RNA–Protein interactions for RNA: ENST00000505705.1

LIMCH1-206, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 3

Gene LIMCH1, Length 437 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-206ENST00000505705 LOC389332A0A1B0GUA5 103 aa5.63□□□□□ -1.51
LIMCH1-206ENST00000505705 PHOX2AO14813 284 aa5.63□□□□□ -1.51
LIMCH1-206ENST00000505705 SCO1O75880 301 aa5.63□□□□□ -1.51
LIMCH1-206ENST00000505705 NPYP01303 97 aa5.63□□□□□ -1.51
LIMCH1-206ENST00000505705 IGHV3-30P01768 117 aa5.63□□□□□ -1.51
LIMCH1-206ENST00000505705 IGHV3-33P01772 117 aa5.63□□□□□ -1.51
LIMCH1-206ENST00000505705 IGHV3-30-3P0DP02 117 aa5.63□□□□□ -1.51
LIMCH1-206ENST00000505705 IGHV3-30-5P0DP03 117 aa5.63□□□□□ -1.51
LIMCH1-206ENST00000505705 AMTP48728 403 aa5.63□□□□□ -1.51
LIMCH1-206ENST00000505705 NRACQ8N912 160 aa5.63□□□□□ -1.51
LIMCH1-206ENST00000505705 C20orf78Q9BR46 151 aa5.63□□□□□ -1.51
LIMCH1-206ENST00000505705 TMEM70Q9BUB7 260 aa5.63□□□□□ -1.51
LIMCH1-206ENST00000505705 MAP1LC3AQ9H492 121 aa5.63□□□□□ -1.51
LIMCH1-206ENST00000505705 LAMTOR2Q9Y2Q5 125 aa5.63□□□□□ -1.51
LIMCH1-206ENST00000505705 RAB5AP20339 215 aa5.62□□□□□ -1.51
LIMCH1-206ENST00000505705 POLR2KP53803 58 aaKnown RBP5.62□□□□□ -1.51
LIMCH1-206ENST00000505705 PKIAP61925 76 aa5.62□□□□□ -1.51
LIMCH1-206ENST00000505705 XP32Q5T750 250 aa5.62□□□□□ -1.51
LIMCH1-206ENST00000505705 NTM-AS1Q6ZSK4 140 aa5.62□□□□□ -1.51
LIMCH1-206ENST00000505705 TMEM243Q9BU79 118 aa5.62□□□□□ -1.51
LIMCH1-206ENST00000505705 LYSTQ99698 3801 aa5.62□□□□□ -1.51
LIMCH1-206ENST00000505705 TRBV27A0A0K0K1C4 114 aa5.61□□□□□ -1.51
LIMCH1-206ENST00000505705 NBDYA0A0U1RRE5 68 aa5.61□□□□□ -1.51
LIMCH1-206ENST00000505705 TCAPO15273 167 aa5.61□□□□□ -1.51
LIMCH1-206ENST00000505705 GAGE6Q13070 117 aa5.61□□□□□ -1.51
LIMCH1-206ENST00000505705 IQCJQ1A5X6 159 aa5.61□□□□□ -1.51
LIMCH1-206ENST00000505705 TTC32Q5I0X7 151 aa5.61□□□□□ -1.51
LIMCH1-206ENST00000505705 AMMECR1LQ6DCA0 310 aa5.61□□□□□ -1.51
LIMCH1-206ENST00000505705 PRSS3P2Q8NHM4 247 aa5.61□□□□□ -1.51
LIMCH1-206ENST00000505705 SMIM2Q9BVW6 85 aa5.61□□□□□ -1.51
LIMCH1-206ENST00000505705 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.6□□□□□ -1.51
LIMCH1-206ENST00000505705 IGKV2-29A2NJV5 120 aaPredicted RBP5.6□□□□□ -1.51
LIMCH1-206ENST00000505705 LINC01556Q5JQF7 62 aa5.6□□□□□ -1.51
LIMCH1-206ENST00000505705 RNASEKQ6P5S7 137 aaKnown RBP5.6□□□□□ -1.51
LIMCH1-206ENST00000505705 NIT1Q86X76 327 aa5.6□□□□□ -1.51
LIMCH1-206ENST00000505705 C10orf126Q8N4M7 172 aa5.6□□□□□ -1.51
LIMCH1-206ENST00000505705 TMEM18Q96B42 140 aa5.6□□□□□ -1.51
LIMCH1-206ENST00000505705 YPEL4Q96NS1 127 aa5.6□□□□□ -1.51
LIMCH1-206ENST00000505705 ALKBH7Q9BT30 221 aaPredicted RBP5.6□□□□□ -1.51
LIMCH1-206ENST00000505705 HYDINQ4G0P3 5121 aa5.59□□□□□ -1.51
LIMCH1-206ENST00000505705 COLCA2A8K830 154 aa5.59□□□□□ -1.51
LIMCH1-206ENST00000505705 TSHBP01222 138 aa5.59□□□□□ -1.51
LIMCH1-206ENST00000505705 ANGP03950 147 aaKnown RBP5.59□□□□□ -1.51
LIMCH1-206ENST00000505705 DNAH10OSP0CZ25 163 aa5.59□□□□□ -1.51
LIMCH1-206ENST00000505705 IFI27P40305 119 aaPredicted RBP5.59□□□□□ -1.51
LIMCH1-206ENST00000505705 RPL32P62910 135 aaKnown RBP5.59□□□□□ -1.51
LIMCH1-206ENST00000505705 TNP2Q05952 138 aa5.59□□□□□ -1.51
LIMCH1-206ENST00000505705 Q8N8P6 123 aa5.59□□□□□ -1.51
LIMCH1-206ENST00000505705 TMEM101Q96IK0 257 aa5.59□□□□□ -1.51
LIMCH1-206ENST00000505705 CHCHD7Q9BUK0 85 aa5.59□□□□□ -1.51
LIMCH1-206ENST00000505705 NXT2Q9NPJ8 142 aaKnown RBP5.59□□□□□ -1.51
LIMCH1-206ENST00000505705 PRSS47A8MTI9 375 aa5.58□□□□□ -1.52
LIMCH1-206ENST00000505705 H7C423 109 aa5.58□□□□□ -1.52
LIMCH1-206ENST00000505705 K7EP13 123 aa5.58□□□□□ -1.52
LIMCH1-206ENST00000505705 CRPP02741 224 aa5.58□□□□□ -1.52
LIMCH1-206ENST00000505705 TRGC2P03986 189 aa5.58□□□□□ -1.52
LIMCH1-206ENST00000505705 SMAGPQ0VAQ4 97 aa5.58□□□□□ -1.52
LIMCH1-206ENST00000505705 ORMDL2Q53FV1 153 aa5.58□□□□□ -1.52
LIMCH1-206ENST00000505705 MPV17L2Q567V2 206 aa5.58□□□□□ -1.52
LIMCH1-206ENST00000505705 C1orf134Q5TEV5 83 aa5.58□□□□□ -1.52
LIMCH1-206ENST00000505705 DGAT2L7PQ6IED9 249 aa5.58□□□□□ -1.52
LIMCH1-206ENST00000505705 FA2HQ7L5A8 372 aa5.58□□□□□ -1.52
LIMCH1-206ENST00000505705 Q8N976 141 aa5.58□□□□□ -1.52
LIMCH1-206ENST00000505705 KLK12Q9UKR0 248 aa5.58□□□□□ -1.52
LIMCH1-206ENST00000505705 ALMS1Q8TCU4 4167 aa5.57□□□□□ -1.52
LIMCH1-206ENST00000505705 A6NJY4 79 aa5.57□□□□□ -1.52
LIMCH1-206ENST00000505705 FGF6P10767 208 aa5.57□□□□□ -1.52
LIMCH1-206ENST00000505705 BTF3P20290 206 aaKnown RBP5.57□□□□□ -1.52
LIMCH1-206ENST00000505705 RBX1P62877 108 aa5.57□□□□□ -1.52
LIMCH1-206ENST00000505705 LAGE3Q14657 143 aa5.57□□□□□ -1.52
LIMCH1-206ENST00000505705 Q8N3U1 123 aa5.57□□□□□ -1.52
LIMCH1-206ENST00000505705 Q9HAA7 133 aa5.57□□□□□ -1.52
LIMCH1-206ENST00000505705 TENM2Q9NT68 2774 aa5.57□□□□□ -1.52
LIMCH1-206ENST00000505705 IGKV3OR2-268A0A0C4DH90 116 aa5.56□□□□□ -1.52
LIMCH1-206ENST00000505705 A0A1B0GUV1 79 aa5.56□□□□□ -1.52
LIMCH1-206ENST00000505705 IBA57-AS1B1ANH7 110 aa5.56□□□□□ -1.52
LIMCH1-206ENST00000505705 K7EMI3 77 aa5.56□□□□□ -1.52
LIMCH1-206ENST00000505705 ESDP10768 282 aa5.56□□□□□ -1.52
LIMCH1-206ENST00000505705 G0S2P27469 103 aa5.56□□□□□ -1.52
LIMCH1-206ENST00000505705 RAB5BP61020 215 aa5.56□□□□□ -1.52
LIMCH1-206ENST00000505705 NFE4Q86UQ8 179 aa5.56□□□□□ -1.52
LIMCH1-206ENST00000505705 LINC00269Q8N2A0 174 aa5.56□□□□□ -1.52
LIMCH1-206ENST00000505705 C6orf223Q8N319 242 aa5.56□□□□□ -1.52
LIMCH1-206ENST00000505705 OR5A1Q8NGJ0 315 aa5.56□□□□□ -1.52
LIMCH1-206ENST00000505705 UBE2WQ96B02 151 aa5.56□□□□□ -1.52
LIMCH1-206ENST00000505705 IGLV4-60A0A075B6I1 120 aa5.55□□□□□ -1.52
LIMCH1-206ENST00000505705 TRAV8-3A0A0A6YYJ7 113 aa5.55□□□□□ -1.52
LIMCH1-206ENST00000505705 PSCAO43653 123 aa5.55□□□□□ -1.52
LIMCH1-206ENST00000505705 LINC00614P0C842 121 aa5.55□□□□□ -1.52
LIMCH1-206ENST00000505705 ZNF25P17030 456 aaPredicted RBP5.55□□□□□ -1.52
LIMCH1-206ENST00000505705 RPL39P62891 51 aaKnown RBP5.55□□□□□ -1.52
LIMCH1-206ENST00000505705 Q0VG73 95 aa5.55□□□□□ -1.52
LIMCH1-206ENST00000505705 CLPSL2Q6UWE3 100 aa5.55□□□□□ -1.52
LIMCH1-206ENST00000505705 Q6ZR54 194 aa5.55□□□□□ -1.52
LIMCH1-206ENST00000505705 BAGE3Q86Y29 109 aa5.55□□□□□ -1.52
LIMCH1-206ENST00000505705 C20orf203Q8NBC4 194 aa5.55□□□□□ -1.52
LIMCH1-206ENST00000505705 C18orf32Q8TCD1 76 aa5.55□□□□□ -1.52
LIMCH1-206ENST00000505705 RMI2Q96E14 147 aa5.55□□□□□ -1.52
LIMCH1-206ENST00000505705 KRTAP1-5Q9BYS1 174 aa5.55□□□□□ -1.52
LIMCH1-206ENST00000505705 IGKV2D-24A0A075B6R9 120 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms