RNA–Protein interactions for RNA: ENST00000509013.2

SSBP2-211, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-211ENST00000509013 LINC01546A6NGU7 62 aa4.35□□□□□ -1.71
SSBP2-211ENST00000509013 PRSS47A8MTI9 375 aa4.35□□□□□ -1.71
SSBP2-211ENST00000509013 F5H697 171 aa4.35□□□□□ -1.71
SSBP2-211ENST00000509013 ATP5LO75964 103 aa4.35□□□□□ -1.71
SSBP2-211ENST00000509013 NUDT3O95989 172 aa4.35□□□□□ -1.71
SSBP2-211ENST00000509013 PPP1R17O96001 155 aa4.35□□□□□ -1.71
SSBP2-211ENST00000509013 P0DMU3 169 aa4.35□□□□□ -1.71
SSBP2-211ENST00000509013 FAM231AP0DMU4 169 aa4.35□□□□□ -1.71
SSBP2-211ENST00000509013 FAM231CP0DMU5 169 aa4.35□□□□□ -1.71
SSBP2-211ENST00000509013 CDKN1BP46527 198 aa4.35□□□□□ -1.71
SSBP2-211ENST00000509013 COL5A1-AS1Q5SY13 56 aa4.35□□□□□ -1.71
SSBP2-211ENST00000509013 SLC25A34Q6PIV7 304 aa4.35□□□□□ -1.71
SSBP2-211ENST00000509013 Q8NAQ8 132 aa4.35□□□□□ -1.71
SSBP2-211ENST00000509013 TMEM208Q9BTX3 173 aa4.35□□□□□ -1.71
SSBP2-211ENST00000509013 SMIM2Q9BVW6 85 aa4.35□□□□□ -1.71
SSBP2-211ENST00000509013 MRPS16Q9Y3D3 137 aaKnown RBP4.35□□□□□ -1.71
SSBP2-211ENST00000509013 IGLV2-18A0A075B6J9 118 aa4.34□□□□□ -1.71
SSBP2-211ENST00000509013 TRGV11A0A075B6L2 103 aa4.34□□□□□ -1.71
SSBP2-211ENST00000509013 A0A087WWL8 130 aa4.34□□□□□ -1.71
SSBP2-211ENST00000509013 DEFB131BA0A096LNP1 70 aa4.34□□□□□ -1.71
SSBP2-211ENST00000509013 TRAV2A0A0B4J234 112 aa4.34□□□□□ -1.71
SSBP2-211ENST00000509013 IGHV3-16A0A0C4DH30 117 aa4.34□□□□□ -1.71
SSBP2-211ENST00000509013 IGHV4-28A0A0C4DH34 117 aa4.34□□□□□ -1.71
SSBP2-211ENST00000509013 NXPH4O95158 308 aa4.34□□□□□ -1.71
SSBP2-211ENST00000509013 RBMY1A1P0DJD3 496 aaKnown RBP4.34□□□□□ -1.71
SSBP2-211ENST00000509013 RBMY1CP0DJD4 496 aa4.34□□□□□ -1.71
SSBP2-211ENST00000509013 HINT1P49773 126 aaPredicted RBP4.34□□□□□ -1.71
SSBP2-211ENST00000509013 SUMO2P61956 95 aaKnown RBP4.34□□□□□ -1.71
SSBP2-211ENST00000509013 RBMY1FQ15415 496 aaKnown RBP4.34□□□□□ -1.71
SSBP2-211ENST00000509013 MAPKAPK5-AS1Q8N8E1 139 aa4.34□□□□□ -1.71
SSBP2-211ENST00000509013 RASL10AQ92737 203 aa4.34□□□□□ -1.71
SSBP2-211ENST00000509013 RPL39LQ96EH5 51 aaKnown RBP4.34□□□□□ -1.71
SSBP2-211ENST00000509013 C20orf78Q9BR46 151 aa4.34□□□□□ -1.71
SSBP2-211ENST00000509013 JPT2Q9H910 190 aa4.34□□□□□ -1.71
SSBP2-211ENST00000509013 CBY3A6NI87 242 aa4.33□□□□□ -1.72
SSBP2-211ENST00000509013 H3BMM0 161 aa4.33□□□□□ -1.72
SSBP2-211ENST00000509013 CDK2AP2O75956 126 aa4.33□□□□□ -1.72
SSBP2-211ENST00000509013 COX8AP10176 69 aa4.33□□□□□ -1.72
SSBP2-211ENST00000509013 MIFP14174 115 aa4.33□□□□□ -1.72
SSBP2-211ENST00000509013 HTN1P15515 57 aa4.33□□□□□ -1.72
SSBP2-211ENST00000509013 EMP1P54849 157 aa4.33□□□□□ -1.72
SSBP2-211ENST00000509013 ZNF56Q15929 161 aa4.33□□□□□ -1.72
SSBP2-211ENST00000509013 ORMDL2Q53FV1 153 aa4.33□□□□□ -1.72
SSBP2-211ENST00000509013 ANKRD39Q53RE8 183 aa4.33□□□□□ -1.72
SSBP2-211ENST00000509013 FAM74A4Q5TZK3 123 aa4.33□□□□□ -1.72
SSBP2-211ENST00000509013 MORN3Q6PF18 240 aaPredicted RBP4.33□□□□□ -1.72
SSBP2-211ENST00000509013 AMTNQ6UX39 209 aa4.33□□□□□ -1.72
SSBP2-211ENST00000509013 STPG4Q8N801 248 aa4.33□□□□□ -1.72
SSBP2-211ENST00000509013 C9orf85Q96MD7 179 aa4.33□□□□□ -1.72
SSBP2-211ENST00000509013 SCGB3A1Q96QR1 104 aa4.33□□□□□ -1.72
SSBP2-211ENST00000509013 C1QTNF4Q9BXJ3 329 aa4.33□□□□□ -1.72
SSBP2-211ENST00000509013 MDFICQ9P1T7 246 aa4.33□□□□□ -1.72
SSBP2-211ENST00000509013 DKK2Q9UBU2 259 aa4.33□□□□□ -1.72
SSBP2-211ENST00000509013 MUC4Q99102 2169 aa4.33□□□□□ -1.72
SSBP2-211ENST00000509013 AGRNO00468 2067 aa4.33□□□□□ -1.72
SSBP2-211ENST00000509013 HERC1Q15751 4861 aa4.32□□□□□ -1.72
SSBP2-211ENST00000509013 C16orf90A8MZG2 172 aa4.32□□□□□ -1.72
SSBP2-211ENST00000509013 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.32□□□□□ -1.72
SSBP2-211ENST00000509013 DPM2O94777 84 aa4.32□□□□□ -1.72
SSBP2-211ENST00000509013 IGKCP01834 107 aa4.32□□□□□ -1.72
SSBP2-211ENST00000509013 HLA-DRB4P13762 266 aa4.32□□□□□ -1.72
SSBP2-211ENST00000509013 ZNF25P17030 456 aaPredicted RBP4.32□□□□□ -1.72
SSBP2-211ENST00000509013 G0S2P27469 103 aa4.32□□□□□ -1.72
SSBP2-211ENST00000509013 C12orf74Q32Q52 190 aa4.32□□□□□ -1.72
SSBP2-211ENST00000509013 SUMO4Q6EEV6 95 aa4.32□□□□□ -1.72
SSBP2-211ENST00000509013 Q6ZR54 194 aa4.32□□□□□ -1.72
SSBP2-211ENST00000509013 UBE2DNLQ8IWF7 75 aa4.32□□□□□ -1.72
SSBP2-211ENST00000509013 XCL2Q9UBD3 114 aa4.32□□□□□ -1.72
SSBP2-211ENST00000509013 TP73-AS1Q9UF72 201 aa4.32□□□□□ -1.72
SSBP2-211ENST00000509013 KIF25-AS1Q9Y6Z4 181 aa4.32□□□□□ -1.72
SSBP2-211ENST00000509013 HLA-DRB4X5D2U9 266 aa4.32□□□□□ -1.72
SSBP2-211ENST00000509013 K7EMI3 77 aa4.31□□□□□ -1.72
SSBP2-211ENST00000509013 VCYO14598 125 aa4.31□□□□□ -1.72
SSBP2-211ENST00000509013 GIG44P09565 113 aaPredicted RBP4.31□□□□□ -1.72
SSBP2-211ENST00000509013 NMUP48645 174 aa4.31□□□□□ -1.72
SSBP2-211ENST00000509013 LINC00315P59091 139 aa4.31□□□□□ -1.72
SSBP2-211ENST00000509013 ZNF415Q09FC8 603 aa4.31□□□□□ -1.72
SSBP2-211ENST00000509013 ODF1Q14990 250 aa4.31□□□□□ -1.72
SSBP2-211ENST00000509013 ZNF876PQ49A33 203 aa4.31□□□□□ -1.72
SSBP2-211ENST00000509013 C1orf134Q5TEV5 83 aa4.31□□□□□ -1.72
SSBP2-211ENST00000509013 NEGR1Q7Z3B1 354 aa4.31□□□□□ -1.72
SSBP2-211ENST00000509013 Q8N1X5 172 aa4.31□□□□□ -1.72
SSBP2-211ENST00000509013 LINC00469Q8N7U9 141 aa4.31□□□□□ -1.72
SSBP2-211ENST00000509013 TOMM6Q96B49 74 aa4.31□□□□□ -1.72
SSBP2-211ENST00000509013 LINC01587Q99440 93 aa4.31□□□□□ -1.72
SSBP2-211ENST00000509013 KIR2DL4Q99706 377 aa4.31□□□□□ -1.72
SSBP2-211ENST00000509013 CELA1Q9UNI1 258 aa4.31□□□□□ -1.72
SSBP2-211ENST00000509013 X6R8D5 127 aa4.31□□□□□ -1.72
SSBP2-211ENST00000509013 A0A087WX48 190 aa4.3□□□□□ -1.72
SSBP2-211ENST00000509013 A8MTW9 85 aa4.3□□□□□ -1.72
SSBP2-211ENST00000509013 H7C1H1 209 aa4.3□□□□□ -1.72
SSBP2-211ENST00000509013 INSP01308 110 aa4.3□□□□□ -1.72
SSBP2-211ENST00000509013 RPL32P62910 135 aaKnown RBP4.3□□□□□ -1.72
SSBP2-211ENST00000509013 MPV17L2Q567V2 206 aa4.3□□□□□ -1.72
SSBP2-211ENST00000509013 TMEM97Q5BJF2 176 aa4.3□□□□□ -1.72
SSBP2-211ENST00000509013 C2orf66Q6UXQ4 117 aa4.3□□□□□ -1.72
SSBP2-211ENST00000509013 TRPT1Q86TN4 253 aaKnown RBP4.3□□□□□ -1.72
SSBP2-211ENST00000509013 DEFB104AQ8WTQ1 72 aa4.3□□□□□ -1.72
SSBP2-211ENST00000509013 MRPL35Q9NZE8 188 aaKnown RBP4.3□□□□□ -1.72
SSBP2-211ENST00000509013 CYSLTR1Q9Y271 337 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms