□ -0.85
TPM3-219ENST00000509409 AKAP14Q86UN6 197 aa9.77□□□□□ -0.85
TPM3-219ENST00000509409 C7orf33Q8WU49 177 aa9.77□□□□□ -0.85
TPM3-219ENST00000509409 ST20Q9HBF5 79 aa9.77□□□□□ -0.85
TPM3-219ENST00000509409 HMCN2Q8NDA2 5059 aa9.76□□□□□ -0.85
TPM3-219ENST00000509409 IGKV2-24A0A0C4DH68 120 aa9.76□□□□□ -0.85
TPM3-219ENST00000509409 NDUFS6O75380 124 aaKnown RBP9.76□□□□□ -0.85
TPM3-219ENST00000509409 OR5A1Q8NGJ0 315 aa9.76□□□□□ -0.85
TPM3-219ENST00000509409 EIF5A2Q9GZV4 153 aaKnown RBP9.76□□□□□ -0.85
TPM3-219ENST00000509409 ZNF25P17030 456 aaPredicted RBP9.75□□□□□ -0.85
TPM3-219ENST00000509409 XCL1P47992 114 aa9.75□□□□□ -0.85
TPM3-219ENST00000509409 PRSS3P2Q8NHM4 247 aa9.75□□□□□ -0.85
TPM3-219ENST00000509409 PLAC8Q9NZF1 115 aa9.75□□□□□ -0.85
TPM3-219ENST00000509409 hCG_2014768A0A024R1R8 64 aa9.74□□□□□ -0.85
TPM3-219ENST00000509409 TRBV6-5A0A0K0K1A5 114 aa9.74□□□□□ -0.85
TPM3-219ENST00000509409 A0A1B0GUT8 65 aa9.74□□□□□ -0.85
TPM3-219ENST00000509409 FAM231BA6NCW3 169 aa9.74□□□□□ -0.85
TPM3-219ENST00000509409 PHOX2AO14813 284 aa9.74□□□□□ -0.85
TPM3-219ENST00000509409 FOXI1Q12951 378 aa9.74□□□□□ -0.85
TPM3-219ENST00000509409 CT83Q5H943 113 aa9.74□□□□□ -0.85
TPM3-219ENST00000509409 SMIM7Q9BQ49 75 aa9.74□□□□□ -0.85
TPM3-219ENST00000509409 TMEM242Q9NWH2 141 aa9.74□□□□□ -0.85
TPM3-219ENST00000509409 LINC00959A0A1B0GUT2 108 aa9.73□□□□□ -0.85
TPM3-219ENST00000509409 HIGD1CA8MV81 97 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms