RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 ASIPP42127 132 aa-0.08□□□□□ -2.42
HMGB1P29-201ENST00000505659 B2MP61769 119 aa-0.08□□□□□ -2.42
HMGB1P29-201ENST00000505659 LZICQ8WZA0 190 aa-0.08□□□□□ -2.42
HMGB1P29-201ENST00000505659 SPRR2FQ96RM1 72 aa-0.08□□□□□ -2.42
HMGB1P29-201ENST00000505659 PSMG3Q9BT73 122 aaPredicted RBP-0.08□□□□□ -2.42
HMGB1P29-201ENST00000505659 DMXL1Q9Y485 3027 aa-0.08□□□□□ -2.42
HMGB1P29-201ENST00000505659 F5P12259 2224 aa-0.08□□□□□ -2.42
HMGB1P29-201ENST00000505659 EYSQ5T1H1 3165 aa-0.08□□□□□ -2.42
HMGB1P29-201ENST00000505659 EP400Q96L91 3159 aa-0.08□□□□□ -2.42
HMGB1P29-201ENST00000505659 SPTBN2O15020 2390 aa-0.08□□□□□ -2.42
HMGB1P29-201ENST00000505659 WNK1Q9H4A3 2382 aa-0.08□□□□□ -2.42
HMGB1P29-201ENST00000505659 APOBP04114 4563 aaKnown RBP-0.08□□□□□ -2.42
HMGB1P29-201ENST00000505659 SACSQ9NZJ4 4579 aa-0.08□□□□□ -2.42
HMGB1P29-201ENST00000505659 PKHD1L1Q86WI1 4243 aa-0.08□□□□□ -2.42
HMGB1P29-201ENST00000505659 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.08□□□□□ -2.42
HMGB1P29-201ENST00000505659 TEP1Q99973 2627 aaKnown RBP-0.08□□□□□ -2.42
HMGB1P29-201ENST00000505659 PRUNE2Q8WUY3 3088 aa-0.08□□□□□ -2.42
HMGB1P29-201ENST00000505659 MYO15AQ9UKN7 3530 aa-0.08□□□□□ -2.42
HMGB1P29-201ENST00000505659 DNAH2Q9P225 4427 aa-0.08□□□□□ -2.42
HMGB1P29-201ENST00000505659 AHCTF1Q8WYP5 2266 aa-0.08□□□□□ -2.42
HMGB1P29-201ENST00000505659 ACANP16112 2415 aa-0.08□□□□□ -2.42
HMGB1P29-201ENST00000505659 ABCA2Q9BZC7 2435 aa-0.08□□□□□ -2.42
HMGB1P29-201ENST00000505659 USP9XQ93008 2570 aaPredicted RBP-0.08□□□□□ -2.42
HMGB1P29-201ENST00000505659 ZNF292O60281 2723 aa-0.08□□□□□ -2.42
HMGB1P29-201ENST00000505659 DNAH5Q8TE73 4624 aa-0.09□□□□□ -2.42
HMGB1P29-201ENST00000505659 MXRA5Q9NR99 2828 aa-0.09□□□□□ -2.42
HMGB1P29-201ENST00000505659 ANKRD11Q6UB99 2663 aaPredicted RBP-0.09□□□□□ -2.42
HMGB1P29-201ENST00000505659 SETXQ7Z333 2677 aaKnown RBP-0.09□□□□□ -2.42
HMGB1P29-201ENST00000505659 DOCK11Q5JSL3 2073 aa-0.09□□□□□ -2.42
HMGB1P29-201ENST00000505659 CASZ1Q86V15 1759 aa-0.09□□□□□ -2.42
HMGB1P29-201ENST00000505659 HECTD4Q9Y4D8 3996 aa-0.09□□□□□ -2.42
HMGB1P29-201ENST00000505659 ATMQ13315 3056 aa-0.09□□□□□ -2.42
HMGB1P29-201ENST00000505659 NBEAQ8NFP9 2946 aa-0.09□□□□□ -2.42
HMGB1P29-201ENST00000505659 TGP01266 2768 aa-0.09□□□□□ -2.42
HMGB1P29-201ENST00000505659 ITPR1Q14643 2758 aa-0.09□□□□□ -2.42
HMGB1P29-201ENST00000505659 MAP1BP46821 2468 aaKnown RBP-0.09□□□□□ -2.42
HMGB1P29-201ENST00000505659 PDE4DIPQ5VU43 2346 aa-0.09□□□□□ -2.42
HMGB1P29-201ENST00000505659 PLXNA1Q9UIW2 1896 aa-0.09□□□□□ -2.42
HMGB1P29-201ENST00000505659 FRYLO94915 3013 aa-0.09□□□□□ -2.42
HMGB1P29-201ENST00000505659 FRYQ5TBA9 3013 aa-0.09□□□□□ -2.42
HMGB1P29-201ENST00000505659 MGAQ8IWI9 3026 aa-0.09□□□□□ -2.42
HMGB1P29-201ENST00000505659 ALMS1Q8TCU4 4167 aa-0.09□□□□□ -2.42
HMGB1P29-201ENST00000505659 EPG5Q9HCE0 2579 aa-0.09□□□□□ -2.42
HMGB1P29-201ENST00000505659 TRAV1-2A0A0B4J238 106 aa-0.09□□□□□ -2.42
HMGB1P29-201ENST00000505659 A0A0D9SFI3 127 aa-0.09□□□□□ -2.42
HMGB1P29-201ENST00000505659 TRBV10-3A0A0K0K1G6 114 aa-0.09□□□□□ -2.42
HMGB1P29-201ENST00000505659 ZNF815PA8K554 130 aa-0.09□□□□□ -2.42
HMGB1P29-201ENST00000505659 APOC4-APOC2K7ER74 178 aa-0.09□□□□□ -2.42
HMGB1P29-201ENST00000505659 SMR3BP02814 79 aaPredicted RBP-0.09□□□□□ -2.42
HMGB1P29-201ENST00000505659 SPINK8P0C7L1 97 aa-0.09□□□□□ -2.42
HMGB1P29-201ENST00000505659 PIRTP0C851 137 aa-0.09□□□□□ -2.42
HMGB1P29-201ENST00000505659 EDDM3BP56851 147 aa-0.09□□□□□ -2.42
HMGB1P29-201ENST00000505659 DEFA5Q01523 94 aa-0.09□□□□□ -2.42
HMGB1P29-201ENST00000505659 HIST1H1AQ02539 215 aaPredicted RBP-0.09□□□□□ -2.42
HMGB1P29-201ENST00000505659 KRTAP6-2Q3LI66 62 aa-0.09□□□□□ -2.42
HMGB1P29-201ENST00000505659 C9orf116Q5BN46 136 aaPredicted RBP-0.09□□□□□ -2.42
HMGB1P29-201ENST00000505659 SCIMPQ6UWF3 145 aa-0.09□□□□□ -2.42
HMGB1P29-201ENST00000505659 AKAP14Q86UN6 197 aa-0.09□□□□□ -2.42
HMGB1P29-201ENST00000505659 CNFNQ9BYD5 112 aa-0.09□□□□□ -2.42
HMGB1P29-201ENST00000505659 CYP4F30PQ9H0H9 118 aa-0.09□□□□□ -2.42
HMGB1P29-201ENST00000505659 CHD7Q9P2D1 2997 aa-0.09□□□□□ -2.42
HMGB1P29-201ENST00000505659 ADGRG4Q8IZF6 3080 aa-0.09□□□□□ -2.42
HMGB1P29-201ENST00000505659 F8P00451 2351 aa-0.09□□□□□ -2.42
HMGB1P29-201ENST00000505659 TEX15Q9BXT5 2789 aa-0.09□□□□□ -2.42
HMGB1P29-201ENST00000505659 HELZP42694 1942 aaKnown RBP-0.09□□□□□ -2.42
HMGB1P29-201ENST00000505659 PRKDCP78527 4128 aaKnown RBP-0.09□□□□□ -2.42
HMGB1P29-201ENST00000505659 CSMD1Q96PZ7 3565 aa-0.09□□□□□ -2.42
HMGB1P29-201ENST00000505659 ANKRD30AQ9BXX3 1397 aa-0.09□□□□□ -2.42
HMGB1P29-201ENST00000505659 IBTKQ9P2D0 1353 aaPredicted RBP-0.09□□□□□ -2.42
HMGB1P29-201ENST00000505659 TMEM2Q9UHN6 1383 aa-0.09□□□□□ -2.42
HMGB1P29-201ENST00000505659 ACACAQ13085 2346 aa-0.09□□□□□ -2.42
HMGB1P29-201ENST00000505659 REV3LO60673 3130 aa-0.09□□□□□ -2.42
HMGB1P29-201ENST00000505659 HTTP42858 3142 aa-0.09□□□□□ -2.42
HMGB1P29-201ENST00000505659 DNAH17Q9UFH2 4485 aa-0.09□□□□□ -2.42
HMGB1P29-201ENST00000505659 USP9YO00507 2555 aaPredicted RBP-0.09□□□□□ -2.42
HMGB1P29-201ENST00000505659 CRYBG3Q68DQ2 2970 aa-0.09□□□□□ -2.42
HMGB1P29-201ENST00000505659 SPTA1P02549 2419 aa-0.09□□□□□ -2.42
HMGB1P29-201ENST00000505659 GVINP1Q7Z2Y8 2422 aa-0.09□□□□□ -2.42
HMGB1P29-201ENST00000505659 GCN1Q92616 2671 aaKnown RBP-0.1□□□□□ -2.42
HMGB1P29-201ENST00000505659 C5orf42Q9H799 3197 aa-0.1□□□□□ -2.42
HMGB1P29-201ENST00000505659 C2CD3Q4AC94 2353 aa-0.1□□□□□ -2.42
HMGB1P29-201ENST00000505659 CMYA5Q8N3K9 4069 aa-0.1□□□□□ -2.42
HMGB1P29-201ENST00000505659 SYNJ1O43426 1573 aa-0.1□□□□□ -2.42
HMGB1P29-201ENST00000505659 FLNBO75369 2602 aaKnown RBP-0.1□□□□□ -2.42
HMGB1P29-201ENST00000505659 ATRQ13535 2644 aa-0.1□□□□□ -2.42
HMGB1P29-201ENST00000505659 USF3Q68DE3 2245 aa-0.1□□□□□ -2.43
HMGB1P29-201ENST00000505659 DNAH14Q0VDD8 3507 aa-0.1□□□□□ -2.43
HMGB1P29-201ENST00000505659 XIRP1Q702N8 1843 aaKnown RBP-0.1□□□□□ -2.43
HMGB1P29-201ENST00000505659 CENPEQ02224 2701 aa-0.1□□□□□ -2.43
HMGB1P29-201ENST00000505659 CSPG4Q6UVK1 2322 aa-0.1□□□□□ -2.43
HMGB1P29-201ENST00000505659 PLCE1Q9P212 2302 aa-0.1□□□□□ -2.43
HMGB1P29-201ENST00000505659 PTPRQQ9UMZ3 2332 aa-0.1□□□□□ -2.43
HMGB1P29-201ENST00000505659 MYO18BQ8IUG5 2567 aa-0.1□□□□□ -2.43
HMGB1P29-201ENST00000505659 CSMD2Q7Z408 3487 aa-0.1□□□□□ -2.43
HMGB1P29-201ENST00000505659 TRIOO75962 3097 aa-0.1□□□□□ -2.43
HMGB1P29-201ENST00000505659 DNAH9Q9NYC9 4486 aa-0.1□□□□□ -2.43
HMGB1P29-201ENST00000505659 FAM236AA0A1B0GUQ0 79 aa-0.1□□□□□ -2.43
HMGB1P29-201ENST00000505659 FAM236BA0A1B0GV22 79 aa-0.1□□□□□ -2.43
HMGB1P29-201ENST00000505659 M0R2Z0 102 aa-0.1□□□□□ -2.43
HMGB1P29-201ENST00000505659 IL5P05113 134 aa-0.1□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms