RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 IQCJQ1A5X6 159 aa9.39□□□□□ -0.91
HOXC9-202ENST00000504557 IGLV10-54A0A075B6I4 117 aa9.38□□□□□ -0.91
HOXC9-202ENST00000504557 EPM2AB3EWF7 344 aa9.38□□□□□ -0.91
HOXC9-202ENST00000504557 TMEM241Q24JQ0 296 aa9.38□□□□□ -0.91
HOXC9-202ENST00000504557 CT83Q5H943 113 aa9.38□□□□□ -0.91
HOXC9-202ENST00000504557 TSKUQ8WUA8 353 aa9.38□□□□□ -0.91
HOXC9-202ENST00000504557 IGKV3OR2-268A0A0C4DH90 116 aa9.37□□□□□ -0.91
HOXC9-202ENST00000504557 A0A1B0GUT8 65 aa9.37□□□□□ -0.91
HOXC9-202ENST00000504557 PEA15Q15121 130 aa9.37□□□□□ -0.91
HOXC9-202ENST00000504557 MIAQ16674 131 aa9.37□□□□□ -0.91
HOXC9-202ENST00000504557 OSTCQ9NRP0 149 aa9.37□□□□□ -0.91
HOXC9-202ENST00000504557 FAM30AQ9NZY2 134 aa9.37□□□□□ -0.91
HOXC9-202ENST00000504557 IGLV4-60A0A075B6I1 120 aa9.36□□□□□ -0.91
HOXC9-202ENST00000504557 RPL23P62829 140 aaKnown RBP9.36□□□□□ -0.91
HOXC9-202ENST00000504557 REG3AQ06141 175 aa9.36□□□□□ -0.91
HOXC9-202ENST00000504557 ISOC2Q96AB3 205 aa9.36□□□□□ -0.91
HOXC9-202ENST00000504557 V9GYV3 84 aa9.36□□□□□ -0.91
HOXC9-202ENST00000504557 USP17L23D6RBM5 183 aa9.35□□□□□ -0.91
HOXC9-202ENST00000504557 NDUFS6O75380 124 aaKnown RBP9.35□□□□□ -0.91
HOXC9-202ENST00000504557 GAS8-AS1O95177 125 aa9.35□□□□□ -0.91
HOXC9-202ENST00000504557 FAM74A3Q4VXF1 159 aa9.35□□□□□ -0.91
HOXC9-202ENST00000504557 Q5VSD8 79 aa9.35□□□□□ -0.91
HOXC9-202ENST00000504557 C20orf203Q8NBC4 194 aa9.35□□□□□ -0.91
HOXC9-202ENST00000504557 FRZBQ92765 325 aa9.35□□□□□ -0.91
HOXC9-202ENST00000504557 TMEM70Q9BUB7 260 aa9.35□□□□□ -0.91
HOXC9-202ENST00000504557 GFRA4Q9GZZ7 299 aa9.35□□□□□ -0.91
HOXC9-202ENST00000504557 NAT8Q9UHE5 227 aa9.35□□□□□ -0.91
HOXC9-202ENST00000504557 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.34□□□□□ -0.91
HOXC9-202ENST00000504557 IGKV2-29A2NJV5 120 aaPredicted RBP9.34□□□□□ -0.91
HOXC9-202ENST00000504557 SDHAF1A6NFY7 115 aa9.34□□□□□ -0.91
HOXC9-202ENST00000504557 PMCHP20382 165 aa9.34□□□□□ -0.91
HOXC9-202ENST00000504557 AMMECR1LQ6DCA0 310 aa9.34□□□□□ -0.91
HOXC9-202ENST00000504557 AMN1Q8IY45 258 aa9.34□□□□□ -0.91
HOXC9-202ENST00000504557 PRR34Q9NV39 138 aa9.34□□□□□ -0.91
HOXC9-202ENST00000504557 SMKR1H3BMG3 65 aa9.33□□□□□ -0.92
HOXC9-202ENST00000504557 NCR2O95944 276 aa9.33□□□□□ -0.92
HOXC9-202ENST00000504557 APCSP02743 223 aa9.33□□□□□ -0.92
HOXC9-202ENST00000504557 RIGQ13278 110 aa9.33□□□□□ -0.92
HOXC9-202ENST00000504557 RNASEKQ6P5S7 137 aaKnown RBP9.33□□□□□ -0.92
HOXC9-202ENST00000504557 NUP35Q8NFH5 326 aa9.33□□□□□ -0.92
HOXC9-202ENST00000504557 C14orf177Q52M58 125 aa9.32□□□□□ -0.92
HOXC9-202ENST00000504557 TMEM191AQ9H0A3 160 aa9.32□□□□□ -0.92
HOXC9-202ENST00000504557 ST20Q9HBF5 79 aa9.32□□□□□ -0.92
HOXC9-202ENST00000504557 RAB4AP20338 218 aa9.31□□□□□ -0.92
HOXC9-202ENST00000504557 RPS10P46783 165 aaKnown RBP9.31□□□□□ -0.92
HOXC9-202ENST00000504557 CAMPP49913 170 aa9.31□□□□□ -0.92
HOXC9-202ENST00000504557 RNF185Q96GF1 192 aa9.31□□□□□ -0.92
HOXC9-202ENST00000504557 TMEM242Q9NWH2 141 aa9.31□□□□□ -0.92
HOXC9-202ENST00000504557 NAT8BQ9UHF3 227 aa9.31□□□□□ -0.92
HOXC9-202ENST00000504557 A0A1B0GUV1 79 aa9.3□□□□□ -0.92
HOXC9-202ENST00000504557 FAM231BA6NCW3 169 aa9.3□□□□□ -0.92
HOXC9-202ENST00000504557 I3L3M4 83 aa9.3□□□□□ -0.92
HOXC9-202ENST00000504557 PRSS1P07477 247 aa9.3□□□□□ -0.92
HOXC9-202ENST00000504557 FAM229AH3BQW9 127 aa9.29□□□□□ -0.92
HOXC9-202ENST00000504557 KRTAP26-1Q6PEX3 210 aa9.29□□□□□ -0.92
HOXC9-202ENST00000504557 MRAP2Q96G30 205 aa9.29□□□□□ -0.92
HOXC9-202ENST00000504557 INAFM2P0DMQ5 153 aa9.28□□□□□ -0.92
HOXC9-202ENST00000504557 FGF6P10767 208 aa9.28□□□□□ -0.92
HOXC9-202ENST00000504557 RAB14P61106 215 aa9.28□□□□□ -0.92
HOXC9-202ENST00000504557 MRPL54Q6P161 138 aaKnown RBP9.28□□□□□ -0.92
HOXC9-202ENST00000504557 TRAV8-4A0A0B4J246 113 aa9.27□□□□□ -0.93
HOXC9-202ENST00000504557 TRBV6-5A0A0K0K1A5 114 aa9.27□□□□□ -0.93
HOXC9-202ENST00000504557 SMIM27A0A1W2PRY6 76 aa9.27□□□□□ -0.93
HOXC9-202ENST00000504557 hDV102S1A0JD36 115 aa9.27□□□□□ -0.93
HOXC9-202ENST00000504557 GAGE12HA6NDE8 117 aa9.27□□□□□ -0.93
HOXC9-202ENST00000504557 TSHBP01222 138 aa9.27□□□□□ -0.93
HOXC9-202ENST00000504557 SMDT1Q9H4I9 107 aa9.27□□□□□ -0.93
HOXC9-202ENST00000504557 Q6ZSA8 131 aa9.26□□□□□ -0.93
HOXC9-202ENST00000504557 SCXQ7RTU7 201 aa9.26□□□□□ -0.93
HOXC9-202ENST00000504557 TMEM101Q96IK0 257 aa9.26□□□□□ -0.93
HOXC9-202ENST00000504557 BTF3L4Q96K17 158 aa9.26□□□□□ -0.93
HOXC9-202ENST00000504557 FCER1GP30273 86 aa9.25□□□□□ -0.93
HOXC9-202ENST00000504557 MRPL51Q4U2R6 128 aaKnown RBP9.25□□□□□ -0.93
HOXC9-202ENST00000504557 LINC00528Q8N1L1 170 aa9.25□□□□□ -0.93
HOXC9-202ENST00000504557 H7C423 109 aa9.24□□□□□ -0.93
HOXC9-202ENST00000504557 POLR2KP53803 58 aaKnown RBP9.24□□□□□ -0.93
HOXC9-202ENST00000504557 FAM104BQ5XKR9 115 aa9.24□□□□□ -0.93
HOXC9-202ENST00000504557 OR5A1Q8NGJ0 315 aa9.24□□□□□ -0.93
HOXC9-202ENST00000504557 CHCHD10Q8WYQ3 142 aaPredicted RBP9.24□□□□□ -0.93
HOXC9-202ENST00000504557 DNAH8Q96JB1 4490 aa9.23□□□□□ -0.93
HOXC9-202ENST00000504557 CKS2P33552 79 aa9.23□□□□□ -0.93
HOXC9-202ENST00000504557 SUMO2P61956 95 aaKnown RBP9.23□□□□□ -0.93
HOXC9-202ENST00000504557 HIGD2BQ4VC39 106 aa9.23□□□□□ -0.93
HOXC9-202ENST00000504557 NRACQ8N912 160 aa9.23□□□□□ -0.93
HOXC9-202ENST00000504557 AP5S1Q9NUS5 200 aa9.23□□□□□ -0.93
HOXC9-202ENST00000504557 FAT1Q14517 4588 aa9.22□□□□□ -0.93
HOXC9-202ENST00000504557 TRBV27A0A0K0K1C4 114 aa9.22□□□□□ -0.93
HOXC9-202ENST00000504557 C7orf77A4D0Y5 90 aa9.22□□□□□ -0.93
HOXC9-202ENST00000504557 VCYO14598 125 aa9.22□□□□□ -0.93
HOXC9-202ENST00000504557 ESDP10768 282 aa9.22□□□□□ -0.93
HOXC9-202ENST00000504557 XCL1P47992 114 aa9.22□□□□□ -0.93
HOXC9-202ENST00000504557 HBBP68871 147 aa9.22□□□□□ -0.93
HOXC9-202ENST00000504557 CLRN3Q8NCR9 226 aa9.22□□□□□ -0.93
HOXC9-202ENST00000504557 CHAC1Q9BUX1 264 aa9.22□□□□□ -0.93
HOXC9-202ENST00000504557 FLG2Q5D862 2391 aaPredicted RBP9.22□□□□□ -0.93
HOXC9-202ENST00000504557 A0A1B0GW15 77 aa9.21□□□□□ -0.94
HOXC9-202ENST00000504557 D6R8Y8 96 aa9.21□□□□□ -0.94
HOXC9-202ENST00000504557 PPP1R17O96001 155 aa9.21□□□□□ -0.94
HOXC9-202ENST00000504557 ZNF25P17030 456 aaPredicted RBP9.21□□□□□ -0.94
HOXC9-202ENST00000504557 RNASE13Q5GAN3 156 aaKnown RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 185.7 ms