RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 UPK3BQ9BT76 320 aa10.05□□□□□ -0.8
HMGCL-208ENST00000509389 MAP1LC3AQ9H492 121 aa10.05□□□□□ -0.8
HMGCL-208ENST00000509389 ZNF56Q15929 161 aa10.04□□□□□ -0.8
HMGCL-208ENST00000509389 TTC32Q5I0X7 151 aa10.04□□□□□ -0.8
HMGCL-208ENST00000509389 BAGE3Q86Y29 109 aa10.04□□□□□ -0.8
HMGCL-208ENST00000509389 RPL39LQ96EH5 51 aaKnown RBP10.04□□□□□ -0.8
HMGCL-208ENST00000509389 ZNF479Q96JC4 524 aa10.04□□□□□ -0.8
HMGCL-208ENST00000509389 SMIM2Q9BVW6 85 aa10.04□□□□□ -0.8
HMGCL-208ENST00000509389 H7C1H1 209 aa10.03□□□□□ -0.8
HMGCL-208ENST00000509389 POLR2KP53803 58 aaKnown RBP10.03□□□□□ -0.8
HMGCL-208ENST00000509389 SUMO2P61956 95 aaKnown RBP10.03□□□□□ -0.8
HMGCL-208ENST00000509389 Q6ZSN1 163 aa10.03□□□□□ -0.8
HMGCL-208ENST00000509389 SPATA12Q7Z6I5 190 aa10.03□□□□□ -0.8
HMGCL-208ENST00000509389 OR4C5Q8NGB2 326 aa10.03□□□□□ -0.8
HMGCL-208ENST00000509389 VSIG2Q96IQ7 327 aa10.03□□□□□ -0.8
HMGCL-208ENST00000509389 NXT2Q9NPJ8 142 aaKnown RBP10.03□□□□□ -0.8
HMGCL-208ENST00000509389 MRPS16Q9Y3D3 137 aaKnown RBP10.03□□□□□ -0.8
HMGCL-208ENST00000509389 NIT1Q86X76 327 aa10.02□□□□□ -0.8
HMGCL-208ENST00000509389 MAPKAPK5-AS1Q8N8E1 139 aa10.02□□□□□ -0.8
HMGCL-208ENST00000509389 Q8N8P6 123 aa10.02□□□□□ -0.8
HMGCL-208ENST00000509389 NIT2Q9NQR4 276 aa10.02□□□□□ -0.8
HMGCL-208ENST00000509389 APOBP04114 4563 aaKnown RBP10.02□□□□□ -0.81
HMGCL-208ENST00000509389 DNAH5Q8TE73 4624 aa10.02□□□□□ -0.81
HMGCL-208ENST00000509389 TRBV10-1A0A0K0K1A3 114 aa10.01□□□□□ -0.81
HMGCL-208ENST00000509389 TRBV27A0A0K0K1C4 114 aa10.01□□□□□ -0.81
HMGCL-208ENST00000509389 K7EMI3 77 aa10.01□□□□□ -0.81
HMGCL-208ENST00000509389 LINC00614P0C842 121 aa10.01□□□□□ -0.81
HMGCL-208ENST00000509389 IFI27P40305 119 aaPredicted RBP10.01□□□□□ -0.81
HMGCL-208ENST00000509389 HIST1H2BLQ99880 126 aa10.01□□□□□ -0.81
HMGCL-208ENST00000509389 TMEM70Q9BUB7 260 aa10.01□□□□□ -0.81
HMGCL-208ENST00000509389 AP5S1Q9NUS5 200 aa10.01□□□□□ -0.81
HMGCL-208ENST00000509389 TRGV2A0A075B6R0 118 aa10.01□□□□□ -0.81
HMGCL-208ENST00000509389 A0A096LNJ9 63 aa10.01□□□□□ -0.81
HMGCL-208ENST00000509389 A0A096LPF7 62 aa10.01□□□□□ -0.81
HMGCL-208ENST00000509389 TRBV6-4A0A1B0GX49 114 aa10.01□□□□□ -0.81
HMGCL-208ENST00000509389 F5H697 171 aa10.01□□□□□ -0.81
HMGCL-208ENST00000509389 PMCHP20382 165 aa10.01□□□□□ -0.81
HMGCL-208ENST00000509389 DNAJC30Q96LL9 226 aa10.01□□□□□ -0.81
HMGCL-208ENST00000509389 LINC00694P0DN24 101 aa10□□□□□ -0.81
HMGCL-208ENST00000509389 BTF3P20290 206 aaKnown RBP10□□□□□ -0.81
HMGCL-208ENST00000509389 KRTAP10-2P60368 255 aa10□□□□□ -0.81
HMGCL-208ENST00000509389 FHL2Q14192 279 aa10□□□□□ -0.81
HMGCL-208ENST00000509389 RNASEKQ6P5S7 137 aaKnown RBP10□□□□□ -0.81
HMGCL-208ENST00000509389 NEXN-AS1Q8NBZ9 246 aa10□□□□□ -0.81
HMGCL-208ENST00000509389 IGHV3-73A0A0B4J1V6 119 aa9.99□□□□□ -0.81
HMGCL-208ENST00000509389 IGHV1-24A0A0C4DH33 117 aa9.99□□□□□ -0.81
HMGCL-208ENST00000509389 SDHAF1A6NFY7 115 aa9.99□□□□□ -0.81
HMGCL-208ENST00000509389 K7EQD1 137 aa9.99□□□□□ -0.81
HMGCL-208ENST00000509389 HSBP1O75506 76 aa9.99□□□□□ -0.81
HMGCL-208ENST00000509389 PRSS3P2Q8NHM4 247 aa9.99□□□□□ -0.81
HMGCL-208ENST00000509389 ST20Q9HBF5 79 aa9.99□□□□□ -0.81
HMGCL-208ENST00000509389 LOC389332A0A1B0GUA5 103 aa9.98□□□□□ -0.81
HMGCL-208ENST00000509389 FA2HQ7L5A8 372 aa9.98□□□□□ -0.81
HMGCL-208ENST00000509389 SLC25A29Q8N8R3 303 aa9.98□□□□□ -0.81
HMGCL-208ENST00000509389 TMEM18Q96B42 140 aa9.98□□□□□ -0.81
HMGCL-208ENST00000509389 Q9UF83 564 aa9.98□□□□□ -0.81
HMGCL-208ENST00000509389 PDZD11Q5EBL8 140 aa9.97□□□□□ -0.81
HMGCL-208ENST00000509389 Q8N1X5 172 aa9.97□□□□□ -0.81
HMGCL-208ENST00000509389 VCYO14598 125 aa9.96□□□□□ -0.82
HMGCL-208ENST00000509389 PAX4O43316 350 aa9.96□□□□□ -0.82
HMGCL-208ENST00000509389 S100A2P29034 98 aa9.96□□□□□ -0.82
HMGCL-208ENST00000509389 AMTP48728 403 aa9.96□□□□□ -0.82
HMGCL-208ENST00000509389 RHOHQ15669 191 aa9.96□□□□□ -0.82
HMGCL-208ENST00000509389 SIVA1O15304 175 aa9.95□□□□□ -0.82
HMGCL-208ENST00000509389 FABP4P15090 132 aa9.95□□□□□ -0.82
HMGCL-208ENST00000509389 Q6ZRN7 208 aaPredicted RBP9.95□□□□□ -0.82
HMGCL-208ENST00000509389 ICOSQ9Y6W8 199 aa9.95□□□□□ -0.82
HMGCL-208ENST00000509389 TCAPO15273 167 aa9.94□□□□□ -0.82
HMGCL-208ENST00000509389 TSHBP01222 138 aa9.94□□□□□ -0.82
HMGCL-208ENST00000509389 HBDP02042 147 aa9.94□□□□□ -0.82
HMGCL-208ENST00000509389 CRYBA4P53673 196 aa9.94□□□□□ -0.82
HMGCL-208ENST00000509389 UBE2D3P61077 147 aa9.94□□□□□ -0.82
HMGCL-208ENST00000509389 UBE2D2P62837 147 aa9.94□□□□□ -0.82
HMGCL-208ENST00000509389 LAGE3Q14657 143 aa9.94□□□□□ -0.82
HMGCL-208ENST00000509389 ORMDL2Q53FV1 153 aa9.94□□□□□ -0.82
HMGCL-208ENST00000509389 FAM19A2Q8N3H0 131 aa9.94□□□□□ -0.82
HMGCL-208ENST00000509389 TRBV7-3A0A075B6L6 115 aa9.93□□□□□ -0.82
HMGCL-208ENST00000509389 TRGV4A0A0C4DH28 118 aa9.93□□□□□ -0.82
HMGCL-208ENST00000509389 I3L3M4 83 aa9.93□□□□□ -0.82
HMGCL-208ENST00000509389 FCER1GP30273 86 aa9.93□□□□□ -0.82
HMGCL-208ENST00000509389 PRO0255Q9UI72 69 aa9.93□□□□□ -0.82
HMGCL-208ENST00000509389 RPL36AP83881 106 aaKnown RBP9.92□□□□□ -0.82
HMGCL-208ENST00000509389 PMCHL1Q16048 86 aa9.92□□□□□ -0.82
HMGCL-208ENST00000509389 RPL36ALQ969Q0 106 aaKnown RBP9.92□□□□□ -0.82
HMGCL-208ENST00000509389 HHLA3Q9XRX5 114 aa9.92□□□□□ -0.82
HMGCL-208ENST00000509389 TNFRSF18Q9Y5U5 241 aa9.92□□□□□ -0.82
HMGCL-208ENST00000509389 LYPD5Q6UWN5 251 aa9.91□□□□□ -0.82
HMGCL-208ENST00000509389 NEGR1Q7Z3B1 354 aa9.91□□□□□ -0.82
HMGCL-208ENST00000509389 KIR2DL4Q99706 377 aa9.91□□□□□ -0.82
HMGCL-208ENST00000509389 LINC01549A6NIU2 74 aa9.9□□□□□ -0.82
HMGCL-208ENST00000509389 MRPL23Q16540 153 aaKnown RBP9.9□□□□□ -0.82
HMGCL-208ENST00000509389 DAZ4Q86SG3 579 aaKnown RBP9.9□□□□□ -0.82
HMGCL-208ENST00000509389 OR10D4PQ8NGN7 298 aa9.9□□□□□ -0.82
HMGCL-208ENST00000509389 PRADC1Q9BSG0 188 aa9.9□□□□□ -0.82
HMGCL-208ENST00000509389 DAZ3Q9NR90 486 aaKnown RBP9.9□□□□□ -0.82
HMGCL-208ENST00000509389 LOC100131303A0A0U1RQF7 123 aa9.89□□□□□ -0.83
HMGCL-208ENST00000509389 TOMM6Q96B49 74 aa9.89□□□□□ -0.83
HMGCL-208ENST00000509389 LEPROTL1O95214 131 aa9.88□□□□□ -0.83
HMGCL-208ENST00000509389 FUSP35637 526 aaKnown RBP eCLIP9.88□□□□□ -0.83
HMGCL-208ENST00000509389 LINC00173Q6ZV60 143 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms