RNA–Protein interactions for RNA: ENST00000508854.1

SH3D21-206, Transcript of SH3 domain containing 21, humanhuman

TSL 5

Gene SH3D21, Length 1,134 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-206ENST00000508854 AP1S3Q96PC3 154 aa6.37□□□□□ -1.39
SH3D21-206ENST00000508854 SSBP4Q9BWG4 385 aaPredicted RBP6.37□□□□□ -1.39
SH3D21-206ENST00000508854 IGLV10-54A0A075B6I4 117 aa6.36□□□□□ -1.39
SH3D21-206ENST00000508854 BAGE2Q86Y30 109 aa6.36□□□□□ -1.39
SH3D21-206ENST00000508854 SPACA4Q8TDM5 124 aa6.36□□□□□ -1.39
SH3D21-206ENST00000508854 C11orf52Q96A22 123 aa6.36□□□□□ -1.39
SH3D21-206ENST00000508854 PLAC8Q9NZF1 115 aa6.36□□□□□ -1.39
SH3D21-206ENST00000508854 RNF213Q63HN8 5207 aa6.35□□□□□ -1.39
SH3D21-206ENST00000508854 XKRY2A2RUG3 117 aa6.35□□□□□ -1.39
SH3D21-206ENST00000508854 BLOC1S1P78537 153 aa6.35□□□□□ -1.39
SH3D21-206ENST00000508854 LINC01600Q96MT4 127 aa6.35□□□□□ -1.39
SH3D21-206ENST00000508854 TMEM243Q9BU79 118 aa6.35□□□□□ -1.39
SH3D21-206ENST00000508854 MLST8Q9BVC4 326 aa6.35□□□□□ -1.39
SH3D21-206ENST00000508854 PKIGQ9Y2B9 76 aa6.35□□□□□ -1.39
SH3D21-206ENST00000508854 TNXBP22105 4242 aa6.35□□□□□ -1.39
SH3D21-206ENST00000508854 PHOX2AO14813 284 aa6.34□□□□□ -1.39
SH3D21-206ENST00000508854 UBE2L6O14933 153 aa6.34□□□□□ -1.39
SH3D21-206ENST00000508854 RPS20P60866 119 aaKnown RBP6.34□□□□□ -1.39
SH3D21-206ENST00000508854 MEF2BQ02080 365 aaPredicted RBP6.34□□□□□ -1.39
SH3D21-206ENST00000508854 M0QY20 66 aa6.33□□□□□ -1.4
SH3D21-206ENST00000508854 CHTF8P0CG12 524 aa6.33□□□□□ -1.4
SH3D21-206ENST00000508854 RPS10P46783 165 aaKnown RBP6.33□□□□□ -1.4
SH3D21-206ENST00000508854 CCL20P78556 96 aa6.33□□□□□ -1.4
SH3D21-206ENST00000508854 LRP2P98164 4655 aa6.33□□□□□ -1.4
SH3D21-206ENST00000508854 REG3GQ6UW15 175 aa6.33□□□□□ -1.4
SH3D21-206ENST00000508854 C20orf203Q8NBC4 194 aa6.33□□□□□ -1.4
SH3D21-206ENST00000508854 GTSF1Q8WW33 167 aa6.33□□□□□ -1.4
SH3D21-206ENST00000508854 PGLYRP4Q96LB8 373 aa6.33□□□□□ -1.4
SH3D21-206ENST00000508854 GNG13Q9P2W3 67 aa6.33□□□□□ -1.4
SH3D21-206ENST00000508854 KIF25-AS1Q9Y6Z4 181 aa6.33□□□□□ -1.4
SH3D21-206ENST00000508854 MUC21A0A0G2JKD1 596 aa6.32□□□□□ -1.4
SH3D21-206ENST00000508854 MUC21A0A140T8X8 626 aa6.32□□□□□ -1.4
SH3D21-206ENST00000508854 F2Z2F3 143 aa6.32□□□□□ -1.4
SH3D21-206ENST00000508854 MGPP08493 103 aa6.32□□□□□ -1.4
SH3D21-206ENST00000508854 BCL2P10415 239 aa6.32□□□□□ -1.4
SH3D21-206ENST00000508854 RPL35P42766 123 aaKnown RBP6.32□□□□□ -1.4
SH3D21-206ENST00000508854 SSTP61278 116 aa6.32□□□□□ -1.4
SH3D21-206ENST00000508854 CACNG7P62955 275 aa6.32□□□□□ -1.4
SH3D21-206ENST00000508854 LINC00474Q9P2X8 69 aa6.32□□□□□ -1.4
SH3D21-206ENST00000508854 A0A0J9YXV3 536 aa6.31□□□□□ -1.4
SH3D21-206ENST00000508854 SCO2A0A1W2PP80 73 aa6.31□□□□□ -1.4
SH3D21-206ENST00000508854 TMEM250H0YL14 139 aa6.31□□□□□ -1.4
SH3D21-206ENST00000508854 SLPIP03973 132 aa6.31□□□□□ -1.4
SH3D21-206ENST00000508854 GNG4P50150 75 aa6.31□□□□□ -1.4
SH3D21-206ENST00000508854 COX6A2Q02221 97 aa6.31□□□□□ -1.4
SH3D21-206ENST00000508854 RASL11AQ6T310 242 aa6.31□□□□□ -1.4
SH3D21-206ENST00000508854 SPINK6Q6UWN8 80 aa6.31□□□□□ -1.4
SH3D21-206ENST00000508854 C9orf62Q8N4C0 152 aa6.31□□□□□ -1.4
SH3D21-206ENST00000508854 NIT2Q9NQR4 276 aa6.31□□□□□ -1.4
SH3D21-206ENST00000508854 IGLV4-60A0A075B6I1 120 aa6.3□□□□□ -1.4
SH3D21-206ENST00000508854 TRGC1P0CF51 173 aa6.3□□□□□ -1.4
SH3D21-206ENST00000508854 NKX2-5P52952 324 aaPredicted RBP6.3□□□□□ -1.4
SH3D21-206ENST00000508854 PRR3P79522 188 aaKnown RBP6.3□□□□□ -1.4
SH3D21-206ENST00000508854 COTL1Q14019 142 aa6.3□□□□□ -1.4
SH3D21-206ENST00000508854 SUMO4Q6EEV6 95 aa6.3□□□□□ -1.4
SH3D21-206ENST00000508854 FER1L6-AS1Q8NA97 138 aa6.3□□□□□ -1.4
SH3D21-206ENST00000508854 LYPD6BQ8NI32 183 aa6.3□□□□□ -1.4
SH3D21-206ENST00000508854 MED9Q9NWA0 146 aa6.3□□□□□ -1.4
SH3D21-206ENST00000508854 GAGE12HA6NDE8 117 aa6.29□□□□□ -1.4
SH3D21-206ENST00000508854 AMTP48728 403 aa6.29□□□□□ -1.4
SH3D21-206ENST00000508854 STPG4Q8N801 248 aa6.29□□□□□ -1.4
SH3D21-206ENST00000508854 TPPP3Q9BW30 176 aa6.29□□□□□ -1.4
SH3D21-206ENST00000508854 IGKV2-24A0A0C4DH68 120 aa6.28□□□□□ -1.4
SH3D21-206ENST00000508854 A0A1B0GV50 99 aa6.28□□□□□ -1.4
SH3D21-206ENST00000508854 KRTAP10-8P60410 259 aa6.28□□□□□ -1.4
SH3D21-206ENST00000508854 CENPWQ5EE01 88 aa6.28□□□□□ -1.4
SH3D21-206ENST00000508854 C15orf56Q8N910 161 aa6.28□□□□□ -1.4
SH3D21-206ENST00000508854 PRSS3P2Q8NHM4 247 aa6.28□□□□□ -1.4
SH3D21-206ENST00000508854 GFRA4Q9GZZ7 299 aa6.28□□□□□ -1.4
SH3D21-206ENST00000508854 SMDT1Q9H4I9 107 aa6.28□□□□□ -1.4
SH3D21-206ENST00000508854 GVQW2A0A096LPI5 108 aaPredicted RBP6.27□□□□□ -1.41
SH3D21-206ENST00000508854 C19orf71A6NCJ1 209 aa6.27□□□□□ -1.41
SH3D21-206ENST00000508854 H7C423 109 aa6.27□□□□□ -1.41
SH3D21-206ENST00000508854 IGLC6P0CF74 106 aa6.27□□□□□ -1.41
SH3D21-206ENST00000508854 AMMECR1LQ6DCA0 310 aa6.27□□□□□ -1.41
SH3D21-206ENST00000508854 OR2D3Q8NGH3 330 aa6.27□□□□□ -1.41
SH3D21-206ENST00000508854 NCR2O95944 276 aa6.26□□□□□ -1.41
SH3D21-206ENST00000508854 HIGD2BQ4VC39 106 aa6.26□□□□□ -1.41
SH3D21-206ENST00000508854 Q6ZRP5 223 aa6.26□□□□□ -1.41
SH3D21-206ENST00000508854 CHCHD10Q8WYQ3 142 aaPredicted RBP6.26□□□□□ -1.41
SH3D21-206ENST00000508854 IGKV3OR2-268A0A0C4DH90 116 aa6.25□□□□□ -1.41
SH3D21-206ENST00000508854 SCGB1D1O95968 90 aa6.25□□□□□ -1.41
SH3D21-206ENST00000508854 NTF3P20783 257 aa6.25□□□□□ -1.41
SH3D21-206ENST00000508854 FAM74A3Q4VXF1 159 aa6.25□□□□□ -1.41
SH3D21-206ENST00000508854 CT83Q5H943 113 aa6.25□□□□□ -1.41
SH3D21-206ENST00000508854 TEX261Q6UWH6 196 aa6.25□□□□□ -1.41
SH3D21-206ENST00000508854 FAM231DQ6ZW35 169 aa6.25□□□□□ -1.41
SH3D21-206ENST00000508854 A0A096LNI7 61 aa6.24□□□□□ -1.41
SH3D21-206ENST00000508854 IGHV1-58A0A0C4DH39 117 aa6.24□□□□□ -1.41
SH3D21-206ENST00000508854 FAM231BA6NCW3 169 aa6.24□□□□□ -1.41
SH3D21-206ENST00000508854 ZNF25P17030 456 aaPredicted RBP6.24□□□□□ -1.41
SH3D21-206ENST00000508854 SRSF9Q13242 221 aaKnown RBP eCLIP6.24□□□□□ -1.41
SH3D21-206ENST00000508854 RNASEKQ6P5S7 137 aaKnown RBP6.24□□□□□ -1.41
SH3D21-206ENST00000508854 ALKAL2Q6UX46 152 aa6.24□□□□□ -1.41
SH3D21-206ENST00000508854 SMIM15Q7Z3B0 74 aa6.24□□□□□ -1.41
SH3D21-206ENST00000508854 BTF3L4Q96K17 158 aa6.24□□□□□ -1.41
SH3D21-206ENST00000508854 CNFNQ9BYD5 112 aa6.24□□□□□ -1.41
SH3D21-206ENST00000508854 A8MWL6 223 aa6.23□□□□□ -1.41
SH3D21-206ENST00000508854 APCSP02743 223 aa6.23□□□□□ -1.41
SH3D21-206ENST00000508854 FOXA3P55318 350 aaPredicted RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms