RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 MLST8Q9BVC4 326 aa3.71□□□□□ -1.82
GYPB-204ENST00000504951 ZNF471Q9BX82 626 aaPredicted RBP3.71□□□□□ -1.82
GYPB-204ENST00000504951 NKX6-2Q9C056 277 aaPredicted RBP3.71□□□□□ -1.82
GYPB-204ENST00000504951 MED28Q9H204 178 aa3.71□□□□□ -1.82
GYPB-204ENST00000504951 CRCT1Q9UGL9 99 aa3.71□□□□□ -1.82
GYPB-204ENST00000504951 IGLV4-60A0A075B6I1 120 aa3.7□□□□□ -1.82
GYPB-204ENST00000504951 BORCS7-ASMTA0A0B4J1R7 106 aa3.7□□□□□ -1.82
GYPB-204ENST00000504951 A0A1B0GV50 99 aa3.7□□□□□ -1.82
GYPB-204ENST00000504951 F5H697 171 aa3.7□□□□□ -1.82
GYPB-204ENST00000504951 SNAI2O43623 268 aa3.7□□□□□ -1.82
GYPB-204ENST00000504951 PAGE4O60829 102 aa3.7□□□□□ -1.82
GYPB-204ENST00000504951 GIPP09681 153 aaPredicted RBP3.7□□□□□ -1.82
GYPB-204ENST00000504951 AKR1C3P42330 323 aa3.7□□□□□ -1.82
GYPB-204ENST00000504951 RAB5CP51148 216 aa3.7□□□□□ -1.82
GYPB-204ENST00000504951 REG3AQ06141 175 aa3.7□□□□□ -1.82
GYPB-204ENST00000504951 TMEM97Q5BJF2 176 aa3.7□□□□□ -1.82
GYPB-204ENST00000504951 AKR1C8PQ5T2L2 129 aa3.7□□□□□ -1.82
GYPB-204ENST00000504951 Q6ZRP5 223 aa3.7□□□□□ -1.82
GYPB-204ENST00000504951 INO80EQ8NBZ0 244 aaPredicted RBP3.7□□□□□ -1.82
GYPB-204ENST00000504951 LINC00474Q9P2X8 69 aa3.7□□□□□ -1.82
GYPB-204ENST00000504951 TRBV25-1A0A075B6N4 114 aa3.69□□□□□ -1.82
GYPB-204ENST00000504951 hDV102S1A0JD36 115 aa3.69□□□□□ -1.82
GYPB-204ENST00000504951 H7C1H1 209 aa3.69□□□□□ -1.82
GYPB-204ENST00000504951 M0QY20 66 aa3.69□□□□□ -1.82
GYPB-204ENST00000504951 NDUFS6O75380 124 aaKnown RBP3.69□□□□□ -1.82
GYPB-204ENST00000504951 OR5AL1P0C617 328 aa3.69□□□□□ -1.82
GYPB-204ENST00000504951 IQCJQ1A5X6 159 aa3.69□□□□□ -1.82
GYPB-204ENST00000504951 SPANXN1Q5VSR9 72 aa3.69□□□□□ -1.82
GYPB-204ENST00000504951 STOML3Q8TAV4 291 aa3.69□□□□□ -1.82
GYPB-204ENST00000504951 GTSF1Q8WW33 167 aa3.69□□□□□ -1.82
GYPB-204ENST00000504951 PKIGQ9Y2B9 76 aa3.69□□□□□ -1.82
GYPB-204ENST00000504951 A0A1B0GUV1 79 aa3.68□□□□□ -1.82
GYPB-204ENST00000504951 SMLR1H3BR10 107 aa3.68□□□□□ -1.82
GYPB-204ENST00000504951 ARPC5O15511 151 aa3.68□□□□□ -1.82
GYPB-204ENST00000504951 CXCL1P09341 107 aa3.68□□□□□ -1.82
GYPB-204ENST00000504951 IGLC6P0CF74 106 aa3.68□□□□□ -1.82
GYPB-204ENST00000504951 NKX2-5P52952 324 aaPredicted RBP3.68□□□□□ -1.82
GYPB-204ENST00000504951 SUMO4Q6EEV6 95 aa3.68□□□□□ -1.82
GYPB-204ENST00000504951 BAGE2Q86Y30 109 aa3.68□□□□□ -1.82
GYPB-204ENST00000504951 C15orf56Q8N910 161 aa3.68□□□□□ -1.82
GYPB-204ENST00000504951 TCEAL7Q9BRU2 100 aa3.68□□□□□ -1.82
GYPB-204ENST00000504951 TRAV26-2A0A0B4J265 109 aa3.67□□□□□ -1.82
GYPB-204ENST00000504951 IGHV1-24A0A0C4DH33 117 aa3.67□□□□□ -1.82
GYPB-204ENST00000504951 MGPP08493 103 aa3.67□□□□□ -1.82
GYPB-204ENST00000504951 RPS10P46783 165 aaKnown RBP3.67□□□□□ -1.82
GYPB-204ENST00000504951 CCL20P78556 96 aa3.67□□□□□ -1.82
GYPB-204ENST00000504951 COX6A2Q02221 97 aa3.67□□□□□ -1.82
GYPB-204ENST00000504951 CFAP161Q6P656 301 aa3.67□□□□□ -1.82
GYPB-204ENST00000504951 TMUB2Q71RG4 321 aa3.67□□□□□ -1.82
GYPB-204ENST00000504951 STPG4Q8N801 248 aa3.67□□□□□ -1.82
GYPB-204ENST00000504951 PRSS3P2Q8NHM4 247 aa3.67□□□□□ -1.82
GYPB-204ENST00000504951 FAM213BQ8TBF2 198 aa3.67□□□□□ -1.82
GYPB-204ENST00000504951 SFT2D1Q8WV19 159 aa3.67□□□□□ -1.82
GYPB-204ENST00000504951 MBD3L1Q8WWY6 194 aa3.67□□□□□ -1.82
GYPB-204ENST00000504951 AP1S3Q96PC3 154 aa3.67□□□□□ -1.82
GYPB-204ENST00000504951 IGLV1-50A0A075B6I6 118 aa3.66□□□□□ -1.82
GYPB-204ENST00000504951 IGKV2-24A0A0C4DH68 120 aa3.66□□□□□ -1.82
GYPB-204ENST00000504951 GAGE12HA6NDE8 117 aa3.66□□□□□ -1.82
GYPB-204ENST00000504951 S100A9P06702 114 aaKnown RBP3.66□□□□□ -1.82
GYPB-204ENST00000504951 SMIM17P0DL12 118 aa3.66□□□□□ -1.82
GYPB-204ENST00000504951 RPL35P42766 123 aaKnown RBP3.66□□□□□ -1.82
GYPB-204ENST00000504951 RNF151Q2KHN1 245 aa3.66□□□□□ -1.82
GYPB-204ENST00000504951 HIGD2BQ4VC39 106 aa3.66□□□□□ -1.82
GYPB-204ENST00000504951 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.66□□□□□ -1.82
GYPB-204ENST00000504951 TMEM243Q9BU79 118 aa3.66□□□□□ -1.82
GYPB-204ENST00000504951 TPPP3Q9BW30 176 aa3.66□□□□□ -1.82
GYPB-204ENST00000504951 A0A096LNI7 61 aa3.65□□□□□ -1.83
GYPB-204ENST00000504951 IGKV3OR2-268A0A0C4DH90 116 aa3.65□□□□□ -1.83
GYPB-204ENST00000504951 RAB19A4D1S5 217 aa3.65□□□□□ -1.83
GYPB-204ENST00000504951 C19orf71A6NCJ1 209 aa3.65□□□□□ -1.83
GYPB-204ENST00000504951 MAJINQ3KP22 176 aa3.65□□□□□ -1.83
GYPB-204ENST00000504951 CENPWQ5EE01 88 aa3.65□□□□□ -1.83
GYPB-204ENST00000504951 RASL11AQ6T310 242 aa3.65□□□□□ -1.83
GYPB-204ENST00000504951 KCNRGQ8N5I3 272 aa3.65□□□□□ -1.83
GYPB-204ENST00000504951 FER1L6-AS1Q8NA97 138 aa3.65□□□□□ -1.83
GYPB-204ENST00000504951 OR2D3Q8NGH3 330 aa3.65□□□□□ -1.83
GYPB-204ENST00000504951 LYPD6BQ8NI32 183 aa3.65□□□□□ -1.83
GYPB-204ENST00000504951 LINC00526Q96FQ7 95 aa3.65□□□□□ -1.83
GYPB-204ENST00000504951 MUC17Q685J3 4493 aa3.65□□□□□ -1.83
GYPB-204ENST00000504951 TRBV20OR9-2A0A075B6H5 130 aa3.64□□□□□ -1.83
GYPB-204ENST00000504951 PFDN1O60925 122 aa3.64□□□□□ -1.83
GYPB-204ENST00000504951 NTF3P20783 257 aa3.64□□□□□ -1.83
GYPB-204ENST00000504951 AMTP48728 403 aa3.64□□□□□ -1.83
GYPB-204ENST00000504951 SULT1A2P50226 295 aa3.64□□□□□ -1.83
GYPB-204ENST00000504951 LYZL1Q6UWQ5 148 aa3.64□□□□□ -1.83
GYPB-204ENST00000504951 Q6ZNX1 250 aa3.64□□□□□ -1.83
GYPB-204ENST00000504951 CHCHD10Q8WYQ3 142 aaPredicted RBP3.64□□□□□ -1.83
GYPB-204ENST00000504951 C11orf52Q96A22 123 aa3.64□□□□□ -1.83
GYPB-204ENST00000504951 PGLYRP4Q96LB8 373 aa3.64□□□□□ -1.83
GYPB-204ENST00000504951 NIT2Q9NQR4 276 aa3.64□□□□□ -1.83
GYPB-204ENST00000504951 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.63□□□□□ -1.83
GYPB-204ENST00000504951 GVQW2A0A096LPI5 108 aaPredicted RBP3.63□□□□□ -1.83
GYPB-204ENST00000504951 IGKV2-29A2NJV5 120 aaPredicted RBP3.63□□□□□ -1.83
GYPB-204ENST00000504951 UMAD1C9J7I0 102 aa3.63□□□□□ -1.83
GYPB-204ENST00000504951 FOXA3P55318 350 aaPredicted RBP3.63□□□□□ -1.83
GYPB-204ENST00000504951 CACNG7P62955 275 aa3.63□□□□□ -1.83
GYPB-204ENST00000504951 FOXI1Q12951 378 aa3.63□□□□□ -1.83
GYPB-204ENST00000504951 COTL1Q14019 142 aa3.63□□□□□ -1.83
GYPB-204ENST00000504951 ZNF345Q14585 488 aa3.63□□□□□ -1.83
GYPB-204ENST00000504951 GATD1Q8NB37 220 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms