RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 NMUP48645 174 aa15.33■□□□□ 0.04
UBE2D3-216ENST00000503742 PCP2Q8IVA1 136 aa15.33■□□□□ 0.04
UBE2D3-216ENST00000503742 FLNBO75369 2602 aaKnown RBP15.32■□□□□ 0.04
UBE2D3-216ENST00000503742 NOP10Q9NPE3 64 aaKnown RBP15.31■□□□□ 0.04
UBE2D3-216ENST00000503742 ZNF479Q96JC4 524 aa15.31■□□□□ 0.04
UBE2D3-216ENST00000503742 TRAV4A0A0B4J268 109 aa15.3■□□□□ 0.04
UBE2D3-216ENST00000503742 PMVKQ15126 192 aa15.3■□□□□ 0.04
UBE2D3-216ENST00000503742 RRN3P1Q2M238 152 aa15.3■□□□□ 0.04
UBE2D3-216ENST00000503742 TMEM97Q5BJF2 176 aa15.3■□□□□ 0.04
UBE2D3-216ENST00000503742 OVOL2Q9BRP0 275 aa15.3■□□□□ 0.04
UBE2D3-216ENST00000503742 NOTCH3Q9UM47 2321 aa15.3■□□□□ 0.04
UBE2D3-216ENST00000503742 CST9LQ9H4G1 147 aa15.29■□□□□ 0.04
UBE2D3-216ENST00000503742 TEP1Q99973 2627 aaKnown RBP15.28■□□□□ 0.04
UBE2D3-216ENST00000503742 WFDC9Q8NEX5 89 aa15.28■□□□□ 0.04
UBE2D3-216ENST00000503742 IGLV4-69A0A075B6H9 119 aa15.27■□□□□ 0.04
UBE2D3-216ENST00000503742 A6NDN8 102 aa15.27■□□□□ 0.04
UBE2D3-216ENST00000503742 RBX1P62877 108 aa15.27■□□□□ 0.04
UBE2D3-216ENST00000503742 HSD52Q0P140 79 aa15.27■□□□□ 0.03
UBE2D3-216ENST00000503742 ATRQ13535 2644 aa15.27■□□□□ 0.03
UBE2D3-216ENST00000503742 CHCHD7Q9BUK0 85 aa15.25■□□□□ 0.03
UBE2D3-216ENST00000503742 TTTY13Q9BZ97 58 aa15.25■□□□□ 0.03
UBE2D3-216ENST00000503742 PYGO1Q9Y3Y4 419 aa15.25■□□□□ 0.03
UBE2D3-216ENST00000503742 TRBV10-1A0A0K0K1A3 114 aa15.24■□□□□ 0.03
UBE2D3-216ENST00000503742 OPRPNQ99935 248 aaPredicted RBP15.24■□□□□ 0.03
UBE2D3-216ENST00000503742 C11orf86A6NJI1 115 aa15.24■□□□□ 0.03
UBE2D3-216ENST00000503742 K7EQD1 137 aa15.24■□□□□ 0.03
UBE2D3-216ENST00000503742 PAPPA-AS1Q5QFB9 102 aa15.24■□□□□ 0.03
UBE2D3-216ENST00000503742 AMMECR1LQ6DCA0 310 aa15.24■□□□□ 0.03
UBE2D3-216ENST00000503742 IGLV4-3A0A075B6K6 122 aa15.23■□□□□ 0.03
UBE2D3-216ENST00000503742 H3BRM9 83 aa15.23■□□□□ 0.03
UBE2D3-216ENST00000503742 WIPF1O43516 503 aa15.23■□□□□ 0.03
UBE2D3-216ENST00000503742 TRRAPQ9Y4A5 3859 aa15.22■□□□□ 0.03
UBE2D3-216ENST00000503742 FAM104AQ969W3 186 aa15.22■□□□□ 0.03
UBE2D3-216ENST00000503742 TRBV7-3A0A075B6L6 115 aa15.22■□□□□ 0.03
UBE2D3-216ENST00000503742 GAGE12BA1L429 117 aa15.22■□□□□ 0.03
UBE2D3-216ENST00000503742 CIDEAO60543 219 aa15.22■□□□□ 0.03
UBE2D3-216ENST00000503742 GAGE7O76087 117 aa15.22■□□□□ 0.03
UBE2D3-216ENST00000503742 GAGE12FP0CL80 117 aa15.22■□□□□ 0.03
UBE2D3-216ENST00000503742 GAGE12GP0CL81 117 aa15.22■□□□□ 0.03
UBE2D3-216ENST00000503742 GAGE12IP0CL82 117 aa15.22■□□□□ 0.03
UBE2D3-216ENST00000503742 ZNRF2Q8NHG8 242 aa15.22■□□□□ 0.03
UBE2D3-216ENST00000503742 PHLDA1Q8WV24 401 aaPredicted RBP15.22■□□□□ 0.03
UBE2D3-216ENST00000503742 IGHV3-38A0A0C4DH36 116 aa15.21■□□□□ 0.03
UBE2D3-216ENST00000503742 COTL1Q14019 142 aa15.21■□□□□ 0.03
UBE2D3-216ENST00000503742 SLC25A29Q8N8R3 303 aa15.21■□□□□ 0.03
UBE2D3-216ENST00000503742 HIGD1BQ9P298 99 aa15.21■□□□□ 0.03
UBE2D3-216ENST00000503742 E9PLD3 99 aa15.2■□□□□ 0.02
UBE2D3-216ENST00000503742 PCP4P48539 62 aa15.2■□□□□ 0.02
UBE2D3-216ENST00000503742 MAPKAPK5-AS1Q8N8E1 139 aa15.2■□□□□ 0.02
UBE2D3-216ENST00000503742 TRGV2A0A075B6R0 118 aa15.2■□□□□ 0.02
UBE2D3-216ENST00000503742 GTF2H5Q6ZYL4 71 aa15.2■□□□□ 0.02
UBE2D3-216ENST00000503742 TRAV8-6A0A0B4J262 113 aa15.19■□□□□ 0.02
UBE2D3-216ENST00000503742 C9orf118A6NHY6 69 aa15.19■□□□□ 0.02
UBE2D3-216ENST00000503742 CRYBA4P53673 196 aa15.19■□□□□ 0.02
UBE2D3-216ENST00000503742 EMP1P54849 157 aa15.19■□□□□ 0.02
UBE2D3-216ENST00000503742 RPL36AP83881 106 aaKnown RBP15.19■□□□□ 0.02
UBE2D3-216ENST00000503742 NFE4Q86UQ8 179 aa15.19■□□□□ 0.02
UBE2D3-216ENST00000503742 RPL36ALQ969Q0 106 aaKnown RBP15.19■□□□□ 0.02
UBE2D3-216ENST00000503742 X6R8D5 127 aa15.19■□□□□ 0.02
UBE2D3-216ENST00000503742 KRTAP24-1Q3LI83 254 aa15.18■□□□□ 0.02
UBE2D3-216ENST00000503742 AMELXQ99217 191 aa15.18■□□□□ 0.02
UBE2D3-216ENST00000503742 TRBV25-1A0A075B6N4 114 aa15.18■□□□□ 0.02
UBE2D3-216ENST00000503742 KIR2DL5BQ8NHK3 375 aa15.18■□□□□ 0.02
UBE2D3-216ENST00000503742 VCX2Q9H322 139 aa15.18■□□□□ 0.02
UBE2D3-216ENST00000503742 SPANXA1Q9NS26 97 aa15.18■□□□□ 0.02
UBE2D3-216ENST00000503742 UBE2D4Q9Y2X8 147 aa15.18■□□□□ 0.02
UBE2D3-216ENST00000503742 OR11H2Q8NH07 326 aa15.17■□□□□ 0.02
UBE2D3-216ENST00000503742 SMIM9A6NGZ8 99 aa15.16■□□□□ 0.02
UBE2D3-216ENST00000503742 UBE2D3P61077 147 aa15.16■□□□□ 0.02
UBE2D3-216ENST00000503742 UBE2D2P62837 147 aa15.16■□□□□ 0.02
UBE2D3-216ENST00000503742 LINC00612Q8N6U2 182 aa15.16■□□□□ 0.02
UBE2D3-216ENST00000503742 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.16■□□□□ 0.02
UBE2D3-216ENST00000503742 IGKV2-29A2NJV5 120 aaPredicted RBP15.16■□□□□ 0.02
UBE2D3-216ENST00000503742 GAGE10A6NGK3 116 aa15.16■□□□□ 0.02
UBE2D3-216ENST00000503742 OCIAD2Q56VL3 154 aa15.16■□□□□ 0.02
UBE2D3-216ENST00000503742 CEMP1Q6PRD7 247 aaPredicted RBP15.16■□□□□ 0.02
UBE2D3-216ENST00000503742 DAZ4Q86SG3 579 aaKnown RBP15.16■□□□□ 0.02
UBE2D3-216ENST00000503742 PRADC1Q9BSG0 188 aa15.16■□□□□ 0.02
UBE2D3-216ENST00000503742 DAZ3Q9NR90 486 aaKnown RBP15.16■□□□□ 0.02
UBE2D3-216ENST00000503742 TRBV6-4A0A1B0GX49 114 aa15.15■□□□□ 0.02
UBE2D3-216ENST00000503742 K7ERU9 68 aa15.14■□□□□ 0.01
UBE2D3-216ENST00000503742 FHL2Q14192 279 aa15.14■□□□□ 0.01
UBE2D3-216ENST00000503742 CHAC1Q9BUX1 264 aa15.13■□□□□ 0.01
UBE2D3-216ENST00000503742 MYMXA0A1B0GTQ4 84 aa15.13■□□□□ 0.01
UBE2D3-216ENST00000503742 GAGE12JA6NER3 117 aa15.13■□□□□ 0.01
UBE2D3-216ENST00000503742 APOC4P55056 127 aa15.13■□□□□ 0.01
UBE2D3-216ENST00000503742 HERVK_113P61574 105 aa15.13■□□□□ 0.01
UBE2D3-216ENST00000503742 GAGE4Q13068 117 aa15.13■□□□□ 0.01
UBE2D3-216ENST00000503742 GAGE5Q13069 117 aa15.13■□□□□ 0.01
UBE2D3-216ENST00000503742 GAGE13Q4V321 117 aa15.13■□□□□ 0.01
UBE2D3-216ENST00000503742 TMEM170BQ5T4T1 132 aa15.12■□□□□ 0.01
UBE2D3-216ENST00000503742 NTM-AS1Q6ZSK4 140 aa15.12■□□□□ 0.01
UBE2D3-216ENST00000503742 TRGV4A0A0C4DH28 118 aa15.11■□□□□ 0.01
UBE2D3-216ENST00000503742 TIMM21Q9BVV7 248 aa15.11■□□□□ 0.01
UBE2D3-216ENST00000503742 A0A0J9YXV3 536 aa15.11■□□□□ 0.01
UBE2D3-216ENST00000503742 CYSRT1A8MQ03 144 aa15.11■□□□□ 0.01
UBE2D3-216ENST00000503742 K7EP34 96 aa15.11■□□□□ 0.01
UBE2D3-216ENST00000503742 MRPS36P82909 103 aaKnown RBP15.1■□□□□ 0.01
UBE2D3-216ENST00000503742 OR5A1Q8NGJ0 315 aa15.1■□□□□ 0.01
UBE2D3-216ENST00000503742 LOC100131303A0A0U1RQF7 123 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms