RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 IGLV2-18A0A075B6J9 118 aa6.86□□□□□ -1.31
NUP54-203ENST00000504173 SIVA1O15304 175 aa6.86□□□□□ -1.31
NUP54-203ENST00000504173 APCSP02743 223 aa6.86□□□□□ -1.31
NUP54-203ENST00000504173 MT-ND6P03923 174 aa6.86□□□□□ -1.31
NUP54-203ENST00000504173 COTL1Q14019 142 aa6.86□□□□□ -1.31
NUP54-203ENST00000504173 WFDC10BQ8IUB3 73 aa6.86□□□□□ -1.31
NUP54-203ENST00000504173 Q8N1X5 172 aa6.86□□□□□ -1.31
NUP54-203ENST00000504173 PRELID3AQ96N28 172 aa6.86□□□□□ -1.31
NUP54-203ENST00000504173 YPEL4Q96NS1 127 aa6.86□□□□□ -1.31
NUP54-203ENST00000504173 TMEM70Q9BUB7 260 aa6.86□□□□□ -1.31
NUP54-203ENST00000504173 Q9H8V8 135 aa6.86□□□□□ -1.31
NUP54-203ENST00000504173 TRBV6-8A0A0A6YYG3 113 aa6.85□□□□□ -1.31
NUP54-203ENST00000504173 IGHV1-24A0A0C4DH33 117 aa6.85□□□□□ -1.31
NUP54-203ENST00000504173 I3L3M4 83 aa6.85□□□□□ -1.31
NUP54-203ENST00000504173 PHOX2AO14813 284 aa6.85□□□□□ -1.31
NUP54-203ENST00000504173 ATP6V1G1O75348 118 aa6.85□□□□□ -1.31
NUP54-203ENST00000504173 TNFRSF6BO95407 300 aa6.85□□□□□ -1.31
NUP54-203ENST00000504173 NPYP01303 97 aa6.85□□□□□ -1.31
NUP54-203ENST00000504173 PMCHP20382 165 aa6.85□□□□□ -1.31
NUP54-203ENST00000504173 SUMO2P61956 95 aaKnown RBP6.85□□□□□ -1.31
NUP54-203ENST00000504173 DEFB104AQ8WTQ1 72 aa6.85□□□□□ -1.31
NUP54-203ENST00000504173 APOBP04114 4563 aaKnown RBP6.85□□□□□ -1.31
NUP54-203ENST00000504173 TRBV25-1A0A075B6N4 114 aa6.84□□□□□ -1.31
NUP54-203ENST00000504173 S100A1P23297 94 aa6.84□□□□□ -1.31
NUP54-203ENST00000504173 POLR2KP53803 58 aaKnown RBP6.84□□□□□ -1.31
NUP54-203ENST00000504173 FABP9Q0Z7S8 132 aa6.84□□□□□ -1.31
NUP54-203ENST00000504173 KIAA1644Q3SXP7 199 aa6.84□□□□□ -1.31
NUP54-203ENST00000504173 NTM-AS1Q6ZSK4 140 aa6.84□□□□□ -1.31
NUP54-203ENST00000504173 C20orf78Q9BR46 151 aa6.84□□□□□ -1.31
NUP54-203ENST00000504173 CHCHD5Q9BSY4 110 aa6.84□□□□□ -1.31
NUP54-203ENST00000504173 MRPL18Q9H0U6 180 aaKnown RBP6.84□□□□□ -1.31
NUP54-203ENST00000504173 LAMTOR2Q9Y2Q5 125 aa6.84□□□□□ -1.31
NUP54-203ENST00000504173 TRBV27A0A0K0K1C4 114 aa6.83□□□□□ -1.32
NUP54-203ENST00000504173 M0R2N4 97 aa6.83□□□□□ -1.32
NUP54-203ENST00000504173 VCYO14598 125 aa6.83□□□□□ -1.32
NUP54-203ENST00000504173 SCO1O75880 301 aa6.83□□□□□ -1.32
NUP54-203ENST00000504173 AMTP48728 403 aa6.83□□□□□ -1.32
NUP54-203ENST00000504173 IQCJQ1A5X6 159 aa6.83□□□□□ -1.32
NUP54-203ENST00000504173 TMEM243Q9BU79 118 aa6.83□□□□□ -1.32
NUP54-203ENST00000504173 SMIM2Q9BVW6 85 aa6.83□□□□□ -1.32
NUP54-203ENST00000504173 MAP1LC3AQ9H492 121 aa6.83□□□□□ -1.32
NUP54-203ENST00000504173 TRAPPC1Q9Y5R8 145 aa6.83□□□□□ -1.32
NUP54-203ENST00000504173 NBDYA0A0U1RRE5 68 aa6.82□□□□□ -1.32
NUP54-203ENST00000504173 TMEM262E9PQX1 116 aa6.82□□□□□ -1.32
NUP54-203ENST00000504173 IGHV3-30P01768 117 aa6.82□□□□□ -1.32
NUP54-203ENST00000504173 IGHV3-33P01772 117 aa6.82□□□□□ -1.32
NUP54-203ENST00000504173 DNAH10OSP0CZ25 163 aa6.82□□□□□ -1.32
NUP54-203ENST00000504173 IGHV3-30-3P0DP02 117 aa6.82□□□□□ -1.32
NUP54-203ENST00000504173 IGHV3-30-5P0DP03 117 aa6.82□□□□□ -1.32
NUP54-203ENST00000504173 FCER1GP30273 86 aa6.82□□□□□ -1.32
NUP54-203ENST00000504173 RPL32P62910 135 aaKnown RBP6.82□□□□□ -1.32
NUP54-203ENST00000504173 GAGE6Q13070 117 aa6.82□□□□□ -1.32
NUP54-203ENST00000504173 TTC32Q5I0X7 151 aa6.82□□□□□ -1.32
NUP54-203ENST00000504173 LINC01556Q5JQF7 62 aa6.82□□□□□ -1.32
NUP54-203ENST00000504173 KIR2DL4Q99706 377 aa6.82□□□□□ -1.32
NUP54-203ENST00000504173 TRAV9-2A0A087WT02 112 aa6.81□□□□□ -1.32
NUP54-203ENST00000504173 A0A087WX48 190 aa6.81□□□□□ -1.32
NUP54-203ENST00000504173 LOC389332A0A1B0GUA5 103 aa6.81□□□□□ -1.32
NUP54-203ENST00000504173 PRSS29PA6NIE9 313 aa6.81□□□□□ -1.32
NUP54-203ENST00000504173 UBE2L6O14933 153 aa6.81□□□□□ -1.32
NUP54-203ENST00000504173 TSHBP01222 138 aa6.81□□□□□ -1.32
NUP54-203ENST00000504173 PKIAP61925 76 aa6.81□□□□□ -1.32
NUP54-203ENST00000504173 NIT1Q86X76 327 aa6.81□□□□□ -1.32
NUP54-203ENST00000504173 MYCBP2O75592 4640 aa6.81□□□□□ -1.32
NUP54-203ENST00000504173 LRP1BQ9NZR2 4599 aa6.81□□□□□ -1.32
NUP54-203ENST00000504173 TCAPO15273 167 aa6.8□□□□□ -1.32
NUP54-203ENST00000504173 Q8N3U1 123 aa6.8□□□□□ -1.32
NUP54-203ENST00000504173 C10orf126Q8N4M7 172 aa6.8□□□□□ -1.32
NUP54-203ENST00000504173 ALKBH7Q9BT30 221 aaPredicted RBP6.8□□□□□ -1.32
NUP54-203ENST00000504173 CHCHD7Q9BUK0 85 aa6.8□□□□□ -1.32
NUP54-203ENST00000504173 COLCA2A8K830 154 aa6.79□□□□□ -1.32
NUP54-203ENST00000504173 PRSS47A8MTI9 375 aa6.79□□□□□ -1.32
NUP54-203ENST00000504173 K7EP13 123 aa6.79□□□□□ -1.32
NUP54-203ENST00000504173 RAB5AP20339 215 aa6.79□□□□□ -1.32
NUP54-203ENST00000504173 MPV17L2Q567V2 206 aa6.79□□□□□ -1.32
NUP54-203ENST00000504173 Q6ZR54 194 aa6.79□□□□□ -1.32
NUP54-203ENST00000504173 Q8N8P6 123 aa6.79□□□□□ -1.32
NUP54-203ENST00000504173 KRTAP1-5Q9BYS1 174 aa6.79□□□□□ -1.32
NUP54-203ENST00000504173 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.78□□□□□ -1.32
NUP54-203ENST00000504173 IGKV2-29A2NJV5 120 aaPredicted RBP6.78□□□□□ -1.32
NUP54-203ENST00000504173 RTL8CO15255 209 aa6.78□□□□□ -1.32
NUP54-203ENST00000504173 ESDP10768 282 aa6.78□□□□□ -1.32
NUP54-203ENST00000504173 AMMECR1LQ6DCA0 310 aa6.78□□□□□ -1.32
NUP54-203ENST00000504173 NXT2Q9NPJ8 142 aaKnown RBP6.78□□□□□ -1.32
NUP54-203ENST00000504173 HMCN2Q8NDA2 5059 aa6.78□□□□□ -1.32
NUP54-203ENST00000504173 H7C423 109 aa6.77□□□□□ -1.33
NUP54-203ENST00000504173 IFI27P40305 119 aaPredicted RBP6.77□□□□□ -1.33
NUP54-203ENST00000504173 RBX1P62877 108 aa6.77□□□□□ -1.33
NUP54-203ENST00000504173 RNASEKQ6P5S7 137 aaKnown RBP6.77□□□□□ -1.33
NUP54-203ENST00000504173 Q8N976 141 aa6.77□□□□□ -1.33
NUP54-203ENST00000504173 PRSS3P2Q8NHM4 247 aa6.77□□□□□ -1.33
NUP54-203ENST00000504173 KLK12Q9UKR0 248 aa6.77□□□□□ -1.33
NUP54-203ENST00000504173 IBA57-AS1B1ANH7 110 aa6.76□□□□□ -1.33
NUP54-203ENST00000504173 ANGP03950 147 aaKnown RBP6.76□□□□□ -1.33
NUP54-203ENST00000504173 TRGC2P03986 189 aa6.76□□□□□ -1.33
NUP54-203ENST00000504173 FGF6P10767 208 aa6.76□□□□□ -1.33
NUP54-203ENST00000504173 SMAGPQ0VAQ4 97 aa6.76□□□□□ -1.33
NUP54-203ENST00000504173 C1orf134Q5TEV5 83 aa6.76□□□□□ -1.33
NUP54-203ENST00000504173 C6orf223Q8N319 242 aa6.76□□□□□ -1.33
NUP54-203ENST00000504173 TMEM18Q96B42 140 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms