RNA–Protein interactions for RNA: ENST00000504905.5

HERC6-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-205ENST00000504905 ATP5L2Q7Z4Y8 100 aa13.55□□□□□ -0.24
HERC6-205ENST00000504905 DEFB104AQ8WTQ1 72 aa13.55□□□□□ -0.24
HERC6-205ENST00000504905 TMEM243Q9BU79 118 aa13.55□□□□□ -0.24
HERC6-205ENST00000504905 ST20Q9HBF5 79 aa13.55□□□□□ -0.24
HERC6-205ENST00000504905 HSPG2P98160 4391 aa13.55□□□□□ -0.24
HERC6-205ENST00000504905 PSCAO43653 123 aa13.54□□□□□ -0.24
HERC6-205ENST00000504905 NCR2O95944 276 aa13.54□□□□□ -0.24
HERC6-205ENST00000504905 AMTP48728 403 aa13.54□□□□□ -0.24
HERC6-205ENST00000504905 MPV17L2Q567V2 206 aa13.54□□□□□ -0.24
HERC6-205ENST00000504905 SMKR1H3BMG3 65 aa13.53□□□□□ -0.24
HERC6-205ENST00000504905 PPP1R17O96001 155 aa13.53□□□□□ -0.24
HERC6-205ENST00000504905 RPS10P46783 165 aaKnown RBP13.53□□□□□ -0.24
HERC6-205ENST00000504905 MRPL51Q4U2R6 128 aaKnown RBP13.53□□□□□ -0.24
HERC6-205ENST00000504905 ATRAIDQ6UW56 229 aa13.53□□□□□ -0.24
HERC6-205ENST00000504905 I3L3M4 83 aa13.52□□□□□ -0.25
HERC6-205ENST00000504905 PMCHP20382 165 aa13.52□□□□□ -0.25
HERC6-205ENST00000504905 TM2D2Q9BX73 214 aa13.52□□□□□ -0.25
HERC6-205ENST00000504905 UBE2L6O14933 153 aa13.51□□□□□ -0.25
HERC6-205ENST00000504905 EREGO14944 169 aa13.51□□□□□ -0.25
HERC6-205ENST00000504905 APOC3P02656 99 aa13.51□□□□□ -0.25
HERC6-205ENST00000504905 ANGP03950 147 aaKnown RBP13.51□□□□□ -0.25
HERC6-205ENST00000504905 Q8N976 141 aa13.51□□□□□ -0.25
HERC6-205ENST00000504905 UBE2WQ96B02 151 aa13.51□□□□□ -0.25
HERC6-205ENST00000504905 TMEM70Q9BUB7 260 aa13.51□□□□□ -0.25
HERC6-205ENST00000504905 CTDSP1Q9GZU7 261 aa13.51□□□□□ -0.25
HERC6-205ENST00000504905 APCSP02743 223 aa13.5□□□□□ -0.25
HERC6-205ENST00000504905 RBX1P62877 108 aa13.5□□□□□ -0.25
HERC6-205ENST00000504905 CLRN3Q8NCR9 226 aa13.5□□□□□ -0.25
HERC6-205ENST00000504905 RMI2Q96E14 147 aa13.5□□□□□ -0.25
HERC6-205ENST00000504905 BTF3L4Q96K17 158 aa13.5□□□□□ -0.25
HERC6-205ENST00000504905 CRPP02741 224 aa13.49□□□□□ -0.25
HERC6-205ENST00000504905 CKS2P33552 79 aa13.49□□□□□ -0.25
HERC6-205ENST00000504905 Q0VG73 95 aa13.49□□□□□ -0.25
HERC6-205ENST00000504905 SVBPQ8N300 66 aa13.49□□□□□ -0.25
HERC6-205ENST00000504905 NRACQ8N912 160 aa13.49□□□□□ -0.25
HERC6-205ENST00000504905 IMMP2LQ96T52 175 aa13.49□□□□□ -0.25
HERC6-205ENST00000504905 A0A087WTM6 91 aa13.48□□□□□ -0.25
HERC6-205ENST00000504905 POLR2KP53803 58 aaKnown RBP13.48□□□□□ -0.25
HERC6-205ENST00000504905 SPATA12Q7Z6I5 190 aa13.48□□□□□ -0.25
HERC6-205ENST00000504905 C7orf77A4D0Y5 90 aa13.47□□□□□ -0.25
HERC6-205ENST00000504905 SNAPINO95295 136 aa13.47□□□□□ -0.25
HERC6-205ENST00000504905 SUMO2P61956 95 aaKnown RBP13.47□□□□□ -0.25
HERC6-205ENST00000504905 RHEBQ15382 184 aa13.47□□□□□ -0.25
HERC6-205ENST00000504905 COX11Q9Y6N1 276 aa13.47□□□□□ -0.25
HERC6-205ENST00000504905 IGKV2D-24A0A075B6R9 120 aa13.46□□□□□ -0.25
HERC6-205ENST00000504905 TRBV27A0A0K0K1C4 114 aa13.46□□□□□ -0.25
HERC6-205ENST00000504905 A0A1B0GUV1 79 aa13.46□□□□□ -0.25
HERC6-205ENST00000504905 TMEM242Q9NWH2 141 aa13.46□□□□□ -0.25
HERC6-205ENST00000504905 D6R8Y8 96 aa13.45□□□□□ -0.26
HERC6-205ENST00000504905 VCYO14598 125 aa13.45□□□□□ -0.26
HERC6-205ENST00000504905 CDK2AP2O75956 126 aa13.45□□□□□ -0.26
HERC6-205ENST00000504905 TSHBP01222 138 aa13.45□□□□□ -0.26
HERC6-205ENST00000504905 PPBPP02775 128 aa13.45□□□□□ -0.26
HERC6-205ENST00000504905 ENHOQ6UWT2 76 aa13.45□□□□□ -0.26
HERC6-205ENST00000504905 RPS10P5Q9NQ39 176 aa13.45□□□□□ -0.26
HERC6-205ENST00000504905 CLPSL2Q6UWE3 100 aa13.44□□□□□ -0.26
HERC6-205ENST00000504905 LINC00269Q8N2A0 174 aa13.44□□□□□ -0.26
HERC6-205ENST00000504905 C20orf78Q9BR46 151 aa13.44□□□□□ -0.26
HERC6-205ENST00000504905 C1orf43Q9BWL3 253 aa13.44□□□□□ -0.26
HERC6-205ENST00000504905 IGLV4-60A0A075B6I1 120 aa13.43□□□□□ -0.26
HERC6-205ENST00000504905 TRBV24-1A0A075B6N3 115 aa13.43□□□□□ -0.26
HERC6-205ENST00000504905 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.43□□□□□ -0.26
HERC6-205ENST00000504905 IGKV2-29A2NJV5 120 aaPredicted RBP13.43□□□□□ -0.26
HERC6-205ENST00000504905 LRCOL1A6NCL2 159 aa13.43□□□□□ -0.26
HERC6-205ENST00000504905 C16orf90A8MZG2 172 aa13.43□□□□□ -0.26
HERC6-205ENST00000504905 H7C423 109 aa13.43□□□□□ -0.26
HERC6-205ENST00000504905 TNFRSF6BO95407 300 aa13.43□□□□□ -0.26
HERC6-205ENST00000504905 S100PP25815 95 aa13.43□□□□□ -0.26
HERC6-205ENST00000504905 FCER1GP30273 86 aa13.43□□□□□ -0.26
HERC6-205ENST00000504905 KRTAP10-2P60368 255 aa13.43□□□□□ -0.26
HERC6-205ENST00000504905 AMMECR1LQ6DCA0 310 aa13.43□□□□□ -0.26
HERC6-205ENST00000504905 ORMDL3Q8N138 153 aa13.43□□□□□ -0.26
HERC6-205ENST00000504905 C20orf203Q8NBC4 194 aa13.43□□□□□ -0.26
HERC6-205ENST00000504905 TRAV9-1A0A075B6T8 112 aa13.42□□□□□ -0.26
HERC6-205ENST00000504905 MIAQ16674 131 aa13.42□□□□□ -0.26
HERC6-205ENST00000504905 KIR2DL4Q99706 377 aa13.42□□□□□ -0.26
HERC6-205ENST00000504905 PRR34Q9NV39 138 aa13.42□□□□□ -0.26
HERC6-205ENST00000504905 PHOX2AO14813 284 aa13.41□□□□□ -0.26
HERC6-205ENST00000504905 NPYP01303 97 aa13.41□□□□□ -0.26
HERC6-205ENST00000504905 ESDP10768 282 aa13.41□□□□□ -0.26
HERC6-205ENST00000504905 REG3AQ06141 175 aa13.41□□□□□ -0.26
HERC6-205ENST00000504905 RNASEKQ6P5S7 137 aaKnown RBP13.41□□□□□ -0.26
HERC6-205ENST00000504905 TMEM136Q6ZRR5 245 aa13.41□□□□□ -0.26
HERC6-205ENST00000504905 LRP1BQ9NZR2 4599 aa13.4□□□□□ -0.26
HERC6-205ENST00000504905 FGF6P10767 208 aa13.4□□□□□ -0.26
HERC6-205ENST00000504905 RPL32P62910 135 aaKnown RBP13.4□□□□□ -0.26
HERC6-205ENST00000504905 MAPKAPK5-AS1Q8N8E1 139 aa13.4□□□□□ -0.26
HERC6-205ENST00000504905 PRELID3AQ96N28 172 aa13.4□□□□□ -0.26
HERC6-205ENST00000504905 SMIM2Q9BVW6 85 aa13.39□□□□□ -0.27
HERC6-205ENST00000504905 PGPEP1Q9NXJ5 209 aa13.39□□□□□ -0.27
HERC6-205ENST00000504905 ZNF25P17030 456 aaPredicted RBP13.38□□□□□ -0.27
HERC6-205ENST00000504905 BAALCQ8WXS3 180 aa13.38□□□□□ -0.27
HERC6-205ENST00000504905 LECT2O14960 151 aa13.37□□□□□ -0.27
HERC6-205ENST00000504905 TCAPO15273 167 aa13.37□□□□□ -0.27
HERC6-205ENST00000504905 CDPF1Q6NVV7 123 aa13.37□□□□□ -0.27
HERC6-205ENST00000504905 Q8N814 137 aa13.37□□□□□ -0.27
HERC6-205ENST00000504905 TMEM101Q96IK0 257 aa13.37□□□□□ -0.27
HERC6-205ENST00000504905 LAMTOR2Q9Y2Q5 125 aa13.37□□□□□ -0.27
HERC6-205ENST00000504905 FUSP35637 526 aaKnown RBP eCLIP13.36□□□□□ -0.27
HERC6-205ENST00000504905 WFDC2Q14508 124 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms