RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 IGLV4-69A0A075B6H9 119 aa10.68□□□□□ -0.7
PHF3-209ENST00000509330 CSNK1G2-AS1Q8NCQ2 148 aa10.68□□□□□ -0.7
PHF3-209ENST00000509330 CMC4P56277 68 aaPredicted RBP10.67□□□□□ -0.7
PHF3-209ENST00000509330 PLAC8L1A1L4L8 177 aa10.67□□□□□ -0.7
PHF3-209ENST00000509330 GAGE12JA6NER3 117 aa10.67□□□□□ -0.7
PHF3-209ENST00000509330 RHODO00212 210 aa10.67□□□□□ -0.7
PHF3-209ENST00000509330 DEFB4AO15263 64 aa10.67□□□□□ -0.7
PHF3-209ENST00000509330 DEFB130BP0DP73 79 aa10.67□□□□□ -0.7
PHF3-209ENST00000509330 DEFB130AP0DP74 79 aa10.67□□□□□ -0.7
PHF3-209ENST00000509330 FOSL1P15407 271 aa10.67□□□□□ -0.7
PHF3-209ENST00000509330 GAGE1Q13065 139 aa10.67□□□□□ -0.7
PHF3-209ENST00000509330 GAGE4Q13068 117 aa10.67□□□□□ -0.7
PHF3-209ENST00000509330 GAGE5Q13069 117 aa10.67□□□□□ -0.7
PHF3-209ENST00000509330 GAGE13Q4V321 117 aa10.67□□□□□ -0.7
PHF3-209ENST00000509330 TMEM97Q5BJF2 176 aa10.67□□□□□ -0.7
PHF3-209ENST00000509330 C12orf54Q6X4T0 127 aa10.67□□□□□ -0.7
PHF3-209ENST00000509330 NAA38Q9BRA0 125 aaKnown RBP10.67□□□□□ -0.7
PHF3-209ENST00000509330 LOC100131303A0A0U1RQF7 123 aa10.66□□□□□ -0.7
PHF3-209ENST00000509330 RHOHQ15669 191 aa10.66□□□□□ -0.7
PHF3-209ENST00000509330 IL17DQ8TAD2 202 aa10.66□□□□□ -0.7
PHF3-209ENST00000509330 TRBV25-1A0A075B6N4 114 aa10.66□□□□□ -0.7
PHF3-209ENST00000509330 TIMM17AQ99595 171 aa10.66□□□□□ -0.7
PHF3-209ENST00000509330 GCSHP23434 173 aa10.65□□□□□ -0.7
PHF3-209ENST00000509330 SLC25A29Q8N8R3 303 aa10.65□□□□□ -0.7
PHF3-209ENST00000509330 OR11H2Q8NH07 326 aa10.65□□□□□ -0.7
PHF3-209ENST00000509330 PRADC1Q9BSG0 188 aa10.65□□□□□ -0.7
PHF3-209ENST00000509330 CYSRT1A8MQ03 144 aa10.65□□□□□ -0.7
PHF3-209ENST00000509330 LURAP1LQ8IV03 231 aa10.65□□□□□ -0.7
PHF3-209ENST00000509330 CITED1Q99966 193 aa10.65□□□□□ -0.7
PHF3-209ENST00000509330 C1QTNF4Q9BXJ3 329 aa10.65□□□□□ -0.7
PHF3-209ENST00000509330 TMEM141Q96I45 108 aa10.65□□□□□ -0.71
PHF3-209ENST00000509330 IGLV4-3A0A075B6K6 122 aa10.64□□□□□ -0.71
PHF3-209ENST00000509330 C9orf66Q5T8R8 295 aa10.64□□□□□ -0.71
PHF3-209ENST00000509330 RAB37Q96AX2 223 aa10.64□□□□□ -0.71
PHF3-209ENST00000509330 C16orf74Q96GX8 76 aa10.64□□□□□ -0.71
PHF3-209ENST00000509330 CHAC1Q9BUX1 264 aa10.64□□□□□ -0.71
PHF3-209ENST00000509330 A0A0J9YXV3 536 aa10.64□□□□□ -0.71
PHF3-209ENST00000509330 COTL1Q14019 142 aa10.64□□□□□ -0.71
PHF3-209ENST00000509330 VCX2Q9H322 139 aa10.64□□□□□ -0.71
PHF3-209ENST00000509330 PKD1L1Q8TDX9 2849 aa10.64□□□□□ -0.71
PHF3-209ENST00000509330 NPSP0C0P6 89 aa10.63□□□□□ -0.71
PHF3-209ENST00000509330 DEFB135Q30KP9 77 aa10.63□□□□□ -0.71
PHF3-209ENST00000509330 CHCHD7Q9BUK0 85 aa10.63□□□□□ -0.71
PHF3-209ENST00000509330 FAM110AQ9BQ89 295 aa10.63□□□□□ -0.71
PHF3-209ENST00000509330 K7EQD1 137 aa10.62□□□□□ -0.71
PHF3-209ENST00000509330 PIK3CD-AS1Q5SR53 167 aa10.62□□□□□ -0.71
PHF3-209ENST00000509330 LINC00469Q8N7U9 141 aa10.62□□□□□ -0.71
PHF3-209ENST00000509330 TAX1BP3O14907 124 aa10.62□□□□□ -0.71
PHF3-209ENST00000509330 TRAV4A0A0B4J268 109 aa10.61□□□□□ -0.71
PHF3-209ENST00000509330 TRGV4A0A0C4DH28 118 aa10.61□□□□□ -0.71
PHF3-209ENST00000509330 Q6ZUT4 128 aa10.61□□□□□ -0.71
PHF3-209ENST00000509330 TRBV7-3A0A075B6L6 115 aa10.61□□□□□ -0.71
PHF3-209ENST00000509330 ZNF815PA8K554 130 aa10.61□□□□□ -0.71
PHF3-209ENST00000509330 FXYD2P54710 66 aa10.61□□□□□ -0.71
PHF3-209ENST00000509330 HSD52Q0P140 79 aa10.61□□□□□ -0.71
PHF3-209ENST00000509330 PTH2Q96A98 100 aa10.61□□□□□ -0.71
PHF3-209ENST00000509330 COX11Q9Y6N1 276 aa10.61□□□□□ -0.71
PHF3-209ENST00000509330 K7ERJ3 54 aa10.6□□□□□ -0.71
PHF3-209ENST00000509330 DLEU1O43261 78 aa10.6□□□□□ -0.71
PHF3-209ENST00000509330 DAZ2Q13117 558 aaKnown RBP10.6□□□□□ -0.71
PHF3-209ENST00000509330 ORAOV1Q8WV07 137 aa10.6□□□□□ -0.71
PHF3-209ENST00000509330 FAM104AQ969W3 186 aa10.6□□□□□ -0.71
PHF3-209ENST00000509330 PLEKHB2Q96CS7 222 aa10.6□□□□□ -0.71
PHF3-209ENST00000509330 EDA2RQ9HAV5 297 aa10.6□□□□□ -0.71
PHF3-209ENST00000509330 COL6A5A8TX70 2615 aa10.6□□□□□ -0.71
PHF3-209ENST00000509330 LINC00694P0DN24 101 aa10.6□□□□□ -0.71
PHF3-209ENST00000509330 TSPEAR-AS2P59090 65 aa10.6□□□□□ -0.71
PHF3-209ENST00000509330 RPL36AP83881 106 aaKnown RBP10.6□□□□□ -0.71
PHF3-209ENST00000509330 RPL36ALQ969Q0 106 aaKnown RBP10.6□□□□□ -0.71
PHF3-209ENST00000509330 SCGB1D4Q6XE38 83 aa10.59□□□□□ -0.71
PHF3-209ENST00000509330 E9PLD3 99 aa10.59□□□□□ -0.71
PHF3-209ENST00000509330 PTTG1IPP53801 180 aa10.59□□□□□ -0.71
PHF3-209ENST00000509330 OXLD1Q5BKU9 147 aa10.59□□□□□ -0.71
PHF3-209ENST00000509330 UBE2D4Q9Y2X8 147 aa10.59□□□□□ -0.71
PHF3-209ENST00000509330 MYMXA0A1B0GTQ4 84 aa10.59□□□□□ -0.71
PHF3-209ENST00000509330 VAMP3Q15836 100 aa10.59□□□□□ -0.71
PHF3-209ENST00000509330 KRTAP24-1Q3LI83 254 aa10.59□□□□□ -0.71
PHF3-209ENST00000509330 INSL3P51460 131 aa10.58□□□□□ -0.72
PHF3-209ENST00000509330 DGAT2L7PQ6IED9 249 aa10.58□□□□□ -0.72
PHF3-209ENST00000509330 HIST1H4GQ99525 98 aa10.58□□□□□ -0.72
PHF3-209ENST00000509330 NTM-AS1Q6ZSK4 140 aa10.58□□□□□ -0.72
PHF3-209ENST00000509330 SIVA1O15304 175 aa10.57□□□□□ -0.72
PHF3-209ENST00000509330 DNAJC30Q96LL9 226 aa10.57□□□□□ -0.72
PHF3-209ENST00000509330 A0A096LPF7 62 aa10.57□□□□□ -0.72
PHF3-209ENST00000509330 LINC01549A6NIU2 74 aa10.57□□□□□ -0.72
PHF3-209ENST00000509330 A8MZ25 164 aa10.56□□□□□ -0.72
PHF3-209ENST00000509330 ZNF22P17026 224 aaPredicted RBP10.56□□□□□ -0.72
PHF3-209ENST00000509330 HERVK_113P61574 105 aa10.56□□□□□ -0.72
PHF3-209ENST00000509330 NHP2Q9NX24 153 aaKnown RBP10.56□□□□□ -0.72
PHF3-209ENST00000509330 X6R8D5 127 aa10.56□□□□□ -0.72
PHF3-209ENST00000509330 NOTCH1P46531 2555 aa10.56□□□□□ -0.72
PHF3-209ENST00000509330 TRAV8-3A0A0A6YYJ7 113 aa10.56□□□□□ -0.72
PHF3-209ENST00000509330 IGKV3OR2-268A0A0C4DH90 116 aa10.55□□□□□ -0.72
PHF3-209ENST00000509330 ANK2Q01484 3957 aa10.54□□□□□ -0.72
PHF3-209ENST00000509330 UBE2D3P61077 147 aa10.54□□□□□ -0.72
PHF3-209ENST00000509330 UBE2D2P62837 147 aa10.54□□□□□ -0.72
PHF3-209ENST00000509330 PAPPA-AS1Q5QFB9 102 aa10.54□□□□□ -0.72
PHF3-209ENST00000509330 H3BUT2 72 aa10.54□□□□□ -0.72
PHF3-209ENST00000509330 SEC11AP67812 179 aa10.54□□□□□ -0.72
PHF3-209ENST00000509330 FAM222AQ5U5X8 452 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms