RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 PGLYRP4Q96LB8 373 aa9.69□□□□□ -0.86
UBE2D3-228ENST00000508974 TMEM243Q9BU79 118 aa9.69□□□□□ -0.86
UBE2D3-228ENST00000508974 SRRM2Q9UQ35 2752 aaKnown RBP9.69□□□□□ -0.86
UBE2D3-228ENST00000508974 USP17L23D6RBM5 183 aa9.68□□□□□ -0.86
UBE2D3-228ENST00000508974 WDR73Q6P4I2 378 aa9.68□□□□□ -0.86
UBE2D3-228ENST00000508974 GATD1Q8NB37 220 aa9.68□□□□□ -0.86
UBE2D3-228ENST00000508974 SMIM7Q9BQ49 75 aa9.68□□□□□ -0.86
UBE2D3-228ENST00000508974 CNFNQ9BYD5 112 aa9.68□□□□□ -0.86
UBE2D3-228ENST00000508974 VPS13BQ7Z7G8 4022 aa9.67□□□□□ -0.86
UBE2D3-228ENST00000508974 UBE2L6O14933 153 aa9.67□□□□□ -0.86
UBE2D3-228ENST00000508974 AMTP48728 403 aa9.67□□□□□ -0.86
UBE2D3-228ENST00000508974 REG3AQ06141 175 aa9.67□□□□□ -0.86
UBE2D3-228ENST00000508974 SMIM15Q7Z3B0 74 aa9.67□□□□□ -0.86
UBE2D3-228ENST00000508974 RPL39LQ96EH5 51 aaKnown RBP9.67□□□□□ -0.86
UBE2D3-228ENST00000508974 FAM210AQ96ND0 272 aa9.67□□□□□ -0.86
UBE2D3-228ENST00000508974 PRR34Q9NV39 138 aa9.67□□□□□ -0.86
UBE2D3-228ENST00000508974 IGLV4-60A0A075B6I1 120 aa9.66□□□□□ -0.86
UBE2D3-228ENST00000508974 A8MWL6 223 aa9.66□□□□□ -0.86
UBE2D3-228ENST00000508974 COTL1Q14019 142 aa9.66□□□□□ -0.86
UBE2D3-228ENST00000508974 C14orf177Q52M58 125 aa9.66□□□□□ -0.86
UBE2D3-228ENST00000508974 Q6ZSA8 131 aa9.66□□□□□ -0.86
UBE2D3-228ENST00000508974 FAM231DQ6ZW35 169 aa9.66□□□□□ -0.86
UBE2D3-228ENST00000508974 C20orf203Q8NBC4 194 aa9.66□□□□□ -0.86
UBE2D3-228ENST00000508974 GFRA4Q9GZZ7 299 aa9.66□□□□□ -0.86
UBE2D3-228ENST00000508974 ZNF727A8MUV8 499 aa9.65□□□□□ -0.86
UBE2D3-228ENST00000508974 SCXQ7RTU7 201 aa9.65□□□□□ -0.86
UBE2D3-228ENST00000508974 LINC01551Q86U37 167 aa9.65□□□□□ -0.86
UBE2D3-228ENST00000508974 PRSS1P07477 247 aa9.64□□□□□ -0.87
UBE2D3-228ENST00000508974 SRP19P09132 144 aaKnown RBP9.64□□□□□ -0.87
UBE2D3-228ENST00000508974 BORCS7Q96B45 105 aa9.64□□□□□ -0.87
UBE2D3-228ENST00000508974 IGKV3OR2-268A0A0C4DH90 116 aa9.63□□□□□ -0.87
UBE2D3-228ENST00000508974 KRTAP26-1Q6PEX3 210 aa9.63□□□□□ -0.87
UBE2D3-228ENST00000508974 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.61□□□□□ -0.87
UBE2D3-228ENST00000508974 A0A1B0GUV1 79 aa9.61□□□□□ -0.87
UBE2D3-228ENST00000508974 IGKV2-29A2NJV5 120 aaPredicted RBP9.61□□□□□ -0.87
UBE2D3-228ENST00000508974 HIGD1CA8MV81 97 aa9.61□□□□□ -0.87
UBE2D3-228ENST00000508974 GAS8-AS1O95177 125 aa9.61□□□□□ -0.87
UBE2D3-228ENST00000508974 CT83Q5H943 113 aa9.61□□□□□ -0.87
UBE2D3-228ENST00000508974 TSKUQ8WUA8 353 aa9.61□□□□□ -0.87
UBE2D3-228ENST00000508974 FLG2Q5D862 2391 aaPredicted RBP9.6□□□□□ -0.87
UBE2D3-228ENST00000508974 SDHAF1A6NFY7 115 aa9.6□□□□□ -0.87
UBE2D3-228ENST00000508974 APCSP02743 223 aa9.6□□□□□ -0.87
UBE2D3-228ENST00000508974 AMMECR1LQ6DCA0 310 aa9.6□□□□□ -0.87
UBE2D3-228ENST00000508974 RNASEKQ6P5S7 137 aaKnown RBP9.6□□□□□ -0.87
UBE2D3-228ENST00000508974 CHAC1Q9BUX1 264 aa9.6□□□□□ -0.87
UBE2D3-228ENST00000508974 OSTCQ9NRP0 149 aa9.6□□□□□ -0.87
UBE2D3-228ENST00000508974 A0A1B0GUT8 65 aa9.59□□□□□ -0.87
UBE2D3-228ENST00000508974 C9JQL5 133 aa9.59□□□□□ -0.87
UBE2D3-228ENST00000508974 PLA2G1BP04054 148 aaKnown RBP9.59□□□□□ -0.87
UBE2D3-228ENST00000508974 ADIRFQ15847 76 aa9.59□□□□□ -0.87
UBE2D3-228ENST00000508974 TEX261Q6UWH6 196 aa9.59□□□□□ -0.87
UBE2D3-228ENST00000508974 CIRBP-AS1Q8TBR5 109 aa9.59□□□□□ -0.87
UBE2D3-228ENST00000508974 MYCBP2O75592 4640 aa9.59□□□□□ -0.87
UBE2D3-228ENST00000508974 TRAV8-4A0A0B4J246 113 aa9.58□□□□□ -0.88
UBE2D3-228ENST00000508974 hDV102S1A0JD36 115 aa9.58□□□□□ -0.88
UBE2D3-228ENST00000508974 PMCHP20382 165 aa9.58□□□□□ -0.88
UBE2D3-228ENST00000508974 SRSF3P84103 164 aaKnown RBP9.58□□□□□ -0.88
UBE2D3-228ENST00000508974 TMEM241Q24JQ0 296 aa9.58□□□□□ -0.88
UBE2D3-228ENST00000508974 ISOC2Q96AB3 205 aa9.58□□□□□ -0.88
UBE2D3-228ENST00000508974 V9GYV3 84 aa9.58□□□□□ -0.88
UBE2D3-228ENST00000508974 GAGE12HA6NDE8 117 aa9.57□□□□□ -0.88
UBE2D3-228ENST00000508974 SMKR1H3BMG3 65 aa9.57□□□□□ -0.88
UBE2D3-228ENST00000508974 NDUFS6O75380 124 aaKnown RBP9.57□□□□□ -0.88
UBE2D3-228ENST00000508974 NCR2O95944 276 aa9.57□□□□□ -0.88
UBE2D3-228ENST00000508974 RPS10P46783 165 aaKnown RBP9.57□□□□□ -0.88
UBE2D3-228ENST00000508974 RPL23P62829 140 aaKnown RBP9.57□□□□□ -0.88
UBE2D3-228ENST00000508974 AMN1Q8IY45 258 aa9.57□□□□□ -0.88
UBE2D3-228ENST00000508974 TMEM191AQ9H0A3 160 aa9.57□□□□□ -0.88
UBE2D3-228ENST00000508974 ST20Q9HBF5 79 aa9.57□□□□□ -0.88
UBE2D3-228ENST00000508974 TMEM242Q9NWH2 141 aa9.57□□□□□ -0.88
UBE2D3-228ENST00000508974 I3L3M4 83 aa9.56□□□□□ -0.88
UBE2D3-228ENST00000508974 FGF6P10767 208 aa9.56□□□□□ -0.88
UBE2D3-228ENST00000508974 DGAT2L7PQ6IED9 249 aa9.56□□□□□ -0.88
UBE2D3-228ENST00000508974 NUP35Q8NFH5 326 aa9.56□□□□□ -0.88
UBE2D3-228ENST00000508974 RNF185Q96GF1 192 aa9.56□□□□□ -0.88
UBE2D3-228ENST00000508974 DMBT1Q9UGM3 2413 aaPredicted RBP9.56□□□□□ -0.88
UBE2D3-228ENST00000508974 TRBV6-5A0A0K0K1A5 114 aa9.55□□□□□ -0.88
UBE2D3-228ENST00000508974 GHRHP01286 108 aa9.55□□□□□ -0.88
UBE2D3-228ENST00000508974 RAB4AP20338 218 aa9.55□□□□□ -0.88
UBE2D3-228ENST00000508974 FAM74A3Q4VXF1 159 aa9.55□□□□□ -0.88
UBE2D3-228ENST00000508974 C9orf163Q8N9P6 203 aa9.55□□□□□ -0.88
UBE2D3-228ENST00000508974 CLRN3Q8NCR9 226 aa9.55□□□□□ -0.88
UBE2D3-228ENST00000508974 HERC1Q15751 4861 aa9.54□□□□□ -0.88
UBE2D3-228ENST00000508974 FAM231BA6NCW3 169 aa9.54□□□□□ -0.88
UBE2D3-228ENST00000508974 TSHBP01222 138 aa9.54□□□□□ -0.88
UBE2D3-228ENST00000508974 RIGQ13278 110 aa9.54□□□□□ -0.88
UBE2D3-228ENST00000508974 NAT8Q9UHE5 227 aa9.54□□□□□ -0.88
UBE2D3-228ENST00000508974 NAT8BQ9UHF3 227 aa9.54□□□□□ -0.88
UBE2D3-228ENST00000508974 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.54□□□□□ -0.88
UBE2D3-228ENST00000508974 PANO1I0J062 215 aa9.53□□□□□ -0.88
UBE2D3-228ENST00000508974 PEA15Q15121 130 aa9.53□□□□□ -0.88
UBE2D3-228ENST00000508974 HIGD2BQ4VC39 106 aa9.53□□□□□ -0.88
UBE2D3-228ENST00000508974 CHCHD10Q8WYQ3 142 aaPredicted RBP9.53□□□□□ -0.88
UBE2D3-228ENST00000508974 MRAP2Q96G30 205 aa9.53□□□□□ -0.88
UBE2D3-228ENST00000508974 BTF3L4Q96K17 158 aa9.53□□□□□ -0.88
UBE2D3-228ENST00000508974 AP5S1Q9NUS5 200 aa9.53□□□□□ -0.88
UBE2D3-228ENST00000508974 H7C423 109 aa9.52□□□□□ -0.89
UBE2D3-228ENST00000508974 CAMPP49913 170 aa9.52□□□□□ -0.89
UBE2D3-228ENST00000508974 C15orf56Q8N910 161 aa9.52□□□□□ -0.89
UBE2D3-228ENST00000508974 TMEM101Q96IK0 257 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms