RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 TRAPPC2BP0DI82 140 aa1.56□□□□□ -2.16
TRAPPC11-205ENST00000506426 HIST1H1BP16401 226 aaKnown RBP1.56□□□□□ -2.16
TRAPPC11-205ENST00000506426 SDC2P34741 201 aa1.56□□□□□ -2.16
TRAPPC11-205ENST00000506426 FUSP35637 526 aaKnown RBP eCLIP1.56□□□□□ -2.16
TRAPPC11-205ENST00000506426 LSM3P62310 102 aaKnown RBP1.56□□□□□ -2.16
TRAPPC11-205ENST00000506426 CATR1Q13166 79 aa1.56□□□□□ -2.16
TRAPPC11-205ENST00000506426 NEDD8Q15843 81 aa1.56□□□□□ -2.16
TRAPPC11-205ENST00000506426 PSMG4Q5JS54 123 aa1.56□□□□□ -2.16
TRAPPC11-205ENST00000506426 TOMM20LQ6UXN7 152 aa1.56□□□□□ -2.16
TRAPPC11-205ENST00000506426 Q6ZS49 121 aa1.56□□□□□ -2.16
TRAPPC11-205ENST00000506426 LHFPL1Q86WI0 220 aa1.56□□□□□ -2.16
TRAPPC11-205ENST00000506426 UBE2DNLQ8IWF7 75 aa1.56□□□□□ -2.16
TRAPPC11-205ENST00000506426 OR4X1Q8NH49 305 aa1.56□□□□□ -2.16
TRAPPC11-205ENST00000506426 TTTY13Q9BZ97 58 aa1.56□□□□□ -2.16
TRAPPC11-205ENST00000506426 C6orf62Q9GZU0 229 aaPredicted RBP1.56□□□□□ -2.16
TRAPPC11-205ENST00000506426 DCSTAMPQ9H295 470 aa1.56□□□□□ -2.16
TRAPPC11-205ENST00000506426 XAGE1AQ9HD64 81 aa1.56□□□□□ -2.16
TRAPPC11-205ENST00000506426 NDUFA4L2Q9NRX3 87 aa1.56□□□□□ -2.16
TRAPPC11-205ENST00000506426 SCN3BQ9NY72 215 aa1.56□□□□□ -2.16
TRAPPC11-205ENST00000506426 SMPXQ9UHP9 88 aa1.56□□□□□ -2.16
TRAPPC11-205ENST00000506426 TPRKBQ9Y3C4 175 aa1.56□□□□□ -2.16
TRAPPC11-205ENST00000506426 DMBT1Q9UGM3 2413 aaPredicted RBP1.56□□□□□ -2.16
TRAPPC11-205ENST00000506426 DEFB131BA0A096LNP1 70 aa1.55□□□□□ -2.16
TRAPPC11-205ENST00000506426 TRAV14DV4A0A0A6YYC5 116 aa1.55□□□□□ -2.16
TRAPPC11-205ENST00000506426 TRAV1-2A0A0B4J238 106 aa1.55□□□□□ -2.16
TRAPPC11-205ENST00000506426 TRAV10A0A0B4J240 114 aa1.55□□□□□ -2.16
TRAPPC11-205ENST00000506426 TRDV1A0A1B0GX56 115 aa1.55□□□□□ -2.16
TRAPPC11-205ENST00000506426 MRPS14O60783 128 aaKnown RBP1.55□□□□□ -2.16
TRAPPC11-205ENST00000506426 PGLYRP1O75594 196 aaPredicted RBP1.55□□□□□ -2.16
TRAPPC11-205ENST00000506426 SNAPC5O75971 98 aa1.55□□□□□ -2.16
TRAPPC11-205ENST00000506426 IGKV1-5P01602 117 aa1.55□□□□□ -2.16
TRAPPC11-205ENST00000506426 PRM2P04554 102 aa1.55□□□□□ -2.16
TRAPPC11-205ENST00000506426 SRP19P09132 144 aaKnown RBP1.55□□□□□ -2.16
TRAPPC11-205ENST00000506426 ZNF705DP0CH99 300 aaPredicted RBP1.55□□□□□ -2.16
TRAPPC11-205ENST00000506426 S100A7P31151 101 aa1.55□□□□□ -2.16
TRAPPC11-205ENST00000506426 HAMPP81172 84 aa1.55□□□□□ -2.16
TRAPPC11-205ENST00000506426 PRCDQ00LT1 54 aa1.55□□□□□ -2.16
TRAPPC11-205ENST00000506426 MIAQ16674 131 aa1.55□□□□□ -2.16
TRAPPC11-205ENST00000506426 KLK9Q2XQG4 91 aa1.55□□□□□ -2.16
TRAPPC11-205ENST00000506426 C12orf74Q32Q52 190 aa1.55□□□□□ -2.16
TRAPPC11-205ENST00000506426 TMEM97Q5BJF2 176 aa1.55□□□□□ -2.16
TRAPPC11-205ENST00000506426 GDF5OSQ5U4N7 250 aa1.55□□□□□ -2.16
TRAPPC11-205ENST00000506426 LPCAT3Q6P1A2 487 aa1.55□□□□□ -2.16
TRAPPC11-205ENST00000506426 PP632Q6XCG6 107 aa1.55□□□□□ -2.16
TRAPPC11-205ENST00000506426 SNX29P2Q8IUI4 249 aa1.55□□□□□ -2.16
TRAPPC11-205ENST00000506426 ZNF471Q9BX82 626 aaPredicted RBP1.55□□□□□ -2.16
TRAPPC11-205ENST00000506426 C8orf4Q9NR00 106 aa1.55□□□□□ -2.16
TRAPPC11-205ENST00000506426 RSL24D1Q9UHA3 163 aaKnown RBP1.55□□□□□ -2.16
TRAPPC11-205ENST00000506426 KLK9Q9UKQ9 250 aa1.55□□□□□ -2.16
TRAPPC11-205ENST00000506426 PKIGQ9Y2B9 76 aa1.55□□□□□ -2.16
TRAPPC11-205ENST00000506426 FAT1Q14517 4588 aa1.55□□□□□ -2.16
TRAPPC11-205ENST00000506426 TRBV20OR9-2A0A075B6H5 130 aa1.54□□□□□ -2.16
TRAPPC11-205ENST00000506426 GPR31O00270 319 aa1.54□□□□□ -2.16
TRAPPC11-205ENST00000506426 CYB5BO43169 146 aa1.54□□□□□ -2.16
TRAPPC11-205ENST00000506426 IFNA10P01566 189 aa1.54□□□□□ -2.16
TRAPPC11-205ENST00000506426 ZNF705BP0CI00 300 aaPredicted RBP1.54□□□□□ -2.16
TRAPPC11-205ENST00000506426 MIFP14174 115 aa1.54□□□□□ -2.16
TRAPPC11-205ENST00000506426 ETV6P41212 452 aa1.54□□□□□ -2.16
TRAPPC11-205ENST00000506426 RPL5P46777 297 aaKnown RBP1.54□□□□□ -2.16
TRAPPC11-205ENST00000506426 CSN1S1P47710 185 aa1.54□□□□□ -2.16
TRAPPC11-205ENST00000506426 NCS1P62166 190 aa1.54□□□□□ -2.16
TRAPPC11-205ENST00000506426 MEF2BQ02080 365 aaPredicted RBP1.54□□□□□ -2.16
TRAPPC11-205ENST00000506426 GUK1Q16774 197 aa1.54□□□□□ -2.16
TRAPPC11-205ENST00000506426 RNASE11Q8TAA1 199 aaKnown RBP1.54□□□□□ -2.16
TRAPPC11-205ENST00000506426 DCANP1Q8TF63 244 aa1.54□□□□□ -2.16
TRAPPC11-205ENST00000506426 BORCS7Q96B45 105 aa1.54□□□□□ -2.16
TRAPPC11-205ENST00000506426 GPR146Q96CH1 333 aa1.54□□□□□ -2.16
TRAPPC11-205ENST00000506426 DGCR14Q96DF8 476 aaKnown RBP1.54□□□□□ -2.16
TRAPPC11-205ENST00000506426 LINC00052Q96N35 136 aa1.54□□□□□ -2.16
TRAPPC11-205ENST00000506426 TP53RKQ96S44 253 aa1.54□□□□□ -2.16
TRAPPC11-205ENST00000506426 GINS3Q9BRX5 216 aa1.54□□□□□ -2.16
TRAPPC11-205ENST00000506426 PBDC1Q9BVG4 233 aa1.54□□□□□ -2.16
TRAPPC11-205ENST00000506426 SLC35B3Q9H1N7 401 aa1.54□□□□□ -2.16
TRAPPC11-205ENST00000506426 TMEM14BQ9NUH8 114 aa1.54□□□□□ -2.16
TRAPPC11-205ENST00000506426 DOK5Q9P104 306 aa1.54□□□□□ -2.16
TRAPPC11-205ENST00000506426 PRNDQ9UKY0 176 aa1.54□□□□□ -2.16
TRAPPC11-205ENST00000506426 SSR3Q9UNL2 185 aa1.54□□□□□ -2.16
TRAPPC11-205ENST00000506426 FUT9Q9Y231 359 aa1.54□□□□□ -2.16
TRAPPC11-205ENST00000506426 TRAV12-2A0A075B6T6 113 aa1.53□□□□□ -2.16
TRAPPC11-205ENST00000506426 MUC21A0A0G2JKD1 596 aa1.53□□□□□ -2.16
TRAPPC11-205ENST00000506426 MUC21A0A140T8X8 626 aa1.53□□□□□ -2.16
TRAPPC11-205ENST00000506426 ZNF705FA8MVS1 300 aaPredicted RBP1.53□□□□□ -2.16
TRAPPC11-205ENST00000506426 FNDC10F2Z333 226 aa1.53□□□□□ -2.16
TRAPPC11-205ENST00000506426 M0R2Z0 102 aa1.53□□□□□ -2.16
TRAPPC11-205ENST00000506426 IFNA17P01571 189 aa1.53□□□□□ -2.16
TRAPPC11-205ENST00000506426 IGLC1P0CG04 106 aa1.53□□□□□ -2.16
TRAPPC11-205ENST00000506426 P0DMU3 169 aa1.53□□□□□ -2.16
TRAPPC11-205ENST00000506426 FAM231AP0DMU4 169 aa1.53□□□□□ -2.16
TRAPPC11-205ENST00000506426 FAM231CP0DMU5 169 aa1.53□□□□□ -2.16
TRAPPC11-205ENST00000506426 DEFB130BP0DP73 79 aa1.53□□□□□ -2.16
TRAPPC11-205ENST00000506426 DEFB130AP0DP74 79 aa1.53□□□□□ -2.16
TRAPPC11-205ENST00000506426 HLA-DRB4P13762 266 aa1.53□□□□□ -2.16
TRAPPC11-205ENST00000506426 SNCAP37840 140 aa1.53□□□□□ -2.16
TRAPPC11-205ENST00000506426 HINT1P49773 126 aaPredicted RBP1.53□□□□□ -2.16
TRAPPC11-205ENST00000506426 PIGPP57054 158 aa1.53□□□□□ -2.16
TRAPPC11-205ENST00000506426 TCTAP57738 103 aa1.53□□□□□ -2.16
TRAPPC11-205ENST00000506426 HSPE1P61604 102 aaKnown RBP1.53□□□□□ -2.16
TRAPPC11-205ENST00000506426 MSMO1Q15800 293 aa1.53□□□□□ -2.16
TRAPPC11-205ENST00000506426 SCGB2B2Q4G0G5 96 aa1.53□□□□□ -2.16
TRAPPC11-205ENST00000506426 C1orf134Q5TEV5 83 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms