RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 EREGO14944 169 aa11.8□□□□□ -0.52
SMN1-204ENST00000506163 ANGP03950 147 aaKnown RBP11.8□□□□□ -0.52
SMN1-204ENST00000506163 CAMPP49913 170 aa11.8□□□□□ -0.52
SMN1-204ENST00000506163 COTL1Q14019 142 aa11.8□□□□□ -0.52
SMN1-204ENST00000506163 IGLV4-60A0A075B6I1 120 aa11.79□□□□□ -0.52
SMN1-204ENST00000506163 IGKV2D-24A0A075B6R9 120 aa11.79□□□□□ -0.52
SMN1-204ENST00000506163 A0A1B0GXF2 115 aa11.79□□□□□ -0.52
SMN1-204ENST00000506163 NCR2O95944 276 aa11.79□□□□□ -0.52
SMN1-204ENST00000506163 FAM104BQ5XKR9 115 aa11.79□□□□□ -0.52
SMN1-204ENST00000506163 MRPL54Q6P161 138 aaKnown RBP11.79□□□□□ -0.52
SMN1-204ENST00000506163 C20orf203Q8NBC4 194 aa11.79□□□□□ -0.52
SMN1-204ENST00000506163 BAALCQ8WXS3 180 aa11.79□□□□□ -0.52
SMN1-204ENST00000506163 MRAP2Q96G30 205 aa11.79□□□□□ -0.52
SMN1-204ENST00000506163 PRR34Q9NV39 138 aa11.79□□□□□ -0.52
SMN1-204ENST00000506163 LECT2O14960 151 aa11.78□□□□□ -0.52
SMN1-204ENST00000506163 AMTP48728 403 aa11.78□□□□□ -0.52
SMN1-204ENST00000506163 POLR2KP53803 58 aaKnown RBP11.78□□□□□ -0.52
SMN1-204ENST00000506163 MRPL51Q4U2R6 128 aaKnown RBP11.78□□□□□ -0.52
SMN1-204ENST00000506163 Q8N814 137 aa11.78□□□□□ -0.52
SMN1-204ENST00000506163 NRACQ8N912 160 aa11.78□□□□□ -0.52
SMN1-204ENST00000506163 TMEM218A2RU14 115 aa11.77□□□□□ -0.52
SMN1-204ENST00000506163 PKIAP61925 76 aa11.77□□□□□ -0.52
SMN1-204ENST00000506163 PNRC1Q12796 327 aaPredicted RBP11.77□□□□□ -0.52
SMN1-204ENST00000506163 UQCC3Q6UW78 93 aa11.77□□□□□ -0.52
SMN1-204ENST00000506163 CLPSL2Q6UWE3 100 aa11.77□□□□□ -0.52
SMN1-204ENST00000506163 LINC00269Q8N2A0 174 aa11.77□□□□□ -0.52
SMN1-204ENST00000506163 TMEM70Q9BUB7 260 aa11.77□□□□□ -0.52
SMN1-204ENST00000506163 A0A1B0GUV1 79 aa11.77□□□□□ -0.53
SMN1-204ENST00000506163 KRTAP10-1P60331 282 aa11.77□□□□□ -0.53
SMN1-204ENST00000506163 Q0VG73 95 aa11.77□□□□□ -0.53
SMN1-204ENST00000506163 KRTAP26-1Q6PEX3 210 aa11.77□□□□□ -0.53
SMN1-204ENST00000506163 ST20Q9HBF5 79 aa11.77□□□□□ -0.53
SMN1-204ENST00000506163 I3L3M4 83 aa11.76□□□□□ -0.53
SMN1-204ENST00000506163 PPP1R2P9O14990 202 aa11.76□□□□□ -0.53
SMN1-204ENST00000506163 TSHBP01222 138 aa11.76□□□□□ -0.53
SMN1-204ENST00000506163 CDPF1Q6NVV7 123 aa11.76□□□□□ -0.53
SMN1-204ENST00000506163 RMI2Q96E14 147 aa11.76□□□□□ -0.53
SMN1-204ENST00000506163 A0A1B0GW15 77 aa11.75□□□□□ -0.53
SMN1-204ENST00000506163 PMCHP20382 165 aa11.75□□□□□ -0.53
SMN1-204ENST00000506163 HBBP68871 147 aa11.75□□□□□ -0.53
SMN1-204ENST00000506163 COX11Q9Y6N1 276 aa11.75□□□□□ -0.53
SMN1-204ENST00000506163 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.74□□□□□ -0.53
SMN1-204ENST00000506163 TRBV27A0A0K0K1C4 114 aa11.74□□□□□ -0.53
SMN1-204ENST00000506163 IGKV2-29A2NJV5 120 aaPredicted RBP11.74□□□□□ -0.53
SMN1-204ENST00000506163 MT-ND4LP03901 98 aa11.74□□□□□ -0.53
SMN1-204ENST00000506163 COMMD7Q86VX2 200 aa11.74□□□□□ -0.53
SMN1-204ENST00000506163 ANAPC16Q96DE5 110 aa11.74□□□□□ -0.53
SMN1-204ENST00000506163 TMEM242Q9NWH2 141 aa11.74□□□□□ -0.53
SMN1-204ENST00000506163 F8W036 122 aa11.73□□□□□ -0.53
SMN1-204ENST00000506163 CRPP02741 224 aa11.73□□□□□ -0.53
SMN1-204ENST00000506163 ESDP10768 282 aa11.73□□□□□ -0.53
SMN1-204ENST00000506163 REG3AQ06141 175 aa11.73□□□□□ -0.53
SMN1-204ENST00000506163 MIAQ16674 131 aa11.73□□□□□ -0.53
SMN1-204ENST00000506163 C1orf43Q9BWL3 253 aa11.73□□□□□ -0.53
SMN1-204ENST00000506163 LINC00862A6NCI5 91 aa11.72□□□□□ -0.53
SMN1-204ENST00000506163 UBE2L6O14933 153 aa11.72□□□□□ -0.53
SMN1-204ENST00000506163 CDK2AP2O75956 126 aa11.72□□□□□ -0.53
SMN1-204ENST00000506163 APCSP02743 223 aa11.72□□□□□ -0.53
SMN1-204ENST00000506163 IGLV5-52A0A0A0MRZ9 124 aa11.71□□□□□ -0.53
SMN1-204ENST00000506163 SUMO2P61956 95 aaKnown RBP11.71□□□□□ -0.53
SMN1-204ENST00000506163 IGLV10-54A0A075B6I4 117 aa11.7□□□□□ -0.54
SMN1-204ENST00000506163 TRBV24-1A0A075B6N3 115 aa11.7□□□□□ -0.54
SMN1-204ENST00000506163 FGF6P10767 208 aa11.7□□□□□ -0.54
SMN1-204ENST00000506163 ATP5L2Q7Z4Y8 100 aa11.7□□□□□ -0.54
SMN1-204ENST00000506163 NTN5Q8WTR8 489 aaPredicted RBP11.7□□□□□ -0.54
SMN1-204ENST00000506163 DNAH8Q96JB1 4490 aa11.7□□□□□ -0.54
SMN1-204ENST00000506163 D6R8Y8 96 aa11.69□□□□□ -0.54
SMN1-204ENST00000506163 VCYO14598 125 aa11.69□□□□□ -0.54
SMN1-204ENST00000506163 GCSHP23434 173 aa11.69□□□□□ -0.54
SMN1-204ENST00000506163 CKS2P33552 79 aa11.69□□□□□ -0.54
SMN1-204ENST00000506163 SEC11CQ9BY50 192 aa11.69□□□□□ -0.54
SMN1-204ENST00000506163 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.69□□□□□ -0.54
SMN1-204ENST00000506163 H7C423 109 aa11.69□□□□□ -0.54
SMN1-204ENST00000506163 TNFRSF6BO95407 300 aa11.69□□□□□ -0.54
SMN1-204ENST00000506163 S100A8P05109 93 aa11.69□□□□□ -0.54
SMN1-204ENST00000506163 KRTAP4-5Q9BYR2 181 aa11.69□□□□□ -0.54
SMN1-204ENST00000506163 PPP1R17O96001 155 aa11.68□□□□□ -0.54
SMN1-204ENST00000506163 NPYP01303 97 aa11.68□□□□□ -0.54
SMN1-204ENST00000506163 XGP55808 180 aa11.68□□□□□ -0.54
SMN1-204ENST00000506163 C10orf91Q5T1B1 145 aa11.68□□□□□ -0.54
SMN1-204ENST00000506163 RNASEKQ6P5S7 137 aaKnown RBP11.68□□□□□ -0.54
SMN1-204ENST00000506163 HLA-DQA1P01909 254 aa11.67□□□□□ -0.54
SMN1-204ENST00000506163 C20orf78Q9BR46 151 aa11.67□□□□□ -0.54
SMN1-204ENST00000506163 USP17L23D6RBM5 183 aa11.66□□□□□ -0.54
SMN1-204ENST00000506163 AMMECR1LQ6DCA0 310 aa11.66□□□□□ -0.54
SMN1-204ENST00000506163 TRAV8-4A0A0B4J246 113 aa11.65□□□□□ -0.54
SMN1-204ENST00000506163 IGKV3OR2-268A0A0C4DH90 116 aa11.65□□□□□ -0.54
SMN1-204ENST00000506163 RPL32P62910 135 aaKnown RBP11.65□□□□□ -0.54
SMN1-204ENST00000506163 LINC01620Q4KN68 170 aa11.65□□□□□ -0.54
SMN1-204ENST00000506163 BTF3L4Q96K17 158 aa11.65□□□□□ -0.54
SMN1-204ENST00000506163 FAM30AQ9NZY2 134 aa11.65□□□□□ -0.54
SMN1-204ENST00000506163 TMEM136Q6ZRR5 245 aa11.64□□□□□ -0.55
SMN1-204ENST00000506163 IMMP2LQ96T52 175 aa11.64□□□□□ -0.55
SMN1-204ENST00000506163 C7orf77A4D0Y5 90 aa11.63□□□□□ -0.55
SMN1-204ENST00000506163 PPBPP02775 128 aa11.63□□□□□ -0.55
SMN1-204ENST00000506163 PRSS1P07477 247 aa11.63□□□□□ -0.55
SMN1-204ENST00000506163 FCER1GP30273 86 aa11.63□□□□□ -0.55
SMN1-204ENST00000506163 MRPL52Q86TS9 123 aaKnown RBP11.63□□□□□ -0.55
SMN1-204ENST00000506163 KIR2DL4Q99706 377 aa11.63□□□□□ -0.55
SMN1-204ENST00000506163 SMIM2Q9BVW6 85 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 176.9 ms