RNA–Protein interactions for RNA: ENST00000505886.5

PDLIM3-206, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4

Gene PDLIM3, Length 571 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-206ENST00000505886 RAB4AP20338 218 aa10.36□□□□□ -0.75
PDLIM3-206ENST00000505886 AMTP48728 403 aa10.36□□□□□ -0.75
PDLIM3-206ENST00000505886 RBX1P62877 108 aa10.36□□□□□ -0.75
PDLIM3-206ENST00000505886 C14orf177Q52M58 125 aa10.36□□□□□ -0.75
PDLIM3-206ENST00000505886 ANAPC16Q96DE5 110 aa10.36□□□□□ -0.75
PDLIM3-206ENST00000505886 ST20Q9HBF5 79 aa10.36□□□□□ -0.75
PDLIM3-206ENST00000505886 PKD1P98161 4303 aa10.36□□□□□ -0.75
PDLIM3-206ENST00000505886 PKHD1P08F94 4074 aa10.35□□□□□ -0.75
PDLIM3-206ENST00000505886 MT-ND4LP03901 98 aa10.35□□□□□ -0.75
PDLIM3-206ENST00000505886 SMAGPQ0VAQ4 97 aa10.35□□□□□ -0.75
PDLIM3-206ENST00000505886 IGKV2D-24A0A075B6R9 120 aa10.34□□□□□ -0.75
PDLIM3-206ENST00000505886 TRAV26-2A0A0B4J265 109 aa10.34□□□□□ -0.75
PDLIM3-206ENST00000505886 TRBV27A0A0K0K1C4 114 aa10.34□□□□□ -0.75
PDLIM3-206ENST00000505886 ZNF25P17030 456 aaPredicted RBP10.34□□□□□ -0.75
PDLIM3-206ENST00000505886 Q8N3U1 123 aa10.34□□□□□ -0.75
PDLIM3-206ENST00000505886 APCSP02743 223 aa10.33□□□□□ -0.76
PDLIM3-206ENST00000505886 PPBPP02775 128 aa10.33□□□□□ -0.76
PDLIM3-206ENST00000505886 HBBP68871 147 aa10.33□□□□□ -0.76
PDLIM3-206ENST00000505886 FAM104BQ5XKR9 115 aa10.33□□□□□ -0.76
PDLIM3-206ENST00000505886 ENHOQ6UWT2 76 aa10.33□□□□□ -0.76
PDLIM3-206ENST00000505886 C20orf78Q9BR46 151 aa10.33□□□□□ -0.76
PDLIM3-206ENST00000505886 IGLV5-52A0A0A0MRZ9 124 aa10.32□□□□□ -0.76
PDLIM3-206ENST00000505886 VCYO14598 125 aa10.32□□□□□ -0.76
PDLIM3-206ENST00000505886 PMCHP20382 165 aa10.32□□□□□ -0.76
PDLIM3-206ENST00000505886 GCSHP23434 173 aa10.32□□□□□ -0.76
PDLIM3-206ENST00000505886 RPL32P62910 135 aaKnown RBP10.32□□□□□ -0.76
PDLIM3-206ENST00000505886 GAGE6Q13070 117 aa10.32□□□□□ -0.76
PDLIM3-206ENST00000505886 AMN1Q8IY45 258 aa10.32□□□□□ -0.76
PDLIM3-206ENST00000505886 RNF185Q96GF1 192 aa10.32□□□□□ -0.76
PDLIM3-206ENST00000505886 TMEM70Q9BUB7 260 aa10.32□□□□□ -0.76
PDLIM3-206ENST00000505886 TRBV24-1A0A075B6N3 115 aa10.31□□□□□ -0.76
PDLIM3-206ENST00000505886 PHOX2AO14813 284 aa10.31□□□□□ -0.76
PDLIM3-206ENST00000505886 POLR2KP53803 58 aaKnown RBP10.31□□□□□ -0.76
PDLIM3-206ENST00000505886 REG3AQ06141 175 aa10.31□□□□□ -0.76
PDLIM3-206ENST00000505886 LINC00269Q8N2A0 174 aa10.31□□□□□ -0.76
PDLIM3-206ENST00000505886 RPL39LQ96EH5 51 aaKnown RBP10.31□□□□□ -0.76
PDLIM3-206ENST00000505886 IMMP2LQ96T52 175 aa10.31□□□□□ -0.76
PDLIM3-206ENST00000505886 AMMECR1LQ6DCA0 310 aa10.3□□□□□ -0.76
PDLIM3-206ENST00000505886 KIR2DL4Q99706 377 aa10.3□□□□□ -0.76
PDLIM3-206ENST00000505886 DNAH11Q96DT5 4516 aa10.3□□□□□ -0.76
PDLIM3-206ENST00000505886 A0A1B0GXF2 115 aa10.29□□□□□ -0.76
PDLIM3-206ENST00000505886 SUMO2P61956 95 aaKnown RBP10.29□□□□□ -0.76
PDLIM3-206ENST00000505886 CKS2P33552 79 aa10.28□□□□□ -0.76
PDLIM3-206ENST00000505886 CAMPP49913 170 aa10.28□□□□□ -0.76
PDLIM3-206ENST00000505886 IFITM2Q01629 132 aa10.28□□□□□ -0.76
PDLIM3-206ENST00000505886 C20orf203Q8NBC4 194 aa10.28□□□□□ -0.76
PDLIM3-206ENST00000505886 CLRN3Q8NCR9 226 aa10.28□□□□□ -0.76
PDLIM3-206ENST00000505886 TMEM18Q96B42 140 aa10.28□□□□□ -0.76
PDLIM3-206ENST00000505886 TMEM101Q96IK0 257 aa10.28□□□□□ -0.76
PDLIM3-206ENST00000505886 BTF3L4Q96K17 158 aa10.28□□□□□ -0.76
PDLIM3-206ENST00000505886 SEC11CQ9BY50 192 aa10.28□□□□□ -0.76
PDLIM3-206ENST00000505886 CTDSP1Q9GZU7 261 aa10.28□□□□□ -0.76
PDLIM3-206ENST00000505886 LAMTOR2Q9Y2Q5 125 aa10.28□□□□□ -0.76
PDLIM3-206ENST00000505886 TMEM218A2RU14 115 aa10.27□□□□□ -0.77
PDLIM3-206ENST00000505886 ESDP10768 282 aa10.27□□□□□ -0.77
PDLIM3-206ENST00000505886 MRPL52Q86TS9 123 aaKnown RBP10.27□□□□□ -0.77
PDLIM3-206ENST00000505886 MAPKAPK5-AS1Q8N8E1 139 aa10.27□□□□□ -0.77
PDLIM3-206ENST00000505886 NRACQ8N912 160 aa10.27□□□□□ -0.77
PDLIM3-206ENST00000505886 CSDC2Q9Y534 153 aaKnown RBP10.27□□□□□ -0.77
PDLIM3-206ENST00000505886 TRAV9-1A0A075B6T8 112 aa10.26□□□□□ -0.77
PDLIM3-206ENST00000505886 FCER1GP30273 86 aa10.26□□□□□ -0.77
PDLIM3-206ENST00000505886 MRPL51Q4U2R6 128 aaKnown RBP10.26□□□□□ -0.77
PDLIM3-206ENST00000505886 DGAT2L7PQ6IED9 249 aa10.26□□□□□ -0.77
PDLIM3-206ENST00000505886 BAALCQ8WXS3 180 aa10.26□□□□□ -0.77
PDLIM3-206ENST00000505886 KRTAP17-1Q9BYP8 105 aa10.26□□□□□ -0.77
PDLIM3-206ENST00000505886 TMEM242Q9NWH2 141 aa10.26□□□□□ -0.77
PDLIM3-206ENST00000505886 C7orf77A4D0Y5 90 aa10.25□□□□□ -0.77
PDLIM3-206ENST00000505886 CCL25O15444 150 aa10.25□□□□□ -0.77
PDLIM3-206ENST00000505886 TSHBP01222 138 aa10.25□□□□□ -0.77
PDLIM3-206ENST00000505886 FGF6P10767 208 aa10.25□□□□□ -0.77
PDLIM3-206ENST00000505886 RPS10P46783 165 aaKnown RBP10.25□□□□□ -0.77
PDLIM3-206ENST00000505886 IGLV4-60A0A075B6I1 120 aa10.24□□□□□ -0.77
PDLIM3-206ENST00000505886 MRPL54Q6P161 138 aaKnown RBP10.24□□□□□ -0.77
PDLIM3-206ENST00000505886 ORMDL3Q8N138 153 aa10.24□□□□□ -0.77
PDLIM3-206ENST00000505886 OR5A1Q8NGJ0 315 aa10.24□□□□□ -0.77
PDLIM3-206ENST00000505886 RNASEKQ6P5S7 137 aaKnown RBP10.23□□□□□ -0.77
PDLIM3-206ENST00000505886 CFAP161Q6P656 301 aa10.23□□□□□ -0.77
PDLIM3-206ENST00000505886 TIMM21Q9BVV7 248 aa10.23□□□□□ -0.77
PDLIM3-206ENST00000505886 KIAA1109Q2LD37 5005 aa10.23□□□□□ -0.77
PDLIM3-206ENST00000505886 HERC2O95714 4834 aa10.23□□□□□ -0.77
PDLIM3-206ENST00000505886 TNFRSF6BO95407 300 aa10.22□□□□□ -0.77
PDLIM3-206ENST00000505886 KRTAP26-1Q6PEX3 210 aa10.22□□□□□ -0.77
PDLIM3-206ENST00000505886 Q8N1X5 172 aa10.22□□□□□ -0.77
PDLIM3-206ENST00000505886 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.21□□□□□ -0.77
PDLIM3-206ENST00000505886 IGKV2-29A2NJV5 120 aaPredicted RBP10.21□□□□□ -0.77
PDLIM3-206ENST00000505886 PRSS47A8MTI9 375 aa10.21□□□□□ -0.77
PDLIM3-206ENST00000505886 USP17L23D6RBM5 183 aa10.21□□□□□ -0.77
PDLIM3-206ENST00000505886 K7EMI3 77 aa10.21□□□□□ -0.77
PDLIM3-206ENST00000505886 GAS8-AS1O95177 125 aa10.21□□□□□ -0.77
PDLIM3-206ENST00000505886 HLA-DQA1P01909 254 aa10.21□□□□□ -0.77
PDLIM3-206ENST00000505886 KRTAP10-1P60331 282 aa10.21□□□□□ -0.77
PDLIM3-206ENST00000505886 WFDC2Q14508 124 aa10.21□□□□□ -0.77
PDLIM3-206ENST00000505886 D6R8Y8 96 aa10.2□□□□□ -0.78
PDLIM3-206ENST00000505886 LECT2O14960 151 aa10.2□□□□□ -0.78
PDLIM3-206ENST00000505886 S100PP25815 95 aa10.2□□□□□ -0.78
PDLIM3-206ENST00000505886 TMEM136Q6ZRR5 245 aa10.2□□□□□ -0.78
PDLIM3-206ENST00000505886 COMMD7Q86VX2 200 aa10.2□□□□□ -0.78
PDLIM3-206ENST00000505886 SMIM2Q9BVW6 85 aa10.2□□□□□ -0.78
PDLIM3-206ENST00000505886 SMKR1H3BMG3 65 aa10.19□□□□□ -0.78
PDLIM3-206ENST00000505886 RHEBQ15382 184 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms