RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 TEX261Q6UWH6 196 aa7.78□□□□□ -1.16
MED28-203ENST00000503945 ALKAL2Q6UX46 152 aa7.78□□□□□ -1.16
MED28-203ENST00000503945 SCXQ7RTU7 201 aa7.78□□□□□ -1.16
MED28-203ENST00000503945 PGLYRP4Q96LB8 373 aa7.78□□□□□ -1.16
MED28-203ENST00000503945 CNFNQ9BYD5 112 aa7.78□□□□□ -1.16
MED28-203ENST00000503945 hCG_2014768A0A024R1R8 64 aa7.77□□□□□ -1.17
MED28-203ENST00000503945 A8MWL6 223 aa7.77□□□□□ -1.17
MED28-203ENST00000503945 KRTAP29-1A8MX34 341 aaPredicted RBP7.77□□□□□ -1.17
MED28-203ENST00000503945 K7EN84 100 aa7.77□□□□□ -1.17
MED28-203ENST00000503945 GATCO43716 136 aaKnown RBP7.77□□□□□ -1.17
MED28-203ENST00000503945 PRSS1P07477 247 aa7.77□□□□□ -1.17
MED28-203ENST00000503945 CEBPGP53567 150 aa7.77□□□□□ -1.17
MED28-203ENST00000503945 CIRBP-AS1Q8TBR5 109 aa7.77□□□□□ -1.17
MED28-203ENST00000503945 DEFB104AQ8WTQ1 72 aa7.77□□□□□ -1.17
MED28-203ENST00000503945 EIF5A2Q9GZV4 153 aaKnown RBP7.77□□□□□ -1.17
MED28-203ENST00000503945 IGLV10-54A0A075B6I4 117 aa7.76□□□□□ -1.17
MED28-203ENST00000503945 AMTP48728 403 aa7.76□□□□□ -1.17
MED28-203ENST00000503945 GATD1Q8NB37 220 aa7.76□□□□□ -1.17
MED28-203ENST00000503945 C20orf203Q8NBC4 194 aa7.76□□□□□ -1.17
MED28-203ENST00000503945 LYPD6BQ8NI32 183 aa7.76□□□□□ -1.17
MED28-203ENST00000503945 DPH3Q96FX2 82 aa7.76□□□□□ -1.17
MED28-203ENST00000503945 IGLV4-60A0A075B6I1 120 aa7.75□□□□□ -1.17
MED28-203ENST00000503945 FOXA3P55318 350 aaPredicted RBP7.75□□□□□ -1.17
MED28-203ENST00000503945 KRTAP26-1Q6PEX3 210 aa7.75□□□□□ -1.17
MED28-203ENST00000503945 FAM231DQ6ZW35 169 aa7.75□□□□□ -1.17
MED28-203ENST00000503945 C9orf163Q8N9P6 203 aa7.75□□□□□ -1.17
MED28-203ENST00000503945 GTSF1Q8WW33 167 aa7.75□□□□□ -1.17
MED28-203ENST00000503945 BORCS7Q96B45 105 aa7.75□□□□□ -1.17
MED28-203ENST00000503945 LRP1Q07954 4544 aaKnown RBP7.75□□□□□ -1.17
MED28-203ENST00000503945 TRAV26-2A0A0B4J265 109 aa7.74□□□□□ -1.17
MED28-203ENST00000503945 AMMECR1LQ6DCA0 310 aa7.74□□□□□ -1.17
MED28-203ENST00000503945 AP5S1Q9NUS5 200 aa7.74□□□□□ -1.17
MED28-203ENST00000503945 UBR4Q5T4S7 5183 aa7.74□□□□□ -1.17
MED28-203ENST00000503945 hDV102S1A0JD36 115 aa7.73□□□□□ -1.17
MED28-203ENST00000503945 NCR2O95944 276 aa7.73□□□□□ -1.17
MED28-203ENST00000503945 C4orf48Q5BLP8 95 aa7.73□□□□□ -1.17
MED28-203ENST00000503945 CFAP161Q6P656 301 aa7.73□□□□□ -1.17
MED28-203ENST00000503945 FAT3Q8TDW7 4589 aa7.73□□□□□ -1.17
MED28-203ENST00000503945 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.72□□□□□ -1.17
MED28-203ENST00000503945 ZNF727A8MUV8 499 aa7.72□□□□□ -1.17
MED28-203ENST00000503945 H7C423 109 aa7.72□□□□□ -1.17
MED28-203ENST00000503945 NDUFS6O75380 124 aaKnown RBP7.72□□□□□ -1.17
MED28-203ENST00000503945 PMCHP20382 165 aa7.72□□□□□ -1.17
MED28-203ENST00000503945 CT83Q5H943 113 aa7.72□□□□□ -1.17
MED28-203ENST00000503945 SDIM1Q6ZPB5 146 aa7.72□□□□□ -1.17
MED28-203ENST00000503945 RPL39LQ96EH5 51 aaKnown RBP7.72□□□□□ -1.17
MED28-203ENST00000503945 SMIM7Q9BQ49 75 aa7.72□□□□□ -1.17
MED28-203ENST00000503945 HMCN2Q8NDA2 5059 aa7.72□□□□□ -1.17
MED28-203ENST00000503945 IGKV3OR2-268A0A0C4DH90 116 aa7.71□□□□□ -1.18
MED28-203ENST00000503945 SDHAF1A6NFY7 115 aa7.71□□□□□ -1.18
MED28-203ENST00000503945 I3L3M4 83 aa7.71□□□□□ -1.18
MED28-203ENST00000503945 RNASEKQ6P5S7 137 aaKnown RBP7.71□□□□□ -1.18
MED28-203ENST00000503945 TSKUQ8WUA8 353 aa7.71□□□□□ -1.18
MED28-203ENST00000503945 GFRA4Q9GZZ7 299 aa7.71□□□□□ -1.18
MED28-203ENST00000503945 A0A1B0GUT8 65 aa7.7□□□□□ -1.18
MED28-203ENST00000503945 FAM231BA6NCW3 169 aa7.7□□□□□ -1.18
MED28-203ENST00000503945 APCSP02743 223 aa7.7□□□□□ -1.18
MED28-203ENST00000503945 CNBPP62633 177 aaKnown RBP7.7□□□□□ -1.18
MED28-203ENST00000503945 SERTAD4-AS1Q5TG53 156 aa7.7□□□□□ -1.18
MED28-203ENST00000503945 LINC01551Q86U37 167 aa7.7□□□□□ -1.18
MED28-203ENST00000503945 BTF3L4Q96K17 158 aa7.7□□□□□ -1.18
MED28-203ENST00000503945 FAM210AQ96ND0 272 aa7.7□□□□□ -1.18
MED28-203ENST00000503945 ST20Q9HBF5 79 aa7.7□□□□□ -1.18
MED28-203ENST00000503945 GAGE12HA6NDE8 117 aa7.69□□□□□ -1.18
MED28-203ENST00000503945 HIGD1CA8MV81 97 aa7.69□□□□□ -1.18
MED28-203ENST00000503945 FGF6P10767 208 aa7.69□□□□□ -1.18
MED28-203ENST00000503945 KRTAP10-4P60372 401 aaPredicted RBP7.69□□□□□ -1.18
MED28-203ENST00000503945 TMEM241Q24JQ0 296 aa7.69□□□□□ -1.18
MED28-203ENST00000503945 TMEM101Q96IK0 257 aa7.69□□□□□ -1.18
MED28-203ENST00000503945 TMEM191AQ9H0A3 160 aa7.69□□□□□ -1.18
MED28-203ENST00000503945 OSTCQ9NRP0 149 aa7.69□□□□□ -1.18
MED28-203ENST00000503945 IGHV3-64A0A075B6Q5 118 aa7.68□□□□□ -1.18
MED28-203ENST00000503945 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.68□□□□□ -1.18
MED28-203ENST00000503945 TRBV6-5A0A0K0K1A5 114 aa7.68□□□□□ -1.18
MED28-203ENST00000503945 IGKV2-29A2NJV5 120 aaPredicted RBP7.68□□□□□ -1.18
MED28-203ENST00000503945 SRP19P09132 144 aaKnown RBP7.68□□□□□ -1.18
MED28-203ENST00000503945 RIGQ13278 110 aa7.68□□□□□ -1.18
MED28-203ENST00000503945 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.68□□□□□ -1.18
MED28-203ENST00000503945 SLPIP03973 132 aa7.67□□□□□ -1.18
MED28-203ENST00000503945 ZNF25P17030 456 aaPredicted RBP7.67□□□□□ -1.18
MED28-203ENST00000503945 RAB4AP20338 218 aa7.67□□□□□ -1.18
MED28-203ENST00000503945 RPL37AP61513 92 aaKnown RBP7.67□□□□□ -1.18
MED28-203ENST00000503945 FAM74A3Q4VXF1 159 aa7.67□□□□□ -1.18
MED28-203ENST00000503945 CHCHD10Q8WYQ3 142 aaPredicted RBP7.67□□□□□ -1.18
MED28-203ENST00000503945 MRAP2Q96G30 205 aa7.67□□□□□ -1.18
MED28-203ENST00000503945 PKHD1L1Q86WI1 4243 aa7.67□□□□□ -1.18
MED28-203ENST00000503945 VCYO14598 125 aa7.66□□□□□ -1.18
MED28-203ENST00000503945 PPP1R17O96001 155 aa7.66□□□□□ -1.18
MED28-203ENST00000503945 RPS10P46783 165 aaKnown RBP7.66□□□□□ -1.18
MED28-203ENST00000503945 GAS8-AS1O95177 125 aa7.65□□□□□ -1.18
MED28-203ENST00000503945 OXTP01178 125 aa7.65□□□□□ -1.18
MED28-203ENST00000503945 POLR2KP53803 58 aaKnown RBP7.65□□□□□ -1.18
MED28-203ENST00000503945 PEA15Q15121 130 aa7.65□□□□□ -1.18
MED28-203ENST00000503945 NUP35Q8NFH5 326 aa7.65□□□□□ -1.18
MED28-203ENST00000503945 OR5A1Q8NGJ0 315 aa7.65□□□□□ -1.18
MED28-203ENST00000503945 NAT8BQ9UHF3 227 aa7.65□□□□□ -1.18
MED28-203ENST00000503945 PANO1I0J062 215 aa7.64□□□□□ -1.19
MED28-203ENST00000503945 TSHBP01222 138 aa7.64□□□□□ -1.19
MED28-203ENST00000503945 ESDP10768 282 aa7.64□□□□□ -1.19
MED28-203ENST00000503945 SS18Q15532 418 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 142.3 ms