RNA–Protein interactions for RNA: ENST00000504875.5

CSF1R-203, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 1 (best)

Gene CSF1R, Length 3,697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-203ENST00000504875 TOMM6Q96B49 74 aa7.23□□□□□ -1.25
CSF1R-203ENST00000504875 VCX2Q9H322 139 aa7.23□□□□□ -1.25
CSF1R-203ENST00000504875 IGHV3-16A0A0C4DH30 117 aa7.23□□□□□ -1.25
CSF1R-203ENST00000504875 PRADC1Q9BSG0 188 aa7.23□□□□□ -1.25
CSF1R-203ENST00000504875 HHLA3Q9XRX5 114 aa7.23□□□□□ -1.25
CSF1R-203ENST00000504875 STHQ8IWL8 128 aa7.22□□□□□ -1.25
CSF1R-203ENST00000504875 C15orf53Q8NAA6 179 aa7.22□□□□□ -1.25
CSF1R-203ENST00000504875 MYMXA0A1B0GTQ4 84 aa7.22□□□□□ -1.25
CSF1R-203ENST00000504875 NTN5Q8WTR8 489 aaPredicted RBP7.22□□□□□ -1.25
CSF1R-203ENST00000504875 CRLF1O75462 422 aa7.22□□□□□ -1.25
CSF1R-203ENST00000504875 TRPT1Q86TN4 253 aaKnown RBP7.22□□□□□ -1.25
CSF1R-203ENST00000504875 OPRPNQ99935 248 aaPredicted RBP7.22□□□□□ -1.25
CSF1R-203ENST00000504875 TRAV8-4A0A0B4J246 113 aa7.21□□□□□ -1.25
CSF1R-203ENST00000504875 LGALS3P17931 250 aaKnown RBP7.21□□□□□ -1.25
CSF1R-203ENST00000504875 ATP6V0E2Q8NHE4 81 aa7.21□□□□□ -1.25
CSF1R-203ENST00000504875 TCL1BO95988 128 aa7.21□□□□□ -1.26
CSF1R-203ENST00000504875 NHLRC4P0CG21 123 aaPredicted RBP7.21□□□□□ -1.26
CSF1R-203ENST00000504875 P0DMU3 169 aa7.21□□□□□ -1.26
CSF1R-203ENST00000504875 FAM231AP0DMU4 169 aa7.21□□□□□ -1.26
CSF1R-203ENST00000504875 FAM231CP0DMU5 169 aa7.21□□□□□ -1.26
CSF1R-203ENST00000504875 DGAT2L7PQ6IED9 249 aa7.21□□□□□ -1.26
CSF1R-203ENST00000504875 LGALS9O00182 355 aa7.21□□□□□ -1.26
CSF1R-203ENST00000504875 SLC25A20O43772 301 aa7.21□□□□□ -1.26
CSF1R-203ENST00000504875 PMVKQ15126 192 aa7.21□□□□□ -1.26
CSF1R-203ENST00000504875 TAL2Q16559 108 aa7.21□□□□□ -1.26
CSF1R-203ENST00000504875 MORN3Q6PF18 240 aaPredicted RBP7.21□□□□□ -1.26
CSF1R-203ENST00000504875 FAM19A4Q96LR4 140 aa7.21□□□□□ -1.26
CSF1R-203ENST00000504875 A0A096LNT2 108 aa7.2□□□□□ -1.26
CSF1R-203ENST00000504875 IGHV3-38A0A0C4DH36 116 aa7.2□□□□□ -1.26
CSF1R-203ENST00000504875 IGHV3-53P01767 116 aa7.2□□□□□ -1.26
CSF1R-203ENST00000504875 ZNF415Q09FC8 603 aa7.2□□□□□ -1.26
CSF1R-203ENST00000504875 RNASE13Q5GAN3 156 aaKnown RBP7.2□□□□□ -1.26
CSF1R-203ENST00000504875 ITPR3Q14573 2671 aa7.2□□□□□ -1.26
CSF1R-203ENST00000504875 RHODO00212 210 aa7.2□□□□□ -1.26
CSF1R-203ENST00000504875 CD28P10747 220 aa7.2□□□□□ -1.26
CSF1R-203ENST00000504875 NSUN5P1Q3KNT7 163 aa7.2□□□□□ -1.26
CSF1R-203ENST00000504875 C10orf126Q8N4M7 172 aa7.2□□□□□ -1.26
CSF1R-203ENST00000504875 CHCHD5Q9BSY4 110 aa7.2□□□□□ -1.26
CSF1R-203ENST00000504875 PROK1P58294 105 aa7.2□□□□□ -1.26
CSF1R-203ENST00000504875 NEXN-AS1Q8NBZ9 246 aa7.2□□□□□ -1.26
CSF1R-203ENST00000504875 TRAV2A0A0B4J234 112 aa7.19□□□□□ -1.26
CSF1R-203ENST00000504875 TRAV12-1A0A0B4J245 112 aa7.19□□□□□ -1.26
CSF1R-203ENST00000504875 DNAJC9-AS1A6NH13 148 aa7.19□□□□□ -1.26
CSF1R-203ENST00000504875 C11orf86A6NJI1 115 aa7.19□□□□□ -1.26
CSF1R-203ENST00000504875 Q6ZSV7 163 aa7.19□□□□□ -1.26
CSF1R-203ENST00000504875 FASNP49327 2511 aaKnown RBP7.19□□□□□ -1.26
CSF1R-203ENST00000504875 CSMD2Q7Z408 3487 aa7.19□□□□□ -1.26
CSF1R-203ENST00000504875 TRGV1A0A0A0MS02 117 aa7.19□□□□□ -1.26
CSF1R-203ENST00000504875 H3BMM0 161 aa7.19□□□□□ -1.26
CSF1R-203ENST00000504875 I3L3M4 83 aa7.19□□□□□ -1.26
CSF1R-203ENST00000504875 INSP01308 110 aa7.19□□□□□ -1.26
CSF1R-203ENST00000504875 PAPPA-AS1Q5QFB9 102 aa7.19□□□□□ -1.26
CSF1R-203ENST00000504875 ZMAT4Q9H898 229 aa7.19□□□□□ -1.26
CSF1R-203ENST00000504875 C4orf3Q8WVX3 66 aa7.18□□□□□ -1.26
CSF1R-203ENST00000504875 ZNF580Q9UK33 172 aa7.18□□□□□ -1.26
CSF1R-203ENST00000504875 VPS13CQ709C8 3753 aa7.18□□□□□ -1.26
CSF1R-203ENST00000504875 CCL24O00175 119 aa7.18□□□□□ -1.26
CSF1R-203ENST00000504875 LRRC75A-AS1Q8N1F1 130 aa7.18□□□□□ -1.26
CSF1R-203ENST00000504875 ODF3Q96PU9 254 aa7.18□□□□□ -1.26
CSF1R-203ENST00000504875 MAP6D1Q9H9H5 199 aa7.18□□□□□ -1.26
CSF1R-203ENST00000504875 LINC01546A6NGU7 62 aa7.17□□□□□ -1.26
CSF1R-203ENST00000504875 CRYGDP07320 174 aa7.17□□□□□ -1.26
CSF1R-203ENST00000504875 RPL35AP18077 110 aaKnown RBP7.17□□□□□ -1.26
CSF1R-203ENST00000504875 C9orf85Q96MD7 179 aa7.17□□□□□ -1.26
CSF1R-203ENST00000504875 M0QY20 66 aa7.17□□□□□ -1.26
CSF1R-203ENST00000504875 POLR2KP53803 58 aaKnown RBP7.17□□□□□ -1.26
CSF1R-203ENST00000504875 C9orf153Q5TBE3 101 aa7.17□□□□□ -1.26
CSF1R-203ENST00000504875 TMEM141Q96I45 108 aa7.17□□□□□ -1.26
CSF1R-203ENST00000504875 KIF25-AS1Q9Y6Z4 181 aa7.17□□□□□ -1.26
CSF1R-203ENST00000504875 CITED2Q99967 270 aaPredicted RBP7.17□□□□□ -1.26
CSF1R-203ENST00000504875 CR1P17927 2039 aa7.16□□□□□ -1.26
CSF1R-203ENST00000504875 TRBV7-3A0A075B6L6 115 aa7.16□□□□□ -1.26
CSF1R-203ENST00000504875 LOC107984640A0A0U1RRK4 108 aa7.16□□□□□ -1.26
CSF1R-203ENST00000504875 M0R2P5 195 aa7.16□□□□□ -1.26
CSF1R-203ENST00000504875 PRSS2P07478 247 aa7.16□□□□□ -1.26
CSF1R-203ENST00000504875 LINC00315P59091 139 aa7.16□□□□□ -1.26
CSF1R-203ENST00000504875 CEMP1Q6PRD7 247 aaPredicted RBP7.16□□□□□ -1.26
CSF1R-203ENST00000504875 SPXQ9BT56 116 aa7.16□□□□□ -1.26
CSF1R-203ENST00000504875 CHD6Q8TD26 2715 aa7.16□□□□□ -1.26
CSF1R-203ENST00000504875 ZFHX3Q15911 3703 aa7.16□□□□□ -1.26
CSF1R-203ENST00000504875 DEFB114Q30KQ6 69 aa7.16□□□□□ -1.26
CSF1R-203ENST00000504875 PLEKHB2Q96CS7 222 aa7.16□□□□□ -1.26
CSF1R-203ENST00000504875 A0A0J9YXV3 536 aa7.15□□□□□ -1.26
CSF1R-203ENST00000504875 RBMY1A1P0DJD3 496 aaKnown RBP7.15□□□□□ -1.26
CSF1R-203ENST00000504875 RBMY1CP0DJD4 496 aa7.15□□□□□ -1.26
CSF1R-203ENST00000504875 RBMY1FQ15415 496 aaKnown RBP7.15□□□□□ -1.26
CSF1R-203ENST00000504875 TEX49A0A1B0GTD5 131 aa7.15□□□□□ -1.26
CSF1R-203ENST00000504875 MXRA5Q9NR99 2828 aa7.15□□□□□ -1.27
CSF1R-203ENST00000504875 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.15□□□□□ -1.27
CSF1R-203ENST00000504875 IGKV2-29A2NJV5 120 aaPredicted RBP7.15□□□□□ -1.27
CSF1R-203ENST00000504875 NXPH4O95158 308 aa7.15□□□□□ -1.27
CSF1R-203ENST00000504875 LINC00694P0DN24 101 aa7.15□□□□□ -1.27
CSF1R-203ENST00000504875 HECTD1Q9ULT8 2610 aa7.15□□□□□ -1.27
CSF1R-203ENST00000504875 TRBV27A0A0K0K1C4 114 aa7.14□□□□□ -1.27
CSF1R-203ENST00000504875 ADARB2-AS1A8MUL3 147 aa7.14□□□□□ -1.27
CSF1R-203ENST00000504875 FSHBP01225 129 aa7.14□□□□□ -1.27
CSF1R-203ENST00000504875 FBN2P35556 2912 aa7.14□□□□□ -1.27
CSF1R-203ENST00000504875 J3QKU1 62 aa7.14□□□□□ -1.27
CSF1R-203ENST00000504875 RHOHQ15669 191 aa7.14□□□□□ -1.27
CSF1R-203ENST00000504875 TIMM17AQ99595 171 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms