RNA–Protein interactions for RNA: ENST00000505066.5

DDR1-256, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 4

Gene DDR1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-256	ENST00000505066	BCL2	P10415	239 aa		10.58	□□□□□ -0.72
DDR1-256	ENST00000505066	BORCS7	Q96B45	105 aa		10.58	□□□□□ -0.72
DDR1-256	ENST00000505066	CNBP	P62633	177 aa	Known RBP	10.57	□□□□□ -0.72
DDR1-256	ENST00000505066	C9orf62	Q8N4C0	152 aa		10.57	□□□□□ -0.72
DDR1-256	ENST00000505066	RNF185	Q96GF1	192 aa		10.57	□□□□□ -0.72
DDR1-256	ENST00000505066	PKIG	Q9Y2B9	76 aa		10.57	□□□□□ -0.72
DDR1-256	ENST00000505066	MYCBP2	O75592	4640 aa		10.57	□□□□□ -0.72
DDR1-256	ENST00000505066	IGKV3OR2-268	A0A0C4DH90	116 aa		10.56	□□□□□ -0.72
DDR1-256	ENST00000505066	C7orf33	Q8WU49	177 aa		10.56	□□□□□ -0.72
DDR1-256	ENST00000505066	BTF3L4	Q96K17	158 aa		10.56	□□□□□ -0.72
DDR1-256	ENST00000505066	RPP21	Q9H633	154 aa	Known RBP	10.56	□□□□□ -0.72
DDR1-256	ENST00000505066	RNASEK	Q6P5S7	137 aa	Known RBP	10.55	□□□□□ -0.72
DDR1-256	ENST00000505066	SDIM1	Q6ZPB5	146 aa		10.55	□□□□□ -0.72
DDR1-256	ENST00000505066	SLC51B	Q86UW2	128 aa		10.55	□□□□□ -0.72
DDR1-256	ENST00000505066	C20orf203	Q8NBC4	194 aa		10.55	□□□□□ -0.72
DDR1-256	ENST00000505066	NUDT10	Q8NFP7	164 aa		10.55	□□□□□ -0.72
DDR1-256	ENST00000505066	NUDT11	Q96G61	164 aa		10.55	□□□□□ -0.72
DDR1-256	ENST00000505066	TMEM101	Q96IK0	257 aa		10.55	□□□□□ -0.72
DDR1-256	ENST00000505066	PLA2G2D	Q9UNK4	145 aa		10.55	□□□□□ -0.72
DDR1-256	ENST00000505066	NCR2	O95944	276 aa		10.54	□□□□□ -0.72
DDR1-256	ENST00000505066	IGLV4-60	A0A075B6I1	120 aa		10.53	□□□□□ -0.72
DDR1-256	ENST00000505066	GAGE12H	A6NDE8	117 aa		10.53	□□□□□ -0.72
DDR1-256	ENST00000505066		H7C423	109 aa		10.53	□□□□□ -0.72
DDR1-256	ENST00000505066	APCS	P02743	223 aa		10.53	□□□□□ -0.72
DDR1-256	ENST00000505066	CTRL	P40313	264 aa		10.53	□□□□□ -0.72
DDR1-256	ENST00000505066	KRTAP26-1	Q6PEX3	210 aa		10.52	□□□□□ -0.73
DDR1-256	ENST00000505066	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	10.52	□□□□□ -0.73
DDR1-256	ENST00000505066		A8MWL6	223 aa		10.51	□□□□□ -0.73
DDR1-256	ENST00000505066	GATC	O43716	136 aa	Known RBP	10.51	□□□□□ -0.73
DDR1-256	ENST00000505066	PMCH	P20382	165 aa		10.51	□□□□□ -0.73
DDR1-256	ENST00000505066	RPS10	P46783	165 aa	Known RBP	10.51	□□□□□ -0.73
DDR1-256	ENST00000505066	BLOC1S1	P78537	153 aa		10.5	□□□□□ -0.73
DDR1-256	ENST00000505066		Q6ZRU5	148 aa		10.5	□□□□□ -0.73
DDR1-256	ENST00000505066	FAM210A	Q96ND0	272 aa		10.5	□□□□□ -0.73
DDR1-256	ENST00000505066	RNASE7	Q9H1E1	156 aa	Known RBP	10.5	□□□□□ -0.73
DDR1-256	ENST00000505066	ZNF25	P17030	456 aa	Predicted RBP	10.49	□□□□□ -0.73
DDR1-256	ENST00000505066	CEBPG	P53567	150 aa		10.49	□□□□□ -0.73
DDR1-256	ENST00000505066	KRTAP10-4	P60372	401 aa	Predicted RBP	10.49	□□□□□ -0.73
DDR1-256	ENST00000505066	SMAGP	Q0VAQ4	97 aa		10.49	□□□□□ -0.73
DDR1-256	ENST00000505066	TCTE3	Q8IZS6	198 aa		10.49	□□□□□ -0.73
DDR1-256	ENST00000505066	GATD1	Q8NB37	220 aa		10.49	□□□□□ -0.73
DDR1-256	ENST00000505066	CNFN	Q9BYD5	112 aa		10.49	□□□□□ -0.73
DDR1-256	ENST00000505066	TRBV20OR9-2	A0A075B6H5	130 aa		10.48	□□□□□ -0.73
DDR1-256	ENST00000505066	TRAV26-2	A0A0B4J265	109 aa		10.48	□□□□□ -0.73
DDR1-256	ENST00000505066		I3L3M4	83 aa		10.48	□□□□□ -0.73
DDR1-256	ENST00000505066	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	10.48	□□□□□ -0.73
DDR1-256	ENST00000505066	LINC00474	Q9P2X8	69 aa		10.48	□□□□□ -0.73
DDR1-256	ENST00000505066		A0A087WYN8	130 aa		10.47	□□□□□ -0.73
DDR1-256	ENST00000505066	SDHAF1	A6NFY7	115 aa		10.47	□□□□□ -0.73
DDR1-256	ENST00000505066	TMEM250	H0YL14	139 aa		10.47	□□□□□ -0.73
DDR1-256	ENST00000505066	NDUFS6	O75380	124 aa	Known RBP	10.47	□□□□□ -0.73
DDR1-256	ENST00000505066	OR5A1	Q8NGJ0	315 aa		10.47	□□□□□ -0.73
DDR1-256	ENST00000505066	OCC1	Q8TAD7	63 aa		10.47	□□□□□ -0.73
DDR1-256	ENST00000505066	GTSF1	Q8WW33	167 aa		10.47	□□□□□ -0.73
DDR1-256	ENST00000505066	GFRA4	Q9GZZ7	299 aa		10.47	□□□□□ -0.73
DDR1-256	ENST00000505066	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	10.46	□□□□□ -0.73
DDR1-256	ENST00000505066	IGKV2-29	A2NJV5	120 aa	Predicted RBP	10.46	□□□□□ -0.73
DDR1-256	ENST00000505066	FGF6	P10767	208 aa		10.46	□□□□□ -0.73
DDR1-256	ENST00000505066	CIRBP	Q14011	172 aa	Known RBP	10.46	□□□□□ -0.73
DDR1-256	ENST00000505066	SS18	Q15532	418 aa		10.46	□□□□□ -0.73
DDR1-256	ENST00000505066	MAJIN	Q3KP22	176 aa		10.46	□□□□□ -0.73
DDR1-256	ENST00000505066	HIGD2B	Q4VC39	106 aa		10.46	□□□□□ -0.73
DDR1-256	ENST00000505066	MRAP2	Q96G30	205 aa		10.46	□□□□□ -0.73
DDR1-256	ENST00000505066	ST20	Q9HBF5	79 aa		10.46	□□□□□ -0.73
DDR1-256	ENST00000505066	COX6A2	Q02221	97 aa		10.45	□□□□□ -0.74
DDR1-256	ENST00000505066	SPACA4	Q8TDM5	124 aa		10.45	□□□□□ -0.74
DDR1-256	ENST00000505066	RPL39L	Q96EH5	51 aa	Known RBP	10.45	□□□□□ -0.74
DDR1-256	ENST00000505066	IGKV2-24	A0A0C4DH68	120 aa		10.44	□□□□□ -0.74
DDR1-256	ENST00000505066	EIF5A2	Q9GZV4	153 aa	Known RBP	10.44	□□□□□ -0.74
DDR1-256	ENST00000505066	DNAH8	Q96JB1	4490 aa		10.44	□□□□□ -0.74
DDR1-256	ENST00000505066	PANO1	I0J062	215 aa		10.43	□□□□□ -0.74
DDR1-256	ENST00000505066	ZNF561-AS1	K7EIQ3	104 aa		10.43	□□□□□ -0.74
DDR1-256	ENST00000505066		K7EN84	100 aa		10.43	□□□□□ -0.74
DDR1-256	ENST00000505066	PPP1R17	O96001	155 aa		10.43	□□□□□ -0.74
DDR1-256	ENST00000505066	CHTF8	P0CG12	524 aa		10.43	□□□□□ -0.74
DDR1-256	ENST00000505066	FCER1G	P30273	86 aa		10.43	□□□□□ -0.74
DDR1-256	ENST00000505066	XCL1	P47992	114 aa		10.43	□□□□□ -0.74
DDR1-256	ENST00000505066	CT83	Q5H943	113 aa		10.43	□□□□□ -0.74
DDR1-256	ENST00000505066		Q6ZNX1	250 aa		10.43	□□□□□ -0.74
DDR1-256	ENST00000505066	FAM231D	Q6ZW35	169 aa		10.43	□□□□□ -0.74
DDR1-256	ENST00000505066	PLAC8	Q9NZF1	115 aa		10.43	□□□□□ -0.74
DDR1-256	ENST00000505066	IGHV1-58	A0A0C4DH39	117 aa		10.42	□□□□□ -0.74
DDR1-256	ENST00000505066		A0A1B0GUT8	65 aa		10.42	□□□□□ -0.74
DDR1-256	ENST00000505066	AKAP14	Q86UN6	197 aa		10.42	□□□□□ -0.74
DDR1-256	ENST00000505066	C15orf56	Q8N910	161 aa		10.42	□□□□□ -0.74
DDR1-256	ENST00000505066	ISOC2	Q96AB3	205 aa		10.42	□□□□□ -0.74
DDR1-256	ENST00000505066	GVQW2	A0A096LPI5	108 aa	Predicted RBP	10.41	□□□□□ -0.74
DDR1-256	ENST00000505066	MAL	P21145	153 aa		10.41	□□□□□ -0.74
DDR1-256	ENST00000505066	STPG4	Q8N801	248 aa		10.41	□□□□□ -0.74
DDR1-256	ENST00000505066	SMIM7	Q9BQ49	75 aa		10.41	□□□□□ -0.74
DDR1-256	ENST00000505066	TRBV6-5	A0A0K0K1A5	114 aa		10.4	□□□□□ -0.74
DDR1-256	ENST00000505066	CCL25	O15444	150 aa		10.4	□□□□□ -0.74
DDR1-256	ENST00000505066	PHOX2A	O14813	284 aa		10.39	□□□□□ -0.75
DDR1-256	ENST00000505066	SLPI	P03973	132 aa		10.39	□□□□□ -0.75
DDR1-256	ENST00000505066	HNRNPA3	P51991	378 aa	Known RBP	10.39	□□□□□ -0.75
DDR1-256	ENST00000505066	RIG	Q13278	110 aa		10.39	□□□□□ -0.75
DDR1-256	ENST00000505066	ALKAL2	Q6UX46	152 aa		10.39	□□□□□ -0.75
DDR1-256	ENST00000505066	LYPD6B	Q8NI32	183 aa		10.39	□□□□□ -0.75
DDR1-256	ENST00000505066	TSKU	Q8WUA8	353 aa		10.39	□□□□□ -0.75
DDR1-256	ENST00000505066	TMEM18	Q96B42	140 aa		10.39	□□□□□ -0.75

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