RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 C5orf52A6NGY3 159 aa12.15□□□□□ -0.46
RNF4-209ENST00000507784 K7EMI3 77 aa12.15□□□□□ -0.46
RNF4-209ENST00000507784 BTF3P20290 206 aaKnown RBP12.15□□□□□ -0.46
RNF4-209ENST00000507784 S100A2P29034 98 aa12.15□□□□□ -0.46
RNF4-209ENST00000507784 AMTP48728 403 aa12.15□□□□□ -0.46
RNF4-209ENST00000507784 SH2D6Q7Z4S9 175 aa12.15□□□□□ -0.46
RNF4-209ENST00000507784 IGHV1-24A0A0C4DH33 117 aa12.14□□□□□ -0.47
RNF4-209ENST00000507784 ESDP10768 282 aa12.14□□□□□ -0.47
RNF4-209ENST00000507784 COL7A1Q02388 2944 aa12.14□□□□□ -0.47
RNF4-209ENST00000507784 TMEM97Q5BJF2 176 aa12.13□□□□□ -0.47
RNF4-209ENST00000507784 HIST3H2BBQ8N257 126 aa12.13□□□□□ -0.47
RNF4-209ENST00000507784 GTSF1LQ9H1H1 148 aa12.13□□□□□ -0.47
RNF4-209ENST00000507784 HBDP02042 147 aa12.12□□□□□ -0.47
RNF4-209ENST00000507784 NTM-AS1Q6ZSK4 140 aa12.12□□□□□ -0.47
RNF4-209ENST00000507784 C15orf53Q8NAA6 179 aa12.12□□□□□ -0.47
RNF4-209ENST00000507784 FABP4P15090 132 aa12.11□□□□□ -0.47
RNF4-209ENST00000507784 G0S2P27469 103 aa12.11□□□□□ -0.47
RNF4-209ENST00000507784 CEMP1Q6PRD7 247 aaPredicted RBP12.11□□□□□ -0.47
RNF4-209ENST00000507784 CHCHD7Q9BUK0 85 aa12.11□□□□□ -0.47
RNF4-209ENST00000507784 TRBV25-1A0A075B6N4 114 aa12.1□□□□□ -0.47
RNF4-209ENST00000507784 C2orf66Q6UXQ4 117 aa12.1□□□□□ -0.47
RNF4-209ENST00000507784 TMEM18Q96B42 140 aa12.1□□□□□ -0.47
RNF4-209ENST00000507784 CYSLTR1Q9Y271 337 aa12.1□□□□□ -0.47
RNF4-209ENST00000507784 PRKDCP78527 4128 aaKnown RBP12.09□□□□□ -0.47
RNF4-209ENST00000507784 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.09□□□□□ -0.47
RNF4-209ENST00000507784 TRBV6-8A0A0A6YYG3 113 aa12.09□□□□□ -0.47
RNF4-209ENST00000507784 IGKV2-29A2NJV5 120 aaPredicted RBP12.09□□□□□ -0.47
RNF4-209ENST00000507784 UBE2L6O14933 153 aa12.09□□□□□ -0.47
RNF4-209ENST00000507784 LYPD5Q6UWN5 251 aa12.09□□□□□ -0.47
RNF4-209ENST00000507784 C20orf203Q8NBC4 194 aa12.09□□□□□ -0.47
RNF4-209ENST00000507784 TMEM243Q9BU79 118 aa12.09□□□□□ -0.47
RNF4-209ENST00000507784 KLK5Q9Y337 293 aaPredicted RBP12.09□□□□□ -0.47
RNF4-209ENST00000507784 A0A096LNJ9 63 aa12.08□□□□□ -0.48
RNF4-209ENST00000507784 NUPR2A6NF83 97 aa12.08□□□□□ -0.48
RNF4-209ENST00000507784 RPL39P62891 51 aaKnown RBP12.08□□□□□ -0.48
RNF4-209ENST00000507784 ZFAND6Q6FIF0 208 aa12.08□□□□□ -0.48
RNF4-209ENST00000507784 CHCHD5Q9BSY4 110 aa12.08□□□□□ -0.48
RNF4-209ENST00000507784 LEPROTL1O95214 131 aa12.07□□□□□ -0.48
RNF4-209ENST00000507784 GAGE6Q13070 117 aa12.07□□□□□ -0.48
RNF4-209ENST00000507784 TOMM6Q96B49 74 aa12.07□□□□□ -0.48
RNF4-209ENST00000507784 SCGB3A1Q96QR1 104 aa12.07□□□□□ -0.48
RNF4-209ENST00000507784 ESRGQ1W209 222 aa12.06□□□□□ -0.48
RNF4-209ENST00000507784 HIST1H2BLQ99880 126 aa12.06□□□□□ -0.48
RNF4-209ENST00000507784 TMEM262E9PQX1 116 aa12.05□□□□□ -0.48
RNF4-209ENST00000507784 LELP1Q5T871 98 aa12.05□□□□□ -0.48
RNF4-209ENST00000507784 AMMECR1LQ6DCA0 310 aa12.05□□□□□ -0.48
RNF4-209ENST00000507784 LINC00173Q6ZV60 143 aa12.05□□□□□ -0.48
RNF4-209ENST00000507784 HSPB8Q9UJY1 196 aa12.05□□□□□ -0.48
RNF4-209ENST00000507784 IFITM10A6NMD0 228 aa12.04□□□□□ -0.48
RNF4-209ENST00000507784 WWC2-AS2Q96NR7 200 aa12.04□□□□□ -0.48
RNF4-209ENST00000507784 TRAV8-6A0A0B4J262 113 aa12.03□□□□□ -0.48
RNF4-209ENST00000507784 LINC01549A6NIU2 74 aa12.03□□□□□ -0.48
RNF4-209ENST00000507784 TIRAPP58753 221 aa12.03□□□□□ -0.48
RNF4-209ENST00000507784 SMAGPQ0VAQ4 97 aa12.03□□□□□ -0.48
RNF4-209ENST00000507784 DGAT2L7PQ6IED9 249 aa12.03□□□□□ -0.48
RNF4-209ENST00000507784 APLNQ9ULZ1 77 aa12.03□□□□□ -0.48
RNF4-209ENST00000507784 H7C423 109 aa12.02□□□□□ -0.49
RNF4-209ENST00000507784 ATP5LO75964 103 aa12.02□□□□□ -0.49
RNF4-209ENST00000507784 FGF6P10767 208 aa12.02□□□□□ -0.49
RNF4-209ENST00000507784 OR10D4PQ8NGN7 298 aa12.02□□□□□ -0.49
RNF4-209ENST00000507784 MUC7Q8TAX7 377 aa12.02□□□□□ -0.49
RNF4-209ENST00000507784 IFI27L1Q96BM0 104 aa12.02□□□□□ -0.49
RNF4-209ENST00000507784 PACRGQ96M98 296 aaPredicted RBP12.02□□□□□ -0.49
RNF4-209ENST00000507784 H0Y8G0 127 aa12.01□□□□□ -0.49
RNF4-209ENST00000507784 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.01□□□□□ -0.49
RNF4-209ENST00000507784 CCL18P55774 89 aa12.01□□□□□ -0.49
RNF4-209ENST00000507784 KRTDAPP60985 99 aa12.01□□□□□ -0.49
RNF4-209ENST00000507784 Q6ZN92 141 aa12.01□□□□□ -0.49
RNF4-209ENST00000507784 ERASQ7Z444 233 aa12.01□□□□□ -0.49
RNF4-209ENST00000507784 TMEM101Q96IK0 257 aa12.01□□□□□ -0.49
RNF4-209ENST00000507784 UBE2D4Q9Y2X8 147 aa12.01□□□□□ -0.49
RNF4-209ENST00000507784 FBN3Q75N90 2809 aa12.01□□□□□ -0.49
RNF4-209ENST00000507784 PRSS1P07477 247 aa12□□□□□ -0.49
RNF4-209ENST00000507784 TMEM141Q96I45 108 aa12□□□□□ -0.49
RNF4-209ENST00000507784 OPRPNQ99935 248 aaPredicted RBP12□□□□□ -0.49
RNF4-209ENST00000507784 MAP1LC3CQ9BXW4 147 aa12□□□□□ -0.49
RNF4-209ENST00000507784 IGIPA6NJ69 53 aa11.99□□□□□ -0.49
RNF4-209ENST00000507784 AKR1D1P51857 326 aa11.99□□□□□ -0.49
RNF4-209ENST00000507784 OR5A1Q8NGJ0 315 aa11.99□□□□□ -0.49
RNF4-209ENST00000507784 TIMM17AQ99595 171 aa11.99□□□□□ -0.49
RNF4-209ENST00000507784 SPANXA1Q9NS26 97 aa11.99□□□□□ -0.49
RNF4-209ENST00000507784 STAB2Q8WWQ8 2551 aa11.99□□□□□ -0.49
RNF4-209ENST00000507784 TCTAP57738 103 aa11.98□□□□□ -0.49
RNF4-209ENST00000507784 MRPL52Q86TS9 123 aaKnown RBP11.98□□□□□ -0.49
RNF4-209ENST00000507784 UBE2DNLQ8IWF7 75 aa11.98□□□□□ -0.49
RNF4-209ENST00000507784 TIMM21Q9BVV7 248 aa11.98□□□□□ -0.49
RNF4-209ENST00000507784 PYGO1Q9Y3Y4 419 aa11.98□□□□□ -0.49
RNF4-209ENST00000507784 LINC00588Q9Y4M8 146 aa11.98□□□□□ -0.49
RNF4-209ENST00000507784 A0A087WX48 190 aa11.97□□□□□ -0.49
RNF4-209ENST00000507784 LOC105371267A0A1B0GV96 52 aa11.97□□□□□ -0.49
RNF4-209ENST00000507784 C3orf79P0CE67 100 aa11.97□□□□□ -0.49
RNF4-209ENST00000507784 PKIAP61925 76 aa11.97□□□□□ -0.49
RNF4-209ENST00000507784 RNASE13Q5GAN3 156 aaKnown RBP11.97□□□□□ -0.49
RNF4-209ENST00000507784 WFDC10BQ8IUB3 73 aa11.97□□□□□ -0.49
RNF4-209ENST00000507784 IGLV4-3A0A075B6K6 122 aa11.96□□□□□ -0.49
RNF4-209ENST00000507784 IGHV3-30P01768 117 aa11.96□□□□□ -0.49
RNF4-209ENST00000507784 IGHV3-33P01772 117 aa11.96□□□□□ -0.49
RNF4-209ENST00000507784 IGHV3-30-3P0DP02 117 aa11.96□□□□□ -0.49
RNF4-209ENST00000507784 IGHV3-30-5P0DP03 117 aa11.96□□□□□ -0.49
RNF4-209ENST00000507784 ZNF25P17030 456 aaPredicted RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms