RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 ADM2Q7Z4H4 148 aa2.73□□□□□ -1.97
PDLIM1P4-201ENST00000504327 SNX29P2Q8IUI4 249 aa2.73□□□□□ -1.97
PDLIM1P4-201ENST00000504327 TEX29Q8N6K0 151 aa2.73□□□□□ -1.97
PDLIM1P4-201ENST00000504327 CYB561D1Q8N8Q1 229 aa2.73□□□□□ -1.97
PDLIM1P4-201ENST00000504327 TNFRSF19Q9NS68 423 aa2.73□□□□□ -1.97
PDLIM1P4-201ENST00000504327 SOX21Q9Y651 276 aaPredicted RBP2.73□□□□□ -1.97
PDLIM1P4-201ENST00000504327 DSCAML1Q8TD84 2053 aa2.73□□□□□ -1.97
PDLIM1P4-201ENST00000504327 UBR4Q5T4S7 5183 aa2.73□□□□□ -1.97
PDLIM1P4-201ENST00000504327 IGHV3-73A0A0B4J1V6 119 aa2.72□□□□□ -1.97
PDLIM1P4-201ENST00000504327 A0A0B4J2C4 111 aa2.72□□□□□ -1.97
PDLIM1P4-201ENST00000504327 TMEM235A6NFC5 223 aa2.72□□□□□ -1.97
PDLIM1P4-201ENST00000504327 GEMIN2O14893 280 aaKnown RBP2.72□□□□□ -1.97
PDLIM1P4-201ENST00000504327 LYRM1O43325 122 aa2.72□□□□□ -1.97
PDLIM1P4-201ENST00000504327 HIST1H2BKO60814 126 aa2.72□□□□□ -1.97
PDLIM1P4-201ENST00000504327 TFF1P04155 84 aa2.72□□□□□ -1.97
PDLIM1P4-201ENST00000504327 HIST1H2BJP06899 126 aa2.72□□□□□ -1.97
PDLIM1P4-201ENST00000504327 FGF7P21781 194 aa2.72□□□□□ -1.97
PDLIM1P4-201ENST00000504327 KRTAP5-9P26371 169 aa2.72□□□□□ -1.97
PDLIM1P4-201ENST00000504327 ZNF79Q15937 498 aa2.72□□□□□ -1.97
PDLIM1P4-201ENST00000504327 MIAQ16674 131 aa2.72□□□□□ -1.97
PDLIM1P4-201ENST00000504327 PIGYQ3MUY2 71 aa2.72□□□□□ -1.97
PDLIM1P4-201ENST00000504327 EIF5AL1Q6IS14 154 aaKnown RBP2.72□□□□□ -1.97
PDLIM1P4-201ENST00000504327 ZFP2Q6ZN57 461 aa2.72□□□□□ -1.97
PDLIM1P4-201ENST00000504327 Q6ZQT7 251 aa2.72□□□□□ -1.97
PDLIM1P4-201ENST00000504327 DEFB108BQ8NET1 73 aa2.72□□□□□ -1.97
PDLIM1P4-201ENST00000504327 OR5H6Q8NGV6 325 aa2.72□□□□□ -1.97
PDLIM1P4-201ENST00000504327 ZC2HC1AQ96GY0 325 aa2.72□□□□□ -1.97
PDLIM1P4-201ENST00000504327 ARHGAP5-AS1Q96IT6 56 aa2.72□□□□□ -1.97
PDLIM1P4-201ENST00000504327 RNF5Q99942 180 aa2.72□□□□□ -1.97
PDLIM1P4-201ENST00000504327 GINS4Q9BRT9 223 aa2.72□□□□□ -1.97
PDLIM1P4-201ENST00000504327 NPCDR1Q9BY65 106 aa2.72□□□□□ -1.97
PDLIM1P4-201ENST00000504327 TTTY13Q9BZ97 58 aa2.72□□□□□ -1.97
PDLIM1P4-201ENST00000504327 SMDT1Q9H4I9 107 aa2.72□□□□□ -1.97
PDLIM1P4-201ENST00000504327 BANF2Q9H503 90 aa2.72□□□□□ -1.97
PDLIM1P4-201ENST00000504327 LINC00312Q9Y6C7 94 aa2.72□□□□□ -1.97
PDLIM1P4-201ENST00000504327 U3KQK5 164 aa2.72□□□□□ -1.97
PDLIM1P4-201ENST00000504327 KIAA2026Q5HYC2 2103 aa2.72□□□□□ -1.97
PDLIM1P4-201ENST00000504327 CUBNO60494 3623 aa2.72□□□□□ -1.97
PDLIM1P4-201ENST00000504327 MGAM2Q2M2H8 2515 aa2.71□□□□□ -1.98
PDLIM1P4-201ENST00000504327 IGKV1D-17A0A075B6S4 117 aa2.71□□□□□ -1.98
PDLIM1P4-201ENST00000504327 TRBV27A0A0K0K1C4 114 aa2.71□□□□□ -1.98
PDLIM1P4-201ENST00000504327 OR2T8A6NH00 312 aa2.71□□□□□ -1.98
PDLIM1P4-201ENST00000504327 B4DSR2 109 aa2.71□□□□□ -1.98
PDLIM1P4-201ENST00000504327 ZNF737O75373 536 aa2.71□□□□□ -1.98
PDLIM1P4-201ENST00000504327 NDUFB6O95139 128 aa2.71□□□□□ -1.98
PDLIM1P4-201ENST00000504327 GYPAP02724 150 aa2.71□□□□□ -1.98
PDLIM1P4-201ENST00000504327 CD3DP04234 171 aa2.71□□□□□ -1.98
PDLIM1P4-201ENST00000504327 MSMBP08118 114 aa2.71□□□□□ -1.98
PDLIM1P4-201ENST00000504327 ZNF728P0DKX0 622 aa2.71□□□□□ -1.98
PDLIM1P4-201ENST00000504327 AKR1D1P51857 326 aa2.71□□□□□ -1.98
PDLIM1P4-201ENST00000504327 HES1Q14469 280 aa2.71□□□□□ -1.98
PDLIM1P4-201ENST00000504327 Q6P435 159 aa2.71□□□□□ -1.98
PDLIM1P4-201ENST00000504327 ZNF880Q6PDB4 577 aa2.71□□□□□ -1.98
PDLIM1P4-201ENST00000504327 SDIM1Q6ZPB5 146 aa2.71□□□□□ -1.98
PDLIM1P4-201ENST00000504327 C6orf201Q7Z4U5 140 aa2.71□□□□□ -1.98
PDLIM1P4-201ENST00000504327 FAM216BQ8N7L0 139 aa2.71□□□□□ -1.98
PDLIM1P4-201ENST00000504327 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.71□□□□□ -1.98
PDLIM1P4-201ENST00000504327 OR8B3Q8NGG8 313 aa2.71□□□□□ -1.98
PDLIM1P4-201ENST00000504327 SMCR5Q8TEV8 140 aa2.71□□□□□ -1.98
PDLIM1P4-201ENST00000504327 ZNF714Q96N38 554 aa2.71□□□□□ -1.98
PDLIM1P4-201ENST00000504327 OR8B2Q96RD0 313 aa2.71□□□□□ -1.98
PDLIM1P4-201ENST00000504327 MIEN1Q9BRT3 115 aa2.71□□□□□ -1.98
PDLIM1P4-201ENST00000504327 TMEM191AQ9H0A3 160 aa2.71□□□□□ -1.98
PDLIM1P4-201ENST00000504327 NIT2Q9NQR4 276 aa2.71□□□□□ -1.98
PDLIM1P4-201ENST00000504327 EPDR1Q9UM22 224 aa2.71□□□□□ -1.98
PDLIM1P4-201ENST00000504327 VWFP04275 2813 aa2.7□□□□□ -1.98
PDLIM1P4-201ENST00000504327 IGKV1OR2-108A0A075B7D4 117 aa2.7□□□□□ -1.98
PDLIM1P4-201ENST00000504327 TRBV6-7A0A0A0MS04 114 aa2.7□□□□□ -1.98
PDLIM1P4-201ENST00000504327 SNRPGP15A8MWD9 76 aa2.7□□□□□ -1.98
PDLIM1P4-201ENST00000504327 A8MWV9 139 aa2.7□□□□□ -1.98
PDLIM1P4-201ENST00000504327 M0R1W7 72 aa2.7□□□□□ -1.98
PDLIM1P4-201ENST00000504327 CREBL2O60519 120 aaPredicted RBP2.7□□□□□ -1.98
PDLIM1P4-201ENST00000504327 YPEL1O60688 119 aa2.7□□□□□ -1.98
PDLIM1P4-201ENST00000504327 TCL1BO95988 128 aa2.7□□□□□ -1.98
PDLIM1P4-201ENST00000504327 IGLV7-43P04211 117 aa2.7□□□□□ -1.98
PDLIM1P4-201ENST00000504327 IGKV1-16P04430 117 aa2.7□□□□□ -1.98
PDLIM1P4-201ENST00000504327 IL5P05113 134 aa2.7□□□□□ -1.98
PDLIM1P4-201ENST00000504327 TRAPPC2P0DI81 140 aa2.7□□□□□ -1.98
PDLIM1P4-201ENST00000504327 TRAPPC2BP0DI82 140 aa2.7□□□□□ -1.98
PDLIM1P4-201ENST00000504327 RNASE4P34096 147 aaKnown RBP2.7□□□□□ -1.98
PDLIM1P4-201ENST00000504327 Q5W150 140 aa2.7□□□□□ -1.98
PDLIM1P4-201ENST00000504327 HEPN1Q6WQI6 88 aa2.7□□□□□ -1.98
PDLIM1P4-201ENST00000504327 GAFA1Q96PS6 74 aa2.7□□□□□ -1.98
PDLIM1P4-201ENST00000504327 CST9LQ9H4G1 147 aa2.7□□□□□ -1.98
PDLIM1P4-201ENST00000504327 ZFP30Q9Y2G7 519 aa2.7□□□□□ -1.98
PDLIM1P4-201ENST00000504327 C19orf71A6NCJ1 209 aa2.69□□□□□ -1.98
PDLIM1P4-201ENST00000504327 A8MUU9 505 aa2.69□□□□□ -1.98
PDLIM1P4-201ENST00000504327 OOSP1A8MZH6 123 aa2.69□□□□□ -1.98
PDLIM1P4-201ENST00000504327 PPYP01298 95 aa2.69□□□□□ -1.98
PDLIM1P4-201ENST00000504327 IFNA17P01571 189 aa2.69□□□□□ -1.98
PDLIM1P4-201ENST00000504327 IL4P05112 153 aa2.69□□□□□ -1.98
PDLIM1P4-201ENST00000504327 CTSDP07339 412 aaPredicted RBP2.69□□□□□ -1.98
PDLIM1P4-201ENST00000504327 NFYAP23511 347 aaPredicted RBP2.69□□□□□ -1.98
PDLIM1P4-201ENST00000504327 CD24P25063 80 aa2.69□□□□□ -1.98
PDLIM1P4-201ENST00000504327 GNG4P50150 75 aa2.69□□□□□ -1.98
PDLIM1P4-201ENST00000504327 EDDM3BP56851 147 aa2.69□□□□□ -1.98
PDLIM1P4-201ENST00000504327 CATR1Q13166 79 aa2.69□□□□□ -1.98
PDLIM1P4-201ENST00000504327 HMGN3Q15651 99 aa2.69□□□□□ -1.98
PDLIM1P4-201ENST00000504327 TEX261Q6UWH6 196 aa2.69□□□□□ -1.98
PDLIM1P4-201ENST00000504327 SIGLECL1Q8N7X8 197 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms