RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 GAGE12BA1L429 117 aa8.75□□□□□ -1.01
LIN54-206ENST00000506560 K7EMI3 77 aa8.75□□□□□ -1.01
LIN54-206ENST00000506560 SEC11AP67812 179 aa8.75□□□□□ -1.01
LIN54-206ENST00000506560 SPXQ9BT56 116 aa8.75□□□□□ -1.01
LIN54-206ENST00000506560 CHTOPQ9Y3Y2 248 aaKnown RBP8.75□□□□□ -1.01
LIN54-206ENST00000506560 F8VRH5 84 aa8.74□□□□□ -1.01
LIN54-206ENST00000506560 RS1O15537 224 aa8.74□□□□□ -1.01
LIN54-206ENST00000506560 RIPPLY3P57055 190 aa8.74□□□□□ -1.01
LIN54-206ENST00000506560 TMEM263Q8WUH6 116 aaKnown RBP8.74□□□□□ -1.01
LIN54-206ENST00000506560 FAM110AQ9BQ89 295 aa8.74□□□□□ -1.01
LIN54-206ENST00000506560 I3L3M4 83 aa8.74□□□□□ -1.01
LIN54-206ENST00000506560 MAPKAPK5-AS1Q8N8E1 139 aa8.73□□□□□ -1.01
LIN54-206ENST00000506560 H3BUT2 72 aa8.73□□□□□ -1.01
LIN54-206ENST00000506560 H7C1H1 209 aa8.73□□□□□ -1.01
LIN54-206ENST00000506560 RNASE13Q5GAN3 156 aaKnown RBP8.73□□□□□ -1.01
LIN54-206ENST00000506560 RAB37Q96AX2 223 aa8.73□□□□□ -1.01
LIN54-206ENST00000506560 TNFRSF18Q9Y5U5 241 aa8.73□□□□□ -1.01
LIN54-206ENST00000506560 IGLV4-69A0A075B6H9 119 aa8.73□□□□□ -1.01
LIN54-206ENST00000506560 TRAV12-1A0A0B4J245 112 aa8.73□□□□□ -1.01
LIN54-206ENST00000506560 GAGE10A6NGK3 116 aa8.73□□□□□ -1.01
LIN54-206ENST00000506560 GAGE7O76087 117 aa8.73□□□□□ -1.01
LIN54-206ENST00000506560 GAGE12FP0CL80 117 aa8.73□□□□□ -1.01
LIN54-206ENST00000506560 GAGE12GP0CL81 117 aa8.73□□□□□ -1.01
LIN54-206ENST00000506560 GAGE12IP0CL82 117 aa8.73□□□□□ -1.01
LIN54-206ENST00000506560 C20orf203Q8NBC4 194 aa8.73□□□□□ -1.01
LIN54-206ENST00000506560 FAM104AQ969W3 186 aa8.73□□□□□ -1.01
LIN54-206ENST00000506560 VPS25Q9BRG1 176 aa8.73□□□□□ -1.01
LIN54-206ENST00000506560 C11orf86A6NJI1 115 aa8.72□□□□□ -1.01
LIN54-206ENST00000506560 CMC4P56277 68 aaPredicted RBP8.72□□□□□ -1.01
LIN54-206ENST00000506560 HSD52Q0P140 79 aa8.72□□□□□ -1.01
LIN54-206ENST00000506560 PTH2Q96A98 100 aa8.72□□□□□ -1.01
LIN54-206ENST00000506560 COL6A5A8TX70 2615 aa8.71□□□□□ -1.01
LIN54-206ENST00000506560 C9orf118A6NHY6 69 aa8.71□□□□□ -1.01
LIN54-206ENST00000506560 PIK3CD-AS1Q5SR53 167 aa8.71□□□□□ -1.01
LIN54-206ENST00000506560 EDA2RQ9HAV5 297 aa8.71□□□□□ -1.01
LIN54-206ENST00000506560 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.71□□□□□ -1.02
LIN54-206ENST00000506560 IGKV2-29A2NJV5 120 aaPredicted RBP8.71□□□□□ -1.02
LIN54-206ENST00000506560 A6NDN8 102 aa8.71□□□□□ -1.02
LIN54-206ENST00000506560 H3BRM9 83 aa8.71□□□□□ -1.02
LIN54-206ENST00000506560 LOC100131303A0A0U1RQF7 123 aa8.7□□□□□ -1.02
LIN54-206ENST00000506560 RHOHQ15669 191 aa8.7□□□□□ -1.02
LIN54-206ENST00000506560 RRN3P1Q2M238 152 aa8.7□□□□□ -1.02
LIN54-206ENST00000506560 ZNRF2Q8NHG8 242 aa8.7□□□□□ -1.02
LIN54-206ENST00000506560 CHCHD7Q9BUK0 85 aa8.7□□□□□ -1.02
LIN54-206ENST00000506560 RHODO00212 210 aa8.7□□□□□ -1.02
LIN54-206ENST00000506560 KRTAP24-1Q3LI83 254 aa8.7□□□□□ -1.02
LIN54-206ENST00000506560 C9orf66Q5T8R8 295 aa8.7□□□□□ -1.02
LIN54-206ENST00000506560 SLC25A29Q8N8R3 303 aa8.7□□□□□ -1.02
LIN54-206ENST00000506560 TIMM17AQ99595 171 aa8.7□□□□□ -1.02
LIN54-206ENST00000506560 PLNP26678 52 aa8.69□□□□□ -1.02
LIN54-206ENST00000506560 CMYA5Q8N3K9 4069 aa8.69□□□□□ -1.02
LIN54-206ENST00000506560 PMVKQ15126 192 aa8.69□□□□□ -1.02
LIN54-206ENST00000506560 C16orf74Q96GX8 76 aa8.69□□□□□ -1.02
LIN54-206ENST00000506560 ANK2Q01484 3957 aa8.68□□□□□ -1.02
LIN54-206ENST00000506560 IGLV4-3A0A075B6K6 122 aa8.68□□□□□ -1.02
LIN54-206ENST00000506560 DEFB4AO15263 64 aa8.68□□□□□ -1.02
LIN54-206ENST00000506560 SIVA1O15304 175 aa8.68□□□□□ -1.02
LIN54-206ENST00000506560 TRGV2A0A075B6R0 118 aa8.68□□□□□ -1.02
LIN54-206ENST00000506560 DAZ2Q13117 558 aaKnown RBP8.68□□□□□ -1.02
LIN54-206ENST00000506560 C1QTNF4Q9BXJ3 329 aa8.68□□□□□ -1.02
LIN54-206ENST00000506560 GAGE12JA6NER3 117 aa8.67□□□□□ -1.02
LIN54-206ENST00000506560 GCSHP23434 173 aa8.67□□□□□ -1.02
LIN54-206ENST00000506560 FXYD2P54710 66 aa8.67□□□□□ -1.02
LIN54-206ENST00000506560 GAGE4Q13068 117 aa8.67□□□□□ -1.02
LIN54-206ENST00000506560 GAGE5Q13069 117 aa8.67□□□□□ -1.02
LIN54-206ENST00000506560 GAGE13Q4V321 117 aa8.67□□□□□ -1.02
LIN54-206ENST00000506560 NOTCH1P46531 2555 aa8.67□□□□□ -1.02
LIN54-206ENST00000506560 TRBV25-1A0A075B6N4 114 aa8.67□□□□□ -1.02
LIN54-206ENST00000506560 TRAV4A0A0B4J268 109 aa8.67□□□□□ -1.02
LIN54-206ENST00000506560 K7EP34 96 aa8.67□□□□□ -1.02
LIN54-206ENST00000506560 GTF2H5Q6ZYL4 71 aa8.67□□□□□ -1.02
LIN54-206ENST00000506560 TMEM141Q96I45 108 aa8.67□□□□□ -1.02
LIN54-206ENST00000506560 X6R8D5 127 aa8.67□□□□□ -1.02
LIN54-206ENST00000506560 K7ERU9 68 aa8.67□□□□□ -1.02
LIN54-206ENST00000506560 INSL3P51460 131 aa8.67□□□□□ -1.02
LIN54-206ENST00000506560 DEFB135Q30KP9 77 aa8.67□□□□□ -1.02
LIN54-206ENST00000506560 K7EQD1 137 aa8.66□□□□□ -1.02
LIN54-206ENST00000506560 DEFB130BP0DP73 79 aa8.66□□□□□ -1.02
LIN54-206ENST00000506560 DEFB130AP0DP74 79 aa8.66□□□□□ -1.02
LIN54-206ENST00000506560 PRADC1Q9BSG0 188 aa8.66□□□□□ -1.02
LIN54-206ENST00000506560 A0A0J9YXV3 536 aa8.66□□□□□ -1.02
LIN54-206ENST00000506560 K7ERJ3 54 aa8.66□□□□□ -1.02
LIN54-206ENST00000506560 LINC00694P0DN24 101 aa8.66□□□□□ -1.02
LIN54-206ENST00000506560 COTL1Q14019 142 aa8.66□□□□□ -1.02
LIN54-206ENST00000506560 OXLD1Q5BKU9 147 aa8.66□□□□□ -1.02
LIN54-206ENST00000506560 NTM-AS1Q6ZSK4 140 aa8.66□□□□□ -1.02
LIN54-206ENST00000506560 TRBV7-3A0A075B6L6 115 aa8.65□□□□□ -1.02
LIN54-206ENST00000506560 A0A1W2PPM0 123 aa8.65□□□□□ -1.02
LIN54-206ENST00000506560 TSPEAR-AS2P59090 65 aa8.65□□□□□ -1.02
LIN54-206ENST00000506560 TMEM170BQ5T4T1 132 aa8.65□□□□□ -1.02
LIN54-206ENST00000506560 SPCS1Q9Y6A9 102 aa8.65□□□□□ -1.02
LIN54-206ENST00000506560 IGHV3-64A0A075B6Q5 118 aa8.65□□□□□ -1.03
LIN54-206ENST00000506560 Q6ZUT4 128 aa8.65□□□□□ -1.03
LIN54-206ENST00000506560 OVOL2Q9BRP0 275 aa8.65□□□□□ -1.03
LIN54-206ENST00000506560 CHAC1Q9BUX1 264 aa8.65□□□□□ -1.03
LIN54-206ENST00000506560 UBE2D4Q9Y2X8 147 aa8.65□□□□□ -1.03
LIN54-206ENST00000506560 WFDC9Q8NEX5 89 aa8.64□□□□□ -1.03
LIN54-206ENST00000506560 PRIMA1Q86XR5 153 aa8.63□□□□□ -1.03
LIN54-206ENST00000506560 OR11H2Q8NH07 326 aa8.63□□□□□ -1.03
LIN54-206ENST00000506560 PLEKHB2Q96CS7 222 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms