RNA–Protein interactions for RNA: ENST00000507302.6

SNF8-205, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-205ENST00000507302 DEFA1P59665 94 aa10.08□□□□□ -0.8
SNF8-205ENST00000507302 SSTP61278 116 aa10.08□□□□□ -0.8
SNF8-205ENST00000507302 FOXI1Q12951 378 aa10.08□□□□□ -0.8
SNF8-205ENST00000507302 SCO2A0A1W2PP80 73 aa10.07□□□□□ -0.8
SNF8-205ENST00000507302 UBE2L6O14933 153 aa10.07□□□□□ -0.8
SNF8-205ENST00000507302 MGPP08493 103 aa10.07□□□□□ -0.8
SNF8-205ENST00000507302 AMTP48728 403 aa10.07□□□□□ -0.8
SNF8-205ENST00000507302 FAM231BA6NCW3 169 aa10.06□□□□□ -0.8
SNF8-205ENST00000507302 COTL1Q14019 142 aa10.06□□□□□ -0.8
SNF8-205ENST00000507302 CYTL1Q9NRR1 136 aa10.06□□□□□ -0.8
SNF8-205ENST00000507302 GIPP09681 153 aaPredicted RBP10.05□□□□□ -0.8
SNF8-205ENST00000507302 CACNG7P62955 275 aa10.05□□□□□ -0.8
SNF8-205ENST00000507302 MBD3L1Q8WWY6 194 aa10.05□□□□□ -0.8
SNF8-205ENST00000507302 H7C423 109 aa10.04□□□□□ -0.8
SNF8-205ENST00000507302 TMUB2Q71RG4 321 aa10.04□□□□□ -0.8
SNF8-205ENST00000507302 ZNF664Q8N3J9 261 aa10.04□□□□□ -0.8
SNF8-205ENST00000507302 FER1L6-AS1Q8NA97 138 aa10.04□□□□□ -0.8
SNF8-205ENST00000507302 PSORS1C2Q9UIG4 136 aa10.04□□□□□ -0.8
SNF8-205ENST00000507302 C19orf71A6NCJ1 209 aa10.03□□□□□ -0.8
SNF8-205ENST00000507302 NTF3P20783 257 aa10.03□□□□□ -0.8
SNF8-205ENST00000507302 F2Z2F3 143 aa10.02□□□□□ -0.81
SNF8-205ENST00000507302 G3V3Q6 166 aa10.02□□□□□ -0.81
SNF8-205ENST00000507302 PTTG1IPP53801 180 aa10.02□□□□□ -0.81
SNF8-205ENST00000507302 RPS20P60866 119 aaKnown RBP10.02□□□□□ -0.81
SNF8-205ENST00000507302 CARD19Q96LW7 228 aa10.02□□□□□ -0.81
SNF8-205ENST00000507302 IGHV1-58A0A0C4DH39 117 aa10.01□□□□□ -0.81
SNF8-205ENST00000507302 IGKV3OR2-268A0A0C4DH90 116 aa10.01□□□□□ -0.81
SNF8-205ENST00000507302 NCR2O95944 276 aa10.01□□□□□ -0.81
SNF8-205ENST00000507302 TRGC1P0CF51 173 aa10.01□□□□□ -0.81
SNF8-205ENST00000507302 RPL35P42766 123 aaKnown RBP10.01□□□□□ -0.81
SNF8-205ENST00000507302 OR5A1Q8NGJ0 315 aa10.01□□□□□ -0.81
SNF8-205ENST00000507302 FXYD6-FXYD2A0A087WZ82 144 aa10□□□□□ -0.81
SNF8-205ENST00000507302 A0A1W2PNN7 141 aa10□□□□□ -0.81
SNF8-205ENST00000507302 Q6ZNX1 250 aa10□□□□□ -0.81
SNF8-205ENST00000507302 C11orf52Q96A22 123 aa10□□□□□ -0.81
SNF8-205ENST00000507302 LINC00526Q96FQ7 95 aa10□□□□□ -0.81
SNF8-205ENST00000507302 CNFNQ9BYD5 112 aa10□□□□□ -0.81
SNF8-205ENST00000507302 PFDN1O60925 122 aa9.99□□□□□ -0.81
SNF8-205ENST00000507302 FGF6P10767 208 aa9.99□□□□□ -0.81
SNF8-205ENST00000507302 ZNF25P17030 456 aaPredicted RBP9.99□□□□□ -0.81
SNF8-205ENST00000507302 SYCNQ0VAF6 134 aa9.99□□□□□ -0.81
SNF8-205ENST00000507302 LCE2AQ5TA79 106 aaPredicted RBP9.99□□□□□ -0.81
SNF8-205ENST00000507302 C9orf62Q8N4C0 152 aa9.99□□□□□ -0.81
SNF8-205ENST00000507302 GATD1Q8NB37 220 aa9.99□□□□□ -0.81
SNF8-205ENST00000507302 OR2D3Q8NGH3 330 aa9.99□□□□□ -0.81
SNF8-205ENST00000507302 SFT2D1Q8WV19 159 aa9.99□□□□□ -0.81
SNF8-205ENST00000507302 TPPP3Q9BW30 176 aa9.99□□□□□ -0.81
SNF8-205ENST00000507302 LINC00959A0A1B0GUT2 108 aa9.98□□□□□ -0.81
SNF8-205ENST00000507302 AMMECR1LQ6DCA0 310 aa9.98□□□□□ -0.81
SNF8-205ENST00000507302 LYZL1Q6UWQ5 148 aa9.98□□□□□ -0.81
SNF8-205ENST00000507302 SMIM12Q96EX1 92 aa9.98□□□□□ -0.81
SNF8-205ENST00000507302 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.97□□□□□ -0.81
SNF8-205ENST00000507302 IGKV2-29A2NJV5 120 aaPredicted RBP9.97□□□□□ -0.81
SNF8-205ENST00000507302 CTRLP40313 264 aa9.97□□□□□ -0.81
SNF8-205ENST00000507302 LOC107984640A0A0U1RRK4 108 aa9.96□□□□□ -0.82
SNF8-205ENST00000507302 UMAD1C9J7I0 102 aa9.96□□□□□ -0.82
SNF8-205ENST00000507302 CCL25O15444 150 aa9.96□□□□□ -0.82
SNF8-205ENST00000507302 XCL1P47992 114 aa9.96□□□□□ -0.82
SNF8-205ENST00000507302 RNASEKQ6P5S7 137 aaKnown RBP9.96□□□□□ -0.82
SNF8-205ENST00000507302 PRR26Q8N8Z3 221 aa9.96□□□□□ -0.82
SNF8-205ENST00000507302 CENPWQ5EE01 88 aa9.95□□□□□ -0.82
SNF8-205ENST00000507302 KCNRGQ8N5I3 272 aa9.95□□□□□ -0.82
SNF8-205ENST00000507302 FAT4Q6V0I7 4981 aa9.95□□□□□ -0.82
SNF8-205ENST00000507302 A0A0U1RQV1 116 aa9.94□□□□□ -0.82
SNF8-205ENST00000507302 KRTAP9-6A0A140TA67 174 aa9.94□□□□□ -0.82
SNF8-205ENST00000507302 XKRY2A2RUG3 117 aa9.94□□□□□ -0.82
SNF8-205ENST00000507302 APCSP02743 223 aa9.94□□□□□ -0.82
SNF8-205ENST00000507302 ESDP10768 282 aa9.94□□□□□ -0.82
SNF8-205ENST00000507302 CAMPP49913 170 aa9.94□□□□□ -0.82
SNF8-205ENST00000507302 CD164L2Q6UWJ8 174 aa9.94□□□□□ -0.82
SNF8-205ENST00000507302 NUP35Q8NFH5 326 aa9.94□□□□□ -0.82
SNF8-205ENST00000507302 FAM213BQ8TBF2 198 aa9.94□□□□□ -0.82
SNF8-205ENST00000507302 TRAV26-2A0A0B4J265 109 aa9.93□□□□□ -0.82
SNF8-205ENST00000507302 ZNF561-AS1K7EIQ3 104 aa9.93□□□□□ -0.82
SNF8-205ENST00000507302 IFNA1P01562 189 aa9.93□□□□□ -0.82
SNF8-205ENST00000507302 MT-ND6P03923 174 aa9.93□□□□□ -0.82
SNF8-205ENST00000507302 C9orf116Q5BN46 136 aaPredicted RBP9.93□□□□□ -0.82
SNF8-205ENST00000507302 RPL39LQ96EH5 51 aaKnown RBP9.93□□□□□ -0.82
SNF8-205ENST00000507302 A0A1B0GV50 99 aa9.92□□□□□ -0.82
SNF8-205ENST00000507302 ARPC5O15511 151 aa9.92□□□□□ -0.82
SNF8-205ENST00000507302 IGLV7-43P04211 117 aa9.92□□□□□ -0.82
SNF8-205ENST00000507302 KRTAP1-4P0C5Y4 121 aa9.92□□□□□ -0.82
SNF8-205ENST00000507302 CCL20P78556 96 aa9.92□□□□□ -0.82
SNF8-205ENST00000507302 GAGE2BQ13066 116 aa9.92□□□□□ -0.82
SNF8-205ENST00000507302 C1orf137Q5JT78 98 aa9.92□□□□□ -0.82
SNF8-205ENST00000507302 DIRC1Q969H9 104 aa9.92□□□□□ -0.82
SNF8-205ENST00000507302 ISOC2Q96AB3 205 aa9.92□□□□□ -0.82
SNF8-205ENST00000507302 FAM210AQ96ND0 272 aa9.92□□□□□ -0.82
SNF8-205ENST00000507302 TRBV20OR9-2A0A075B6H5 130 aa9.91□□□□□ -0.82
SNF8-205ENST00000507302 IGLV4-69A0A075B6H9 119 aa9.91□□□□□ -0.82
SNF8-205ENST00000507302 IGLV1-50A0A075B6I6 118 aa9.91□□□□□ -0.82
SNF8-205ENST00000507302 SDHAF1A6NFY7 115 aa9.91□□□□□ -0.82
SNF8-205ENST00000507302 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.91□□□□□ -0.82
SNF8-205ENST00000507302 MEF2BQ02080 365 aaPredicted RBP9.91□□□□□ -0.82
SNF8-205ENST00000507302 MRPL52Q86TS9 123 aaKnown RBP9.91□□□□□ -0.82
SNF8-205ENST00000507302 CDC42SE2Q9NRR3 84 aa9.91□□□□□ -0.82
SNF8-205ENST00000507302 TRBV6-5A0A0K0K1A5 114 aa9.9□□□□□ -0.82
SNF8-205ENST00000507302 H0Y9J4 135 aa9.9□□□□□ -0.82
SNF8-205ENST00000507302 APOMO95445 188 aa9.9□□□□□ -0.82
SNF8-205ENST00000507302 H2AFB1P0C5Y9 115 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms