RNA–Protein interactions for RNA: ENST00000505522.4

SNHG4-202, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 629 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-202ENST00000505522 DPH3P1Q9H4G8 78 aa7.79□□□□□ -1.16
SNHG4-202ENST00000505522 XKRY2A2RUG3 117 aa7.78□□□□□ -1.16
SNHG4-202ENST00000505522 SULT1A2P50226 295 aa7.78□□□□□ -1.16
SNHG4-202ENST00000505522 MED9Q9NWA0 146 aa7.78□□□□□ -1.16
SNHG4-202ENST00000505522 TEX46H3BTG2 121 aa7.77□□□□□ -1.17
SNHG4-202ENST00000505522 UBE2L6O14933 153 aa7.77□□□□□ -1.17
SNHG4-202ENST00000505522 PDE6DO43924 150 aa7.77□□□□□ -1.17
SNHG4-202ENST00000505522 CHTF8P0CG12 524 aa7.77□□□□□ -1.17
SNHG4-202ENST00000505522 CTRLP40313 264 aa7.77□□□□□ -1.17
SNHG4-202ENST00000505522 C9orf62Q8N4C0 152 aa7.77□□□□□ -1.17
SNHG4-202ENST00000505522 NUDT10Q8NFP7 164 aa7.77□□□□□ -1.17
SNHG4-202ENST00000505522 NUDT11Q96G61 164 aa7.77□□□□□ -1.17
SNHG4-202ENST00000505522 AP5S1Q9NUS5 200 aa7.77□□□□□ -1.17
SNHG4-202ENST00000505522 PLA2G2DQ9UNK4 145 aa7.77□□□□□ -1.17
SNHG4-202ENST00000505522 IGHV3-64A0A075B6Q5 118 aa7.76□□□□□ -1.17
SNHG4-202ENST00000505522 MT1HL1P0DM35 61 aa7.76□□□□□ -1.17
SNHG4-202ENST00000505522 BCL2P10415 239 aa7.76□□□□□ -1.17
SNHG4-202ENST00000505522 AMTP48728 403 aa7.76□□□□□ -1.17
SNHG4-202ENST00000505522 COTL1Q14019 142 aa7.76□□□□□ -1.17
SNHG4-202ENST00000505522 WDR73Q6P4I2 378 aa7.76□□□□□ -1.17
SNHG4-202ENST00000505522 A0A087WYN8 130 aa7.75□□□□□ -1.17
SNHG4-202ENST00000505522 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.75□□□□□ -1.17
SNHG4-202ENST00000505522 TRAV26-2A0A0B4J265 109 aa7.75□□□□□ -1.17
SNHG4-202ENST00000505522 TWIST1Q15672 202 aa7.75□□□□□ -1.17
SNHG4-202ENST00000505522 EIF5AL1Q6IS14 154 aaKnown RBP7.75□□□□□ -1.17
SNHG4-202ENST00000505522 C15orf56Q8N910 161 aa7.75□□□□□ -1.17
SNHG4-202ENST00000505522 GATD1Q8NB37 220 aa7.75□□□□□ -1.17
SNHG4-202ENST00000505522 SPACA4Q8TDM5 124 aa7.75□□□□□ -1.17
SNHG4-202ENST00000505522 DPH3Q96FX2 82 aa7.75□□□□□ -1.17
SNHG4-202ENST00000505522 CNFNQ9BYD5 112 aa7.75□□□□□ -1.17
SNHG4-202ENST00000505522 BIN3Q9NQY0 253 aa7.75□□□□□ -1.17
SNHG4-202ENST00000505522 IGKV3OR2-268A0A0C4DH90 116 aa7.74□□□□□ -1.17
SNHG4-202ENST00000505522 GAGE12HA6NDE8 117 aa7.74□□□□□ -1.17
SNHG4-202ENST00000505522 K7EN84 100 aa7.74□□□□□ -1.17
SNHG4-202ENST00000505522 Q6ZNX1 250 aa7.74□□□□□ -1.17
SNHG4-202ENST00000505522 Q6ZRU5 148 aa7.74□□□□□ -1.17
SNHG4-202ENST00000505522 RNF185Q96GF1 192 aa7.74□□□□□ -1.17
SNHG4-202ENST00000505522 RNASE7Q9H1E1 156 aaKnown RBP7.74□□□□□ -1.17
SNHG4-202ENST00000505522 RPP21Q9H633 154 aaKnown RBP7.74□□□□□ -1.17
SNHG4-202ENST00000505522 FOXA3P55318 350 aaPredicted RBP7.73□□□□□ -1.17
SNHG4-202ENST00000505522 OCC1Q8TAD7 63 aa7.73□□□□□ -1.17
SNHG4-202ENST00000505522 GTSF1Q8WW33 167 aa7.73□□□□□ -1.17
SNHG4-202ENST00000505522 RPL39LQ96EH5 51 aaKnown RBP7.73□□□□□ -1.17
SNHG4-202ENST00000505522 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.72□□□□□ -1.17
SNHG4-202ENST00000505522 IGKV2-29A2NJV5 120 aaPredicted RBP7.72□□□□□ -1.17
SNHG4-202ENST00000505522 HIGD2BQ4VC39 106 aa7.72□□□□□ -1.17
SNHG4-202ENST00000505522 CHCHD10Q8WYQ3 142 aaPredicted RBP7.72□□□□□ -1.17
SNHG4-202ENST00000505522 PLAC8Q9NZF1 115 aa7.72□□□□□ -1.17
SNHG4-202ENST00000505522 UBR4Q5T4S7 5183 aa7.71□□□□□ -1.17
SNHG4-202ENST00000505522 PHOX2AO14813 284 aa7.71□□□□□ -1.18
SNHG4-202ENST00000505522 RPS10P46783 165 aaKnown RBP7.71□□□□□ -1.18
SNHG4-202ENST00000505522 COX6A2Q02221 97 aa7.71□□□□□ -1.18
SNHG4-202ENST00000505522 CFAP161Q6P656 301 aa7.71□□□□□ -1.18
SNHG4-202ENST00000505522 PRSS3P2Q8NHM4 247 aa7.71□□□□□ -1.18
SNHG4-202ENST00000505522 NCR2O95944 276 aa7.7□□□□□ -1.18
SNHG4-202ENST00000505522 TAGLN2P37802 199 aaKnown RBP7.7□□□□□ -1.18
SNHG4-202ENST00000505522 AMMECR1LQ6DCA0 310 aa7.7□□□□□ -1.18
SNHG4-202ENST00000505522 RNASEKQ6P5S7 137 aaKnown RBP7.7□□□□□ -1.18
SNHG4-202ENST00000505522 SLC51BQ86UW2 128 aa7.7□□□□□ -1.18
SNHG4-202ENST00000505522 TCTE3Q8IZS6 198 aa7.7□□□□□ -1.18
SNHG4-202ENST00000505522 SDHAF1A6NFY7 115 aa7.69□□□□□ -1.18
SNHG4-202ENST00000505522 NDUFS6O75380 124 aaKnown RBP7.69□□□□□ -1.18
SNHG4-202ENST00000505522 APCSP02743 223 aa7.69□□□□□ -1.18
SNHG4-202ENST00000505522 FGF6P10767 208 aa7.69□□□□□ -1.18
SNHG4-202ENST00000505522 SMIM15Q7Z3B0 74 aa7.69□□□□□ -1.18
SNHG4-202ENST00000505522 GVQW2A0A096LPI5 108 aaPredicted RBP7.68□□□□□ -1.18
SNHG4-202ENST00000505522 IGKV2-24A0A0C4DH68 120 aa7.68□□□□□ -1.18
SNHG4-202ENST00000505522 FAM231BA6NCW3 169 aa7.68□□□□□ -1.18
SNHG4-202ENST00000505522 H7C423 109 aa7.68□□□□□ -1.18
SNHG4-202ENST00000505522 GAS8-AS1O95177 125 aa7.68□□□□□ -1.18
SNHG4-202ENST00000505522 FOXI1Q12951 378 aa7.68□□□□□ -1.18
SNHG4-202ENST00000505522 MAJINQ3KP22 176 aa7.68□□□□□ -1.18
SNHG4-202ENST00000505522 GATCO43716 136 aaKnown RBP7.67□□□□□ -1.18
SNHG4-202ENST00000505522 TEX261Q6UWH6 196 aa7.67□□□□□ -1.18
SNHG4-202ENST00000505522 C7orf33Q8WU49 177 aa7.67□□□□□ -1.18
SNHG4-202ENST00000505522 TNXBP22105 4242 aa7.66□□□□□ -1.18
SNHG4-202ENST00000505522 A0A096LNI7 61 aa7.66□□□□□ -1.18
SNHG4-202ENST00000505522 I3L3M4 83 aa7.66□□□□□ -1.18
SNHG4-202ENST00000505522 ZNF25P17030 456 aaPredicted RBP7.66□□□□□ -1.18
SNHG4-202ENST00000505522 PMCHP20382 165 aa7.66□□□□□ -1.18
SNHG4-202ENST00000505522 FAM231DQ6ZW35 169 aa7.66□□□□□ -1.18
SNHG4-202ENST00000505522 STPG4Q8N801 248 aa7.66□□□□□ -1.18
SNHG4-202ENST00000505522 OR5A1Q8NGJ0 315 aa7.66□□□□□ -1.18
SNHG4-202ENST00000505522 LYPD6BQ8NI32 183 aa7.66□□□□□ -1.18
SNHG4-202ENST00000505522 LINC00526Q96FQ7 95 aa7.66□□□□□ -1.18
SNHG4-202ENST00000505522 TRBV6-5A0A0K0K1A5 114 aa7.65□□□□□ -1.18
SNHG4-202ENST00000505522 LINC00959A0A1B0GUT2 108 aa7.65□□□□□ -1.18
SNHG4-202ENST00000505522 A8MWL6 223 aa7.65□□□□□ -1.18
SNHG4-202ENST00000505522 TMEM250H0YL14 139 aa7.65□□□□□ -1.18
SNHG4-202ENST00000505522 CCL25O15444 150 aa7.65□□□□□ -1.18
SNHG4-202ENST00000505522 TSHBP01222 138 aa7.65□□□□□ -1.18
SNHG4-202ENST00000505522 ESDP10768 282 aa7.65□□□□□ -1.18
SNHG4-202ENST00000505522 XCL1P47992 114 aa7.65□□□□□ -1.18
SNHG4-202ENST00000505522 CEBPGP53567 150 aa7.64□□□□□ -1.19
SNHG4-202ENST00000505522 PRR3P79522 188 aaKnown RBP7.64□□□□□ -1.19
SNHG4-202ENST00000505522 BTF3L4Q96K17 158 aa7.64□□□□□ -1.19
SNHG4-202ENST00000505522 ST20Q9HBF5 79 aa7.64□□□□□ -1.19
SNHG4-202ENST00000505522 TMEM242Q9NWH2 141 aa7.64□□□□□ -1.19
SNHG4-202ENST00000505522 CT83Q5H943 113 aa7.63□□□□□ -1.19
SNHG4-202ENST00000505522 ALKAL2Q6UX46 152 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms