RNA–Protein interactions for RNA: ENST00000507395.1

SFXN1-207, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 527 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-207ENST00000507395 C14orf177Q52M58 125 aa11.45□□□□□ -0.58
SFXN1-207ENST00000507395 FAT3Q8TDW7 4589 aa11.44□□□□□ -0.58
SFXN1-207ENST00000507395 HLA-DQA1P01909 254 aa11.44□□□□□ -0.58
SFXN1-207ENST00000507395 FOXA3P55318 350 aaPredicted RBP11.44□□□□□ -0.58
SFXN1-207ENST00000507395 TWIST1Q15672 202 aa11.44□□□□□ -0.58
SFXN1-207ENST00000507395 FAM231DQ6ZW35 169 aa11.44□□□□□ -0.58
SFXN1-207ENST00000507395 CIRBP-AS1Q8TBR5 109 aa11.44□□□□□ -0.58
SFXN1-207ENST00000507395 DEFB104AQ8WTQ1 72 aa11.44□□□□□ -0.58
SFXN1-207ENST00000507395 REG3AQ06141 175 aa11.43□□□□□ -0.58
SFXN1-207ENST00000507395 TMEM243Q9BU79 118 aa11.43□□□□□ -0.58
SFXN1-207ENST00000507395 TRAV26-2A0A0B4J265 109 aa11.42□□□□□ -0.58
SFXN1-207ENST00000507395 PKHD1L1Q86WI1 4243 aa11.42□□□□□ -0.58
SFXN1-207ENST00000507395 DGAT2L7PQ6IED9 249 aa11.41□□□□□ -0.58
SFXN1-207ENST00000507395 C9orf163Q8N9P6 203 aa11.41□□□□□ -0.58
SFXN1-207ENST00000507395 IGLV10-54A0A075B6I4 117 aa11.4□□□□□ -0.58
SFXN1-207ENST00000507395 GATCO43716 136 aaKnown RBP11.4□□□□□ -0.58
SFXN1-207ENST00000507395 NDUFS6O75380 124 aaKnown RBP11.4□□□□□ -0.58
SFXN1-207ENST00000507395 PLA2G1BP04054 148 aaKnown RBP11.4□□□□□ -0.58
SFXN1-207ENST00000507395 RPL39LQ96EH5 51 aaKnown RBP11.4□□□□□ -0.58
SFXN1-207ENST00000507395 TRAV8-4A0A0B4J246 113 aa11.39□□□□□ -0.59
SFXN1-207ENST00000507395 COTL1Q14019 142 aa11.39□□□□□ -0.59
SFXN1-207ENST00000507395 CT83Q5H943 113 aa11.39□□□□□ -0.59
SFXN1-207ENST00000507395 A0A1B0GVG6 124 aa11.38□□□□□ -0.59
SFXN1-207ENST00000507395 AMTP48728 403 aa11.38□□□□□ -0.59
SFXN1-207ENST00000507395 LINC01551Q86U37 167 aa11.38□□□□□ -0.59
SFXN1-207ENST00000507395 FAM210AQ96ND0 272 aa11.38□□□□□ -0.59
SFXN1-207ENST00000507395 A8MWL6 223 aa11.37□□□□□ -0.59
SFXN1-207ENST00000507395 PANO1I0J062 215 aa11.37□□□□□ -0.59
SFXN1-207ENST00000507395 GAS8-AS1O95177 125 aa11.37□□□□□ -0.59
SFXN1-207ENST00000507395 SDIM1Q6ZPB5 146 aa11.37□□□□□ -0.59
SFXN1-207ENST00000507395 SLPIP03973 132 aa11.36□□□□□ -0.59
SFXN1-207ENST00000507395 SRP19P09132 144 aaKnown RBP11.36□□□□□ -0.59
SFXN1-207ENST00000507395 CLRN3Q8NCR9 226 aa11.36□□□□□ -0.59
SFXN1-207ENST00000507395 TRBV6-5A0A0K0K1A5 114 aa11.35□□□□□ -0.59
SFXN1-207ENST00000507395 CEBPGP53567 150 aa11.35□□□□□ -0.59
SFXN1-207ENST00000507395 CNBPP62633 177 aaKnown RBP11.35□□□□□ -0.59
SFXN1-207ENST00000507395 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.35□□□□□ -0.59
SFXN1-207ENST00000507395 FAM231BA6NCW3 169 aa11.34□□□□□ -0.59
SFXN1-207ENST00000507395 SDHAF1A6NFY7 115 aa11.34□□□□□ -0.59
SFXN1-207ENST00000507395 KRTAP29-1A8MX34 341 aaPredicted RBP11.34□□□□□ -0.59
SFXN1-207ENST00000507395 NCR2O95944 276 aa11.34□□□□□ -0.59
SFXN1-207ENST00000507395 TEX261Q6UWH6 196 aa11.34□□□□□ -0.59
SFXN1-207ENST00000507395 SMIM7Q9BQ49 75 aa11.34□□□□□ -0.59
SFXN1-207ENST00000507395 EIF5A2Q9GZV4 153 aaKnown RBP11.34□□□□□ -0.59
SFXN1-207ENST00000507395 UBE2L6O14933 153 aa11.33□□□□□ -0.6
SFXN1-207ENST00000507395 CIRBPQ14011 172 aaKnown RBP11.33□□□□□ -0.6
SFXN1-207ENST00000507395 TSKUQ8WUA8 353 aa11.33□□□□□ -0.6
SFXN1-207ENST00000507395 RNF185Q96GF1 192 aa11.33□□□□□ -0.6
SFXN1-207ENST00000507395 OSTCQ9NRP0 149 aa11.33□□□□□ -0.6
SFXN1-207ENST00000507395 HIGD1CA8MV81 97 aa11.32□□□□□ -0.6
SFXN1-207ENST00000507395 SMIM15Q7Z3B0 74 aa11.32□□□□□ -0.6
SFXN1-207ENST00000507395 C15orf56Q8N910 161 aa11.32□□□□□ -0.6
SFXN1-207ENST00000507395 V9GYV3 84 aa11.32□□□□□ -0.6
SFXN1-207ENST00000507395 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.31□□□□□ -0.6
SFXN1-207ENST00000507395 IGKV2-29A2NJV5 120 aaPredicted RBP11.31□□□□□ -0.6
SFXN1-207ENST00000507395 ZNF727A8MUV8 499 aa11.31□□□□□ -0.6
SFXN1-207ENST00000507395 H7C423 109 aa11.31□□□□□ -0.6
SFXN1-207ENST00000507395 ESDP10768 282 aa11.31□□□□□ -0.6
SFXN1-207ENST00000507395 TMEM191AQ9H0A3 160 aa11.31□□□□□ -0.6
SFXN1-207ENST00000507395 A0A1B0GUT8 65 aa11.3□□□□□ -0.6
SFXN1-207ENST00000507395 hDV102S1A0JD36 115 aa11.3□□□□□ -0.6
SFXN1-207ENST00000507395 C9JQL5 133 aa11.3□□□□□ -0.6
SFXN1-207ENST00000507395 RAB4AP20338 218 aa11.3□□□□□ -0.6
SFXN1-207ENST00000507395 POLR2KP53803 58 aaKnown RBP11.3□□□□□ -0.6
SFXN1-207ENST00000507395 GAGE12HA6NDE8 117 aa11.29□□□□□ -0.6
SFXN1-207ENST00000507395 I3L3M4 83 aa11.29□□□□□ -0.6
SFXN1-207ENST00000507395 TSHBP01222 138 aa11.29□□□□□ -0.6
SFXN1-207ENST00000507395 APCSP02743 223 aa11.29□□□□□ -0.6
SFXN1-207ENST00000507395 FGF6P10767 208 aa11.29□□□□□ -0.6
SFXN1-207ENST00000507395 RPS10P46783 165 aaKnown RBP11.29□□□□□ -0.6
SFXN1-207ENST00000507395 ISOC2Q96AB3 205 aa11.29□□□□□ -0.6
SFXN1-207ENST00000507395 PMCHP20382 165 aa11.27□□□□□ -0.61
SFXN1-207ENST00000507395 RPL23P62829 140 aaKnown RBP11.27□□□□□ -0.61
SFXN1-207ENST00000507395 AMN1Q8IY45 258 aa11.27□□□□□ -0.61
SFXN1-207ENST00000507395 NUP35Q8NFH5 326 aa11.27□□□□□ -0.61
SFXN1-207ENST00000507395 HMCN2Q8NDA2 5059 aa11.27□□□□□ -0.61
SFXN1-207ENST00000507395 IGKV3OR2-268A0A0C4DH90 116 aa11.26□□□□□ -0.61
SFXN1-207ENST00000507395 TRBV27A0A0K0K1C4 114 aa11.26□□□□□ -0.61
SFXN1-207ENST00000507395 J3QL48 77 aa11.26□□□□□ -0.61
SFXN1-207ENST00000507395 ZNF25P17030 456 aaPredicted RBP11.26□□□□□ -0.61
SFXN1-207ENST00000507395 HNRNPA3P51991 378 aaKnown RBP11.26□□□□□ -0.61
SFXN1-207ENST00000507395 SRSF3P84103 164 aaKnown RBP11.26□□□□□ -0.61
SFXN1-207ENST00000507395 AMMECR1LQ6DCA0 310 aa11.26□□□□□ -0.61
SFXN1-207ENST00000507395 RNASEKQ6P5S7 137 aaKnown RBP11.26□□□□□ -0.61
SFXN1-207ENST00000507395 CHCHD10Q8WYQ3 142 aaPredicted RBP11.26□□□□□ -0.61
SFXN1-207ENST00000507395 BORCS7Q96B45 105 aa11.26□□□□□ -0.61
SFXN1-207ENST00000507395 ST20Q9HBF5 79 aa11.26□□□□□ -0.61
SFXN1-207ENST00000507395 FOXI1Q12951 378 aa11.25□□□□□ -0.61
SFXN1-207ENST00000507395 TMEM241Q24JQ0 296 aa11.25□□□□□ -0.61
SFXN1-207ENST00000507395 FAM74A3Q4VXF1 159 aa11.25□□□□□ -0.61
SFXN1-207ENST00000507395 OR5A1Q8NGJ0 315 aa11.25□□□□□ -0.61
SFXN1-207ENST00000507395 MRAP2Q96G30 205 aa11.25□□□□□ -0.61
SFXN1-207ENST00000507395 TMEM242Q9NWH2 141 aa11.25□□□□□ -0.61
SFXN1-207ENST00000507395 IGHV3-64A0A075B6Q5 118 aa11.24□□□□□ -0.61
SFXN1-207ENST00000507395 RPL37AP61513 92 aaKnown RBP11.24□□□□□ -0.61
SFXN1-207ENST00000507395 MRPL52Q86TS9 123 aaKnown RBP11.24□□□□□ -0.61
SFXN1-207ENST00000507395 NRACQ8N912 160 aa11.24□□□□□ -0.61
SFXN1-207ENST00000507395 SMKR1H3BMG3 65 aa11.23□□□□□ -0.61
SFXN1-207ENST00000507395 CHTF8P0CG12 524 aa11.23□□□□□ -0.61
SFXN1-207ENST00000507395 SPACA4Q8TDM5 124 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms