RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 RPL13AP3Q6NVV1 102 aa0.35□□□□□ -2.35
CHD1-203ENST00000505657 C1orf54Q8WWF1 131 aa0.35□□□□□ -2.35
CHD1-203ENST00000505657 AQP10Q96PS8 301 aa0.35□□□□□ -2.35
CHD1-203ENST00000505657 NAIPQ13075 1403 aa0.35□□□□□ -2.35
CHD1-203ENST00000505657 KDM3BQ7LBC6 1761 aa0.34□□□□□ -2.35
CHD1-203ENST00000505657 SBF2Q86WG5 1849 aa0.34□□□□□ -2.35
CHD1-203ENST00000505657 PIGBOS1A0A0B4J2F0 54 aa0.34□□□□□ -2.36
CHD1-203ENST00000505657 A0A1B0GV90 55 aa0.34□□□□□ -2.36
CHD1-203ENST00000505657 G3V318 75 aa0.34□□□□□ -2.36
CHD1-203ENST00000505657 PPP1R17O96001 155 aa0.34□□□□□ -2.36
CHD1-203ENST00000505657 COX6A2Q02221 97 aa0.34□□□□□ -2.36
CHD1-203ENST00000505657 CATR1Q13166 79 aa0.34□□□□□ -2.36
CHD1-203ENST00000505657 C12orf73Q69YU5 71 aa0.34□□□□□ -2.36
CHD1-203ENST00000505657 BAGE3Q86Y29 109 aa0.34□□□□□ -2.36
CHD1-203ENST00000505657 TTC9CQ8N5M4 171 aa0.34□□□□□ -2.36
CHD1-203ENST00000505657 MRC1P22897 1456 aa0.34□□□□□ -2.36
CHD1-203ENST00000505657 BTAF1O14981 1849 aa0.34□□□□□ -2.36
CHD1-203ENST00000505657 CHD9Q3L8U1 2897 aa0.33□□□□□ -2.36
CHD1-203ENST00000505657 OTOGQ6ZRI0 2925 aa0.33□□□□□ -2.36
CHD1-203ENST00000505657 AKAIN1P0CW23 69 aa0.33□□□□□ -2.36
CHD1-203ENST00000505657 CCL18P55774 89 aa0.33□□□□□ -2.36
CHD1-203ENST00000505657 Q56UQ5 140 aa0.33□□□□□ -2.36
CHD1-203ENST00000505657 CFAP126Q5VTH2 177 aa0.33□□□□□ -2.36
CHD1-203ENST00000505657 PPIP5K1Q6PFW1 1433 aa0.32□□□□□ -2.36
CHD1-203ENST00000505657 SHROOM2Q13796 1616 aa0.32□□□□□ -2.36
CHD1-203ENST00000505657 ANK2Q01484 3957 aa0.32□□□□□ -2.36
CHD1-203ENST00000505657 FGF7P21781 194 aa0.32□□□□□ -2.36
CHD1-203ENST00000505657 UBE2DNLQ8IWF7 75 aa0.32□□□□□ -2.36
CHD1-203ENST00000505657 NPVFQ9HCQ7 196 aa0.32□□□□□ -2.36
CHD1-203ENST00000505657 PXDNQ92626 1479 aa0.32□□□□□ -2.36
CHD1-203ENST00000505657 KIF21AQ7Z4S6 1674 aa0.32□□□□□ -2.36
CHD1-203ENST00000505657 KMT2DO14686 5537 aa0.32□□□□□ -2.36
CHD1-203ENST00000505657 TET3O43151 1660 aa0.31□□□□□ -2.36
CHD1-203ENST00000505657 BCL9LQ86UU0 1499 aa0.31□□□□□ -2.36
CHD1-203ENST00000505657 EFCAB10A6NFE3 127 aa0.31□□□□□ -2.36
CHD1-203ENST00000505657 SNAPC5O75971 98 aa0.31□□□□□ -2.36
CHD1-203ENST00000505657 APOC2P02655 101 aa0.31□□□□□ -2.36
CHD1-203ENST00000505657 BTG2P78543 158 aa0.31□□□□□ -2.36
CHD1-203ENST00000505657 SSBP3-AS1Q7Z2R9 100 aa0.31□□□□□ -2.36
CHD1-203ENST00000505657 TSLPQ969D9 159 aa0.31□□□□□ -2.36
CHD1-203ENST00000505657 CPSF1Q10570 1443 aaKnown RBP0.3□□□□□ -2.36
CHD1-203ENST00000505657 ZNF292O60281 2723 aa0.3□□□□□ -2.36
CHD1-203ENST00000505657 CTXND1A0A1B0GTU2 59 aa0.3□□□□□ -2.36
CHD1-203ENST00000505657 ZNF815PA8K554 130 aa0.3□□□□□ -2.36
CHD1-203ENST00000505657 M0R135 149 aa0.3□□□□□ -2.36
CHD1-203ENST00000505657 DLEU1O43261 78 aa0.3□□□□□ -2.36
CHD1-203ENST00000505657 SPAG11BQ08648 103 aa0.3□□□□□ -2.36
CHD1-203ENST00000505657 SPAG11AQ6PDA7 123 aa0.3□□□□□ -2.36
CHD1-203ENST00000505657 PP6455Q8WZ26 134 aa0.3□□□□□ -2.36
CHD1-203ENST00000505657 PPP3R2Q96LZ3 170 aa0.3□□□□□ -2.36
CHD1-203ENST00000505657 SCN3BQ9NY72 215 aa0.3□□□□□ -2.36
CHD1-203ENST00000505657 R4GMQ9 66 aa0.3□□□□□ -2.36
CHD1-203ENST00000505657 FAM208BQ5VWN6 2430 aa0.3□□□□□ -2.36
CHD1-203ENST00000505657 EIF4G3O43432 1585 aaKnown RBP0.29□□□□□ -2.36
CHD1-203ENST00000505657 OOSP1A8MZH6 123 aa0.29□□□□□ -2.36
CHD1-203ENST00000505657 MRPL54Q6P161 138 aaKnown RBP0.29□□□□□ -2.36
CHD1-203ENST00000505657 LENEPQ9Y5L5 61 aa0.29□□□□□ -2.36
CHD1-203ENST00000505657 V9GYH0 126 aa0.29□□□□□ -2.36
CHD1-203ENST00000505657 KTN1Q86UP2 1357 aaKnown RBP0.29□□□□□ -2.36
CHD1-203ENST00000505657 A2ML1A8K2U0 1454 aa0.29□□□□□ -2.36
CHD1-203ENST00000505657 IFNGP01579 166 aa0.28□□□□□ -2.36
CHD1-203ENST00000505657 C9orf153Q5TBE3 101 aa0.28□□□□□ -2.36
CHD1-203ENST00000505657 Q5VV11 94 aa0.28□□□□□ -2.36
CHD1-203ENST00000505657 MYOM2P54296 1465 aa0.28□□□□□ -2.37
CHD1-203ENST00000505657 KDM5AP29375 1690 aaKnown RBP0.27□□□□□ -2.37
CHD1-203ENST00000505657 LRRC37A2A6NM11 1700 aa0.27□□□□□ -2.37
CHD1-203ENST00000505657 C8orf59Q8N0T1 100 aaPredicted RBP0.27□□□□□ -2.37
CHD1-203ENST00000505657 FAM213BQ8TBF2 198 aa0.27□□□□□ -2.37
CHD1-203ENST00000505657 SPANXDQ9BXN6 97 aa0.27□□□□□ -2.37
CHD1-203ENST00000505657 ZNF609O15014 1411 aa0.27□□□□□ -2.37
CHD1-203ENST00000505657 NCOR2Q9Y618 2525 aa0.27□□□□□ -2.37
CHD1-203ENST00000505657 IGSF10Q6WRI0 2623 aa0.27□□□□□ -2.37
CHD1-203ENST00000505657 FAT4Q6V0I7 4981 aa0.26□□□□□ -2.37
CHD1-203ENST00000505657 SPTBN2O15020 2390 aa0.26□□□□□ -2.37
CHD1-203ENST00000505657 C2CD3Q4AC94 2353 aa0.26□□□□□ -2.37
CHD1-203ENST00000505657 TPPP2P59282 170 aa0.26□□□□□ -2.37
CHD1-203ENST00000505657 HAMPP81172 84 aa0.26□□□□□ -2.37
CHD1-203ENST00000505657 Q5BKY6 102 aa0.26□□□□□ -2.37
CHD1-203ENST00000505657 C5orf38Q86SI9 138 aa0.26□□□□□ -2.37
CHD1-203ENST00000505657 NDUFA4L2Q9NRX3 87 aa0.26□□□□□ -2.37
CHD1-203ENST00000505657 LINC00474Q9P2X8 69 aa0.26□□□□□ -2.37
CHD1-203ENST00000505657 RIMS1Q86UR5 1692 aaKnown RBP0.26□□□□□ -2.37
CHD1-203ENST00000505657 MYO7BQ6PIF6 2116 aa0.26□□□□□ -2.37
CHD1-203ENST00000505657 UNC79Q9P2D8 2635 aa0.26□□□□□ -2.37
CHD1-203ENST00000505657 UBR5O95071 2799 aaPredicted RBP0.26□□□□□ -2.37
CHD1-203ENST00000505657 LRP6O75581 1613 aa0.25□□□□□ -2.37
CHD1-203ENST00000505657 TRBV7-3A0A075B6L6 115 aa0.25□□□□□ -2.37
CHD1-203ENST00000505657 LINC00587B1AMM8 73 aa0.25□□□□□ -2.37
CHD1-203ENST00000505657 F6UZH7 168 aa0.25□□□□□ -2.37
CHD1-203ENST00000505657 PIN1P1O15428 100 aa0.25□□□□□ -2.37
CHD1-203ENST00000505657 SPINK1P00995 79 aa0.25□□□□□ -2.37
CHD1-203ENST00000505657 S100A1P23297 94 aa0.25□□□□□ -2.37
CHD1-203ENST00000505657 COMMD6Q7Z4G1 85 aa0.25□□□□□ -2.37
CHD1-203ENST00000505657 SMIM4Q8WVI0 70 aa0.25□□□□□ -2.37
CHD1-203ENST00000505657 MGST2Q99735 147 aa0.25□□□□□ -2.37
CHD1-203ENST00000505657 CYP4F30PQ9H0H9 118 aa0.25□□□□□ -2.37
CHD1-203ENST00000505657 DYNLRB1Q9NP97 96 aa0.25□□□□□ -2.37
CHD1-203ENST00000505657 DOPEY2Q9Y3R5 2298 aa0.25□□□□□ -2.37
CHD1-203ENST00000505657 CELSR1Q9NYQ6 3014 aa0.24□□□□□ -2.37
CHD1-203ENST00000505657 CC2D2AQ9P2K1 1620 aa0.24□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms