RNA–Protein interactions for RNA: ENST00000507471.1

TSPAN17-206, Transcript of tetraspanin 17, humanhuman

TSL 3

Gene TSPAN17, Length 707 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-206ENST00000507471 FER1L6-AS1Q8NA97 138 aa8.64□□□□□ -1.03
TSPAN17-206ENST00000507471 MBD3L1Q8WWY6 194 aa8.64□□□□□ -1.03
TSPAN17-206ENST00000507471 A0A096LNI7 61 aa8.63□□□□□ -1.03
TSPAN17-206ENST00000507471 IGKV3OR2-268A0A0C4DH90 116 aa8.63□□□□□ -1.03
TSPAN17-206ENST00000507471 ARPC5O15511 151 aa8.63□□□□□ -1.03
TSPAN17-206ENST00000507471 AMTP48728 403 aa8.63□□□□□ -1.03
TSPAN17-206ENST00000507471 SPINK6Q6UWN8 80 aa8.63□□□□□ -1.03
TSPAN17-206ENST00000507471 FAM213BQ8TBF2 198 aa8.63□□□□□ -1.03
TSPAN17-206ENST00000507471 NIT2Q9NQR4 276 aa8.63□□□□□ -1.03
TSPAN17-206ENST00000507471 RPL35P42766 123 aaKnown RBP8.62□□□□□ -1.03
TSPAN17-206ENST00000507471 CACNG7P62955 275 aa8.62□□□□□ -1.03
TSPAN17-206ENST00000507471 COTL1Q14019 142 aa8.62□□□□□ -1.03
TSPAN17-206ENST00000507471 OR2D3Q8NGH3 330 aa8.62□□□□□ -1.03
TSPAN17-206ENST00000507471 GVQW2A0A096LPI5 108 aaPredicted RBP8.61□□□□□ -1.03
TSPAN17-206ENST00000507471 REG3GQ6UW15 175 aa8.61□□□□□ -1.03
TSPAN17-206ENST00000507471 KCNRGQ8N5I3 272 aa8.61□□□□□ -1.03
TSPAN17-206ENST00000507471 CHCHD10Q8WYQ3 142 aaPredicted RBP8.61□□□□□ -1.03
TSPAN17-206ENST00000507471 C19orf71A6NCJ1 209 aa8.6□□□□□ -1.03
TSPAN17-206ENST00000507471 GAS8-AS1O95177 125 aa8.6□□□□□ -1.03
TSPAN17-206ENST00000507471 TRGC1P0CF51 173 aa8.6□□□□□ -1.03
TSPAN17-206ENST00000507471 RPS20P60866 119 aaKnown RBP8.6□□□□□ -1.03
TSPAN17-206ENST00000507471 UMAD1C9J7I0 102 aa8.59□□□□□ -1.03
TSPAN17-206ENST00000507471 NTF3P20783 257 aa8.59□□□□□ -1.03
TSPAN17-206ENST00000507471 SRSF9Q13242 221 aaKnown RBP eCLIP8.59□□□□□ -1.03
TSPAN17-206ENST00000507471 CENPWQ5EE01 88 aa8.59□□□□□ -1.03
TSPAN17-206ENST00000507471 LYZL1Q6UWQ5 148 aa8.59□□□□□ -1.03
TSPAN17-206ENST00000507471 C11orf52Q96A22 123 aa8.59□□□□□ -1.03
TSPAN17-206ENST00000507471 F2Z2F3 143 aa8.58□□□□□ -1.04
TSPAN17-206ENST00000507471 H2AFB1P0C5Y9 115 aa8.58□□□□□ -1.04
TSPAN17-206ENST00000507471 FOXI1Q12951 378 aa8.58□□□□□ -1.04
TSPAN17-206ENST00000507471 LINC00474Q9P2X8 69 aa8.58□□□□□ -1.04
TSPAN17-206ENST00000507471 AMMECR1LQ6DCA0 310 aa8.57□□□□□ -1.04
TSPAN17-206ENST00000507471 Q6ZNX1 250 aa8.57□□□□□ -1.04
TSPAN17-206ENST00000507471 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.56□□□□□ -1.04
TSPAN17-206ENST00000507471 TRAV26-2A0A0B4J265 109 aa8.56□□□□□ -1.04
TSPAN17-206ENST00000507471 IGKV2-29A2NJV5 120 aaPredicted RBP8.56□□□□□ -1.04
TSPAN17-206ENST00000507471 XKRY2A2RUG3 117 aa8.56□□□□□ -1.04
TSPAN17-206ENST00000507471 SMLR1H3BR10 107 aa8.56□□□□□ -1.04
TSPAN17-206ENST00000507471 RNASEKQ6P5S7 137 aaKnown RBP8.56□□□□□ -1.04
TSPAN17-206ENST00000507471 Q6ZRP5 223 aa8.56□□□□□ -1.04
TSPAN17-206ENST00000507471 GATD1Q8NB37 220 aa8.56□□□□□ -1.04
TSPAN17-206ENST00000507471 RAB19A4D1S5 217 aa8.55□□□□□ -1.04
TSPAN17-206ENST00000507471 IFNA1P01562 189 aa8.55□□□□□ -1.04
TSPAN17-206ENST00000507471 CCL20P78556 96 aa8.55□□□□□ -1.04
TSPAN17-206ENST00000507471 ZNF345Q14585 488 aa8.55□□□□□ -1.04
TSPAN17-206ENST00000507471 SMIM12Q96EX1 92 aa8.55□□□□□ -1.04
TSPAN17-206ENST00000507471 LINC00526Q96FQ7 95 aa8.55□□□□□ -1.04
TSPAN17-206ENST00000507471 MANBALQ9NQG1 85 aa8.55□□□□□ -1.04
TSPAN17-206ENST00000507471 GNG13Q9P2W3 67 aa8.55□□□□□ -1.04
TSPAN17-206ENST00000507471 H7C423 109 aa8.54□□□□□ -1.04
TSPAN17-206ENST00000507471 NCR2O95944 276 aa8.54□□□□□ -1.04
TSPAN17-206ENST00000507471 FGF6P10767 208 aa8.54□□□□□ -1.04
TSPAN17-206ENST00000507471 CTRLP40313 264 aa8.54□□□□□ -1.04
TSPAN17-206ENST00000507471 C9orf62Q8N4C0 152 aa8.54□□□□□ -1.04
TSPAN17-206ENST00000507471 CARD19Q96LW7 228 aa8.54□□□□□ -1.04
TSPAN17-206ENST00000507471 PKIGQ9Y2B9 76 aa8.54□□□□□ -1.04
TSPAN17-206ENST00000507471 TRBV20OR9-2A0A075B6H5 130 aa8.53□□□□□ -1.04
TSPAN17-206ENST00000507471 APCSP02743 223 aa8.53□□□□□ -1.04
TSPAN17-206ENST00000507471 XCL1P47992 114 aa8.53□□□□□ -1.04
TSPAN17-206ENST00000507471 GNG4P50150 75 aa8.53□□□□□ -1.04
TSPAN17-206ENST00000507471 TWIST1Q15672 202 aa8.53□□□□□ -1.04
TSPAN17-206ENST00000507471 OR5A1Q8NGJ0 315 aa8.53□□□□□ -1.04
TSPAN17-206ENST00000507471 RPL39LQ96EH5 51 aaKnown RBP8.53□□□□□ -1.04
TSPAN17-206ENST00000507471 IGHV1-58A0A0C4DH39 117 aa8.52□□□□□ -1.05
TSPAN17-206ENST00000507471 LINC00959A0A1B0GUT2 108 aa8.52□□□□□ -1.05
TSPAN17-206ENST00000507471 CCL25O15444 150 aa8.52□□□□□ -1.05
TSPAN17-206ENST00000507471 CNFNQ9BYD5 112 aa8.52□□□□□ -1.05
TSPAN17-206ENST00000507471 BCL2L11O43521 198 aa8.51□□□□□ -1.05
TSPAN17-206ENST00000507471 ZNF25P17030 456 aaPredicted RBP8.51□□□□□ -1.05
TSPAN17-206ENST00000507471 NUDT10Q8NFP7 164 aa8.51□□□□□ -1.05
TSPAN17-206ENST00000507471 NUDT11Q96G61 164 aa8.51□□□□□ -1.05
TSPAN17-206ENST00000507471 KANTRA0A1W2PQU2 76 aa8.5□□□□□ -1.05
TSPAN17-206ENST00000507471 SDHAF1A6NFY7 115 aa8.5□□□□□ -1.05
TSPAN17-206ENST00000507471 PTTG1IPP53801 180 aa8.5□□□□□ -1.05
TSPAN17-206ENST00000507471 SYCNQ0VAF6 134 aa8.5□□□□□ -1.05
TSPAN17-206ENST00000507471 BIN3Q9NQY0 253 aa8.5□□□□□ -1.05
TSPAN17-206ENST00000507471 LPAP08519 4548 aa8.5□□□□□ -1.05
TSPAN17-206ENST00000507471 TRAV1-1A0A0B4J248 108 aa8.49□□□□□ -1.05
TSPAN17-206ENST00000507471 FAM231BA6NCW3 169 aa8.49□□□□□ -1.05
TSPAN17-206ENST00000507471 ZNF561-AS1K7EIQ3 104 aa8.49□□□□□ -1.05
TSPAN17-206ENST00000507471 FOXA3P55318 350 aaPredicted RBP8.49□□□□□ -1.05
TSPAN17-206ENST00000507471 MEF2BQ02080 365 aaPredicted RBP8.49□□□□□ -1.05
TSPAN17-206ENST00000507471 TMEM101Q96IK0 257 aa8.49□□□□□ -1.05
TSPAN17-206ENST00000507471 BTF3L4Q96K17 158 aa8.49□□□□□ -1.05
TSPAN17-206ENST00000507471 A0A1W2PNN7 141 aa8.48□□□□□ -1.05
TSPAN17-206ENST00000507471 HMSDA8MTL9 139 aa8.48□□□□□ -1.05
TSPAN17-206ENST00000507471 PDE6DO43924 150 aa8.48□□□□□ -1.05
TSPAN17-206ENST00000507471 CAMPP49913 170 aa8.48□□□□□ -1.05
TSPAN17-206ENST00000507471 GAGE2BQ13066 116 aa8.48□□□□□ -1.05
TSPAN17-206ENST00000507471 RPP21Q9H633 154 aaKnown RBP8.48□□□□□ -1.05
TSPAN17-206ENST00000507471 MED9Q9NWA0 146 aa8.48□□□□□ -1.05
TSPAN17-206ENST00000507471 LOC107984640A0A0U1RRK4 108 aa8.47□□□□□ -1.05
TSPAN17-206ENST00000507471 I3L3M4 83 aa8.47□□□□□ -1.05
TSPAN17-206ENST00000507471 ESDP10768 282 aa8.47□□□□□ -1.05
TSPAN17-206ENST00000507471 PMCHP20382 165 aa8.47□□□□□ -1.05
TSPAN17-206ENST00000507471 EIF5AP63241 154 aaKnown RBP8.47□□□□□ -1.05
TSPAN17-206ENST00000507471 CD164L2Q6UWJ8 174 aa8.47□□□□□ -1.05
TSPAN17-206ENST00000507471 RNASE7Q9H1E1 156 aaKnown RBP8.47□□□□□ -1.05
TSPAN17-206ENST00000507471 PSORS1C2Q9UIG4 136 aa8.47□□□□□ -1.05
TSPAN17-206ENST00000507471 IGLV4-69A0A075B6H9 119 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms