RNA–Protein interactions for RNA: ENST00000507650.1

HOXC4-203, Transcript of homeobox C4, humanhuman

TSL 3

Gene HOXC4, Length 575 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-203ENST00000507650 IGLV10-54A0A075B6I4 117 aa10.38□□□□□ -0.75
HOXC4-203ENST00000507650 TAGLN2P37802 199 aaKnown RBP10.38□□□□□ -0.75
HOXC4-203ENST00000507650 PKIAP61925 76 aa10.38□□□□□ -0.75
HOXC4-203ENST00000507650 REG3AQ06141 175 aa10.38□□□□□ -0.75
HOXC4-203ENST00000507650 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.38□□□□□ -0.75
HOXC4-203ENST00000507650 RPL39LQ96EH5 51 aaKnown RBP10.38□□□□□ -0.75
HOXC4-203ENST00000507650 PGLYRP4Q96LB8 373 aa10.38□□□□□ -0.75
HOXC4-203ENST00000507650 BIN3Q9NQY0 253 aa10.38□□□□□ -0.75
HOXC4-203ENST00000507650 TWIST1Q15672 202 aa10.37□□□□□ -0.75
HOXC4-203ENST00000507650 LCE2DQ5TA82 110 aaPredicted RBP10.37□□□□□ -0.75
HOXC4-203ENST00000507650 TMEM243Q9BU79 118 aa10.37□□□□□ -0.75
HOXC4-203ENST00000507650 A0A1B0GUV1 79 aa10.36□□□□□ -0.75
HOXC4-203ENST00000507650 GAS8-AS1O95177 125 aa10.36□□□□□ -0.75
HOXC4-203ENST00000507650 PLA2G1BP04054 148 aaKnown RBP10.36□□□□□ -0.75
HOXC4-203ENST00000507650 C14orf177Q52M58 125 aa10.36□□□□□ -0.75
HOXC4-203ENST00000507650 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.36□□□□□ -0.75
HOXC4-203ENST00000507650 A0A1B0GVG6 124 aa10.35□□□□□ -0.75
HOXC4-203ENST00000507650 TMEM250H0YL14 139 aa10.35□□□□□ -0.75
HOXC4-203ENST00000507650 SLPIP03973 132 aa10.35□□□□□ -0.75
HOXC4-203ENST00000507650 FAM231DQ6ZW35 169 aa10.34□□□□□ -0.75
HOXC4-203ENST00000507650 C9orf163Q8N9P6 203 aa10.34□□□□□ -0.75
HOXC4-203ENST00000507650 AMTP48728 403 aa10.33□□□□□ -0.76
HOXC4-203ENST00000507650 BLOC1S1P78537 153 aa10.33□□□□□ -0.76
HOXC4-203ENST00000507650 GATCO43716 136 aaKnown RBP10.32□□□□□ -0.76
HOXC4-203ENST00000507650 HNRNPA3P51991 378 aaKnown RBP10.32□□□□□ -0.76
HOXC4-203ENST00000507650 COTL1Q14019 142 aa10.32□□□□□ -0.76
HOXC4-203ENST00000507650 DGAT2L7PQ6IED9 249 aa10.32□□□□□ -0.76
HOXC4-203ENST00000507650 SDIM1Q6ZPB5 146 aa10.32□□□□□ -0.76
HOXC4-203ENST00000507650 KRTAP29-1A8MX34 341 aaPredicted RBP10.31□□□□□ -0.76
HOXC4-203ENST00000507650 LINC01551Q86U37 167 aa10.31□□□□□ -0.76
HOXC4-203ENST00000507650 TRAV8-4A0A0B4J246 113 aa10.3□□□□□ -0.76
HOXC4-203ENST00000507650 FAM231BA6NCW3 169 aa10.3□□□□□ -0.76
HOXC4-203ENST00000507650 CEBPGP53567 150 aa10.3□□□□□ -0.76
HOXC4-203ENST00000507650 CNBPP62633 177 aaKnown RBP10.3□□□□□ -0.76
HOXC4-203ENST00000507650 C15orf56Q8N910 161 aa10.3□□□□□ -0.76
HOXC4-203ENST00000507650 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.29□□□□□ -0.76
HOXC4-203ENST00000507650 IGKV2-29A2NJV5 120 aaPredicted RBP10.29□□□□□ -0.76
HOXC4-203ENST00000507650 SRP19P09132 144 aaKnown RBP10.29□□□□□ -0.76
HOXC4-203ENST00000507650 CIRBPQ14011 172 aaKnown RBP10.29□□□□□ -0.76
HOXC4-203ENST00000507650 CT83Q5H943 113 aa10.29□□□□□ -0.76
HOXC4-203ENST00000507650 RNF185Q96GF1 192 aa10.29□□□□□ -0.76
HOXC4-203ENST00000507650 FAM210AQ96ND0 272 aa10.29□□□□□ -0.76
HOXC4-203ENST00000507650 HMCN2Q8NDA2 5059 aa10.28□□□□□ -0.76
HOXC4-203ENST00000507650 hDV102S1A0JD36 115 aa10.28□□□□□ -0.76
HOXC4-203ENST00000507650 SDHAF1A6NFY7 115 aa10.28□□□□□ -0.76
HOXC4-203ENST00000507650 A8MWL6 223 aa10.28□□□□□ -0.76
HOXC4-203ENST00000507650 RPS10P46783 165 aaKnown RBP10.28□□□□□ -0.76
HOXC4-203ENST00000507650 SMIM7Q9BQ49 75 aa10.28□□□□□ -0.76
HOXC4-203ENST00000507650 GAGE12HA6NDE8 117 aa10.27□□□□□ -0.77
HOXC4-203ENST00000507650 C9JQL5 133 aa10.27□□□□□ -0.77
HOXC4-203ENST00000507650 UBE2L6O14933 153 aa10.27□□□□□ -0.77
HOXC4-203ENST00000507650 CLRN3Q8NCR9 226 aa10.27□□□□□ -0.77
HOXC4-203ENST00000507650 IGKV3OR2-268A0A0C4DH90 116 aa10.26□□□□□ -0.77
HOXC4-203ENST00000507650 TRBV6-5A0A0K0K1A5 114 aa10.26□□□□□ -0.77
HOXC4-203ENST00000507650 J3QL48 77 aa10.26□□□□□ -0.77
HOXC4-203ENST00000507650 NDUFS6O75380 124 aaKnown RBP10.26□□□□□ -0.77
HOXC4-203ENST00000507650 NCR2O95944 276 aa10.26□□□□□ -0.77
HOXC4-203ENST00000507650 TSHBP01222 138 aa10.26□□□□□ -0.77
HOXC4-203ENST00000507650 CHTF8P0CG12 524 aa10.26□□□□□ -0.77
HOXC4-203ENST00000507650 TSKUQ8WUA8 353 aa10.26□□□□□ -0.77
HOXC4-203ENST00000507650 EIF5A2Q9GZV4 153 aaKnown RBP10.26□□□□□ -0.77
HOXC4-203ENST00000507650 V9GYV3 84 aa10.26□□□□□ -0.77
HOXC4-203ENST00000507650 HIGD1CA8MV81 97 aa10.25□□□□□ -0.77
HOXC4-203ENST00000507650 FGF6P10767 208 aa10.25□□□□□ -0.77
HOXC4-203ENST00000507650 ESDP10768 282 aa10.25□□□□□ -0.77
HOXC4-203ENST00000507650 ZNF727A8MUV8 499 aa10.24□□□□□ -0.77
HOXC4-203ENST00000507650 APCSP02743 223 aa10.24□□□□□ -0.77
HOXC4-203ENST00000507650 RAB4AP20338 218 aa10.24□□□□□ -0.77
HOXC4-203ENST00000507650 RPL37AP61513 92 aaKnown RBP10.24□□□□□ -0.77
HOXC4-203ENST00000507650 CHCHD10Q8WYQ3 142 aaPredicted RBP10.24□□□□□ -0.77
HOXC4-203ENST00000507650 OSTCQ9NRP0 149 aa10.24□□□□□ -0.77
HOXC4-203ENST00000507650 POLR2KP53803 58 aaKnown RBP10.23□□□□□ -0.77
HOXC4-203ENST00000507650 SRSF3P84103 164 aaKnown RBP10.23□□□□□ -0.77
HOXC4-203ENST00000507650 FOXI1Q12951 378 aa10.23□□□□□ -0.77
HOXC4-203ENST00000507650 AMN1Q8IY45 258 aa10.23□□□□□ -0.77
HOXC4-203ENST00000507650 ISOC2Q96AB3 205 aa10.23□□□□□ -0.77
HOXC4-203ENST00000507650 TMEM191AQ9H0A3 160 aa10.23□□□□□ -0.77
HOXC4-203ENST00000507650 TMEM242Q9NWH2 141 aa10.23□□□□□ -0.77
HOXC4-203ENST00000507650 A0A1B0GUT8 65 aa10.22□□□□□ -0.77
HOXC4-203ENST00000507650 SMKR1H3BMG3 65 aa10.22□□□□□ -0.77
HOXC4-203ENST00000507650 I3L3M4 83 aa10.22□□□□□ -0.77
HOXC4-203ENST00000507650 HIGD2BQ4VC39 106 aa10.22□□□□□ -0.77
HOXC4-203ENST00000507650 RNASEKQ6P5S7 137 aaKnown RBP10.22□□□□□ -0.77
HOXC4-203ENST00000507650 TEX261Q6UWH6 196 aa10.22□□□□□ -0.77
HOXC4-203ENST00000507650 SMIM15Q7Z3B0 74 aa10.22□□□□□ -0.77
HOXC4-203ENST00000507650 SPACA4Q8TDM5 124 aa10.22□□□□□ -0.77
HOXC4-203ENST00000507650 H7C423 109 aa10.21□□□□□ -0.77
HOXC4-203ENST00000507650 RPL23P62829 140 aaKnown RBP10.21□□□□□ -0.77
HOXC4-203ENST00000507650 AMMECR1LQ6DCA0 310 aa10.21□□□□□ -0.77
HOXC4-203ENST00000507650 NUP35Q8NFH5 326 aa10.21□□□□□ -0.77
HOXC4-203ENST00000507650 IGHV3-64A0A075B6Q5 118 aa10.2□□□□□ -0.78
HOXC4-203ENST00000507650 PMCHP20382 165 aa10.2□□□□□ -0.78
HOXC4-203ENST00000507650 NRACQ8N912 160 aa10.2□□□□□ -0.78
HOXC4-203ENST00000507650 ST20Q9HBF5 79 aa10.2□□□□□ -0.78
HOXC4-203ENST00000507650 A0A087WYN8 130 aa10.19□□□□□ -0.78
HOXC4-203ENST00000507650 GVQW2A0A096LPI5 108 aaPredicted RBP10.19□□□□□ -0.78
HOXC4-203ENST00000507650 TRBV27A0A0K0K1C4 114 aa10.19□□□□□ -0.78
HOXC4-203ENST00000507650 OR5A1Q8NGJ0 315 aa10.19□□□□□ -0.78
HOXC4-203ENST00000507650 LINC00959A0A1B0GUT2 108 aa10.18□□□□□ -0.78
HOXC4-203ENST00000507650 ZNF25P17030 456 aaPredicted RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms