RNA–Protein interactions for RNA: ENST00000508006.1

SNCB-204, Transcript of synuclein beta, humanhuman

TSL 2

Gene SNCB, Length 969 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-204ENST00000508006 DNAH17Q9UFH2 4485 aa15.24■□□□□ 0.03
SNCB-204ENST00000508006 TRBV25-1A0A075B6N4 114 aa15.24■□□□□ 0.03
SNCB-204ENST00000508006 TNFRSF6BO95407 300 aa15.24■□□□□ 0.03
SNCB-204ENST00000508006 PKIAP61925 76 aa15.24■□□□□ 0.03
SNCB-204ENST00000508006 IQCJQ1A5X6 159 aa15.24■□□□□ 0.03
SNCB-204ENST00000508006 TTC32Q5I0X7 151 aa15.24■□□□□ 0.03
SNCB-204ENST00000508006 WFDC10BQ8IUB3 73 aa15.24■□□□□ 0.03
SNCB-204ENST00000508006 YPEL4Q96NS1 127 aa15.24■□□□□ 0.03
SNCB-204ENST00000508006 IGLV2-18A0A075B6J9 118 aa15.23■□□□□ 0.03
SNCB-204ENST00000508006 TRAV9-2A0A087WT02 112 aa15.23■□□□□ 0.03
SNCB-204ENST00000508006 TGIF2-C20orf24A0A0A6YYL0 155 aa15.23■□□□□ 0.03
SNCB-204ENST00000508006 IGHV1-24A0A0C4DH33 117 aa15.23■□□□□ 0.03
SNCB-204ENST00000508006 VCYO14598 125 aa15.23■□□□□ 0.03
SNCB-204ENST00000508006 APCSP02743 223 aa15.23■□□□□ 0.03
SNCB-204ENST00000508006 LINC01556Q5JQF7 62 aa15.23■□□□□ 0.03
SNCB-204ENST00000508006 NTM-AS1Q6ZSK4 140 aa15.23■□□□□ 0.03
SNCB-204ENST00000508006 PRELID3AQ96N28 172 aa15.23■□□□□ 0.03
SNCB-204ENST00000508006 NBDYA0A0U1RRE5 68 aa15.22■□□□□ 0.03
SNCB-204ENST00000508006 PMCHP20382 165 aa15.22■□□□□ 0.03
SNCB-204ENST00000508006 CHCHD7Q9BUK0 85 aa15.22■□□□□ 0.03
SNCB-204ENST00000508006 PRSS47A8MTI9 375 aa15.21■□□□□ 0.03
SNCB-204ENST00000508006 TCAPO15273 167 aa15.21■□□□□ 0.03
SNCB-204ENST00000508006 BTF3P20290 206 aaKnown RBP15.2■□□□□ 0.02
SNCB-204ENST00000508006 Q6ZR54 194 aa15.2■□□□□ 0.02
SNCB-204ENST00000508006 CBLN2Q8IUK8 224 aa15.2■□□□□ 0.02
SNCB-204ENST00000508006 C10orf126Q8N4M7 172 aa15.2■□□□□ 0.02
SNCB-204ENST00000508006 NPYP01303 97 aa15.19■□□□□ 0.02
SNCB-204ENST00000508006 S100A1P23297 94 aa15.19■□□□□ 0.02
SNCB-204ENST00000508006 NIT1Q86X76 327 aa15.19■□□□□ 0.02
SNCB-204ENST00000508006 KIR2DL4Q99706 377 aa15.19■□□□□ 0.02
SNCB-204ENST00000508006 MRPL18Q9H0U6 180 aaKnown RBP15.19■□□□□ 0.02
SNCB-204ENST00000508006 AMTP48728 403 aa15.18■□□□□ 0.02
SNCB-204ENST00000508006 CHCHD5Q9BSY4 110 aa15.18■□□□□ 0.02
SNCB-204ENST00000508006 TMEM243Q9BU79 118 aa15.18■□□□□ 0.02
SNCB-204ENST00000508006 SMIM2Q9BVW6 85 aa15.17■□□□□ 0.02
SNCB-204ENST00000508006 PKD1P98161 4303 aa15.16■□□□□ 0.02
SNCB-204ENST00000508006 A0A087WX48 190 aa15.16■□□□□ 0.02
SNCB-204ENST00000508006 H7C423 109 aa15.16■□□□□ 0.02
SNCB-204ENST00000508006 TSHBP01222 138 aa15.16■□□□□ 0.02
SNCB-204ENST00000508006 MAP1LC3AQ9H492 121 aa15.16■□□□□ 0.02
SNCB-204ENST00000508006 TRAPPC1Q9Y5R8 145 aa15.16■□□□□ 0.02
SNCB-204ENST00000508006 FABP9Q0Z7S8 132 aa15.15■□□□□ 0.02
SNCB-204ENST00000508006 DYNC1H1Q14204 4646 aaKnown RBP15.14■□□□□ 0.01
SNCB-204ENST00000508006 FCER1GP30273 86 aa15.14■□□□□ 0.01
SNCB-204ENST00000508006 C1orf134Q5TEV5 83 aa15.14■□□□□ 0.01
SNCB-204ENST00000508006 TMEM262E9PQX1 116 aa15.13■□□□□ 0.01
SNCB-204ENST00000508006 UBE2L6O14933 153 aa15.13■□□□□ 0.01
SNCB-204ENST00000508006 KIAA1644Q3SXP7 199 aa15.13■□□□□ 0.01
SNCB-204ENST00000508006 ALKBH7Q9BT30 221 aaPredicted RBP15.13■□□□□ 0.01
SNCB-204ENST00000508006 ABCA13Q86UQ4 5058 aa15.13■□□□□ 0.01
SNCB-204ENST00000508006 A0A1B0GUV1 79 aa15.12■□□□□ 0.01
SNCB-204ENST00000508006 K7EMI3 77 aa15.12■□□□□ 0.01
SNCB-204ENST00000508006 ESDP10768 282 aa15.12■□□□□ 0.01
SNCB-204ENST00000508006 LAGE3Q14657 143 aa15.12■□□□□ 0.01
SNCB-204ENST00000508006 DNAH11Q96DT5 4516 aa15.11■□□□□ 0.01
SNCB-204ENST00000508006 IBA57-AS1B1ANH7 110 aa15.11■□□□□ 0.01
SNCB-204ENST00000508006 ATP6V1G1O75348 118 aa15.11■□□□□ 0.01
SNCB-204ENST00000508006 IGHV3-30P01768 117 aa15.11■□□□□ 0.01
SNCB-204ENST00000508006 IGHV3-33P01772 117 aa15.11■□□□□ 0.01
SNCB-204ENST00000508006 IGHV3-30-3P0DP02 117 aa15.11■□□□□ 0.01
SNCB-204ENST00000508006 IGHV3-30-5P0DP03 117 aa15.11■□□□□ 0.01
SNCB-204ENST00000508006 KRTAP4-5Q9BYR2 181 aa15.11■□□□□ 0.01
SNCB-204ENST00000508006 KRTAP1-5Q9BYS1 174 aa15.11■□□□□ 0.01
SNCB-204ENST00000508006 NXT2Q9NPJ8 142 aaKnown RBP15.11■□□□□ 0.01
SNCB-204ENST00000508006 Q8N8P6 123 aa15.1■□□□□ 0.01
SNCB-204ENST00000508006 RAB5AP20339 215 aa15.09■□□□□ 0.01
SNCB-204ENST00000508006 SMAGPQ0VAQ4 97 aa15.09■□□□□ 0.01
SNCB-204ENST00000508006 GAGE6Q13070 117 aa15.09■□□□□ 0.01
SNCB-204ENST00000508006 MPV17L2Q567V2 206 aa15.09■□□□□ 0.01
SNCB-204ENST00000508006 DEFB104AQ8WTQ1 72 aa15.09■□□□□ 0.01
SNCB-204ENST00000508006 TMEM18Q96B42 140 aa15.09■□□□□ 0.01
SNCB-204ENST00000508006 COLCA2A8K830 154 aa15.08■□□□□ 0
SNCB-204ENST00000508006 ZNF25P17030 456 aaPredicted RBP15.08■□□□□ 0
SNCB-204ENST00000508006 NFE4Q86UQ8 179 aa15.08■□□□□ 0
SNCB-204ENST00000508006 C6orf223Q8N319 242 aa15.08■□□□□ 0
SNCB-204ENST00000508006 LOC389332A0A1B0GUA5 103 aa15.07■□□□□ 0
SNCB-204ENST00000508006 RBX1P62877 108 aa15.07■□□□□ 0
SNCB-204ENST00000508006 MRPL52Q86TS9 123 aaKnown RBP15.06■□□□□ 0
SNCB-204ENST00000508006 TRAV8-3A0A0A6YYJ7 113 aa15.05■□□□□ -0
SNCB-204ENST00000508006 C16orf90A8MZG2 172 aa15.05■□□□□ -0
SNCB-204ENST00000508006 ORMDL2Q53FV1 153 aa15.05■□□□□ -0
SNCB-204ENST00000508006 AMMECR1LQ6DCA0 310 aa15.05■□□□□ -0
SNCB-204ENST00000508006 Q8N3U1 123 aa15.05■□□□□ -0
SNCB-204ENST00000508006 C20orf203Q8NBC4 194 aa15.05■□□□□ -0
SNCB-204ENST00000508006 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.04■□□□□ -0
SNCB-204ENST00000508006 IGKV2-29A2NJV5 120 aaPredicted RBP15.04■□□□□ -0
SNCB-204ENST00000508006 SCO1O75880 301 aa15.04■□□□□ -0
SNCB-204ENST00000508006 ANGP03950 147 aaKnown RBP15.04■□□□□ -0
SNCB-204ENST00000508006 FGF6P10767 208 aa15.04■□□□□ -0
SNCB-204ENST00000508006 G0S2P27469 103 aa15.04■□□□□ -0
SNCB-204ENST00000508006 Q0VG73 95 aa15.04■□□□□ -0
SNCB-204ENST00000508006 Q8N976 141 aa15.04■□□□□ -0
SNCB-204ENST00000508006 PRSS3P2Q8NHM4 247 aa15.04■□□□□ -0
SNCB-204ENST00000508006 KLK12Q9UKR0 248 aa15.04■□□□□ -0
SNCB-204ENST00000508006 CSDC2Q9Y534 153 aaKnown RBP15.04■□□□□ -0
SNCB-204ENST00000508006 IFI27P40305 119 aaPredicted RBP15.03■□□□□ -0
SNCB-204ENST00000508006 TIMM21Q9BVV7 248 aa15.03■□□□□ -0
SNCB-204ENST00000508006 LINC01546A6NGU7 62 aa15.02■□□□□ -0
SNCB-204ENST00000508006 TMEM101Q96IK0 257 aa15.02■□□□□ -0
SNCB-204ENST00000508006 PRR34Q9NV39 138 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms