RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 PHLDA3Q9Y5J5 127 aa2.1□□□□□ -2.07
NEDD4-204ENST00000503468 TRAV3A0A0B4J244 114 aa2.1□□□□□ -2.07
NEDD4-204ENST00000503468 LEPROTO15243 131 aa2.1□□□□□ -2.07
NEDD4-204ENST00000503468 LMO4P61968 165 aa2.1□□□□□ -2.07
NEDD4-204ENST00000503468 C4orf48Q5BLP8 95 aa2.1□□□□□ -2.07
NEDD4-204ENST00000503468 ZNF491Q8N8L2 437 aa2.1□□□□□ -2.07
NEDD4-204ENST00000503468 PYGO1Q9Y3Y4 419 aa2.1□□□□□ -2.07
NEDD4-204ENST00000503468 DNAH5Q8TE73 4624 aa2.1□□□□□ -2.07
NEDD4-204ENST00000503468 IGHV1-3A0A0C4DH29 117 aa2.1□□□□□ -2.07
NEDD4-204ENST00000503468 NDUFB3O43676 98 aa2.1□□□□□ -2.07
NEDD4-204ENST00000503468 ZNF22P17026 224 aaPredicted RBP2.1□□□□□ -2.07
NEDD4-204ENST00000503468 RBMY1BA6NDE4 496 aaKnown RBP2.1□□□□□ -2.07
NEDD4-204ENST00000503468 RBMY1EA6NEQ0 496 aaKnown RBP2.1□□□□□ -2.07
NEDD4-204ENST00000503468 RBMY1DP0C7P1 496 aaKnown RBP2.1□□□□□ -2.07
NEDD4-204ENST00000503468 RBMY1A1P0DJD3 496 aaKnown RBP2.1□□□□□ -2.07
NEDD4-204ENST00000503468 RBMY1CP0DJD4 496 aa2.1□□□□□ -2.07
NEDD4-204ENST00000503468 RBMY1FQ15415 496 aaKnown RBP2.1□□□□□ -2.07
NEDD4-204ENST00000503468 ZNF876PQ49A33 203 aa2.1□□□□□ -2.07
NEDD4-204ENST00000503468 C9orf85Q96MD7 179 aa2.1□□□□□ -2.07
NEDD4-204ENST00000503468 JPT2Q9H910 190 aa2.1□□□□□ -2.07
NEDD4-204ENST00000503468 LINC00527Q9UJ94 153 aa2.1□□□□□ -2.07
NEDD4-204ENST00000503468 ICOSQ9Y6W8 199 aa2.1□□□□□ -2.07
NEDD4-204ENST00000503468 CELSR3Q9NYQ7 3312 aa2.1□□□□□ -2.07
NEDD4-204ENST00000503468 TRBV7-1A0A0A6YYK4 115 aa2.09□□□□□ -2.07
NEDD4-204ENST00000503468 TRAV13-2A0A0B4J235 113 aa2.09□□□□□ -2.07
NEDD4-204ENST00000503468 TRBV27A0A0K0K1C4 114 aa2.09□□□□□ -2.07
NEDD4-204ENST00000503468 ASPHD1Q5U4P2 390 aa2.09□□□□□ -2.07
NEDD4-204ENST00000503468 AKAP9Q99996 3911 aa2.09□□□□□ -2.07
NEDD4-204ENST00000503468 IGHV3-15A0A0B4J1V0 119 aa2.09□□□□□ -2.07
NEDD4-204ENST00000503468 J3QLI3 93 aa2.09□□□□□ -2.07
NEDD4-204ENST00000503468 C1orf195Q5TG92 126 aa2.09□□□□□ -2.07
NEDD4-204ENST00000503468 C19orf73Q9NVV2 129 aa2.09□□□□□ -2.07
NEDD4-204ENST00000503468 NDUFA12Q9UI09 145 aa2.09□□□□□ -2.07
NEDD4-204ENST00000503468 SIT1Q9Y3P8 196 aa2.09□□□□□ -2.07
NEDD4-204ENST00000503468 SONP18583 2426 aaKnown RBP2.09□□□□□ -2.07
NEDD4-204ENST00000503468 TMEM223A0PJW6 202 aa2.09□□□□□ -2.07
NEDD4-204ENST00000503468 EGR2P11161 476 aaPredicted RBP2.09□□□□□ -2.07
NEDD4-204ENST00000503468 KLRB1Q12918 225 aa2.09□□□□□ -2.07
NEDD4-204ENST00000503468 DGAT2L7PQ6IED9 249 aa2.09□□□□□ -2.07
NEDD4-204ENST00000503468 WFDC3Q8IUB2 231 aa2.09□□□□□ -2.07
NEDD4-204ENST00000503468 EXOC3-AS1Q8N2X6 119 aa2.09□□□□□ -2.07
NEDD4-204ENST00000503468 FAM104AQ969W3 186 aa2.09□□□□□ -2.07
NEDD4-204ENST00000503468 SIRPDQ9H106 197 aa2.09□□□□□ -2.07
NEDD4-204ENST00000503468 IGHV1-18A0A0C4DH31 117 aa2.09□□□□□ -2.08
NEDD4-204ENST00000503468 IGLV2-23P01705 113 aa2.09□□□□□ -2.08
NEDD4-204ENST00000503468 PLA2G5P39877 138 aa2.09□□□□□ -2.08
NEDD4-204ENST00000503468 POLR2KP53803 58 aaKnown RBP2.09□□□□□ -2.08
NEDD4-204ENST00000503468 MIAQ16674 131 aa2.09□□□□□ -2.08
NEDD4-204ENST00000503468 DYNAPQ8N1N2 210 aa2.09□□□□□ -2.08
NEDD4-204ENST00000503468 NRACQ8N912 160 aa2.09□□□□□ -2.08
NEDD4-204ENST00000503468 RNF185Q96GF1 192 aa2.09□□□□□ -2.08
NEDD4-204ENST00000503468 KLK15Q9H2R5 256 aa2.09□□□□□ -2.08
NEDD4-204ENST00000503468 TRAV7A0A075B6U4 112 aa2.09□□□□□ -2.08
NEDD4-204ENST00000503468 TEX49A0A1B0GTD5 131 aa2.09□□□□□ -2.08
NEDD4-204ENST00000503468 C10orf105Q8TEF2 133 aa2.09□□□□□ -2.08
NEDD4-204ENST00000503468 DNAH14Q0VDD8 3507 aa2.09□□□□□ -2.08
NEDD4-204ENST00000503468 PRKDCP78527 4128 aaKnown RBP2.09□□□□□ -2.08
NEDD4-204ENST00000503468 IGKV1D-17A0A075B6S4 117 aa2.08□□□□□ -2.08
NEDD4-204ENST00000503468 IGHV1-2P23083 117 aa2.08□□□□□ -2.08
NEDD4-204ENST00000503468 TFF2Q03403 129 aa2.08□□□□□ -2.08
NEDD4-204ENST00000503468 KLKP1Q107X0 134 aa2.08□□□□□ -2.08
NEDD4-204ENST00000503468 DAZ2Q13117 558 aaKnown RBP2.08□□□□□ -2.08
NEDD4-204ENST00000503468 NSUN5P1Q3KNT7 163 aa2.08□□□□□ -2.08
NEDD4-204ENST00000503468 MORN5Q5VZ52 161 aa2.08□□□□□ -2.08
NEDD4-204ENST00000503468 FAM53AQ6NSI3 398 aaPredicted RBP2.08□□□□□ -2.08
NEDD4-204ENST00000503468 TMEM263Q8WUH6 116 aaKnown RBP2.08□□□□□ -2.08
NEDD4-204ENST00000503468 TMEM243Q9BU79 118 aa2.08□□□□□ -2.08
NEDD4-204ENST00000503468 TP53TG1Q9Y2A0 90 aa2.08□□□□□ -2.08
NEDD4-204ENST00000503468 KIF25-AS1Q9Y6Z4 181 aa2.08□□□□□ -2.08
NEDD4-204ENST00000503468 IGKV1-16P04430 117 aa2.08□□□□□ -2.08
NEDD4-204ENST00000503468 HIST1H4AP62805 103 aaKnown RBP2.08□□□□□ -2.08
NEDD4-204ENST00000503468 DEFB133Q30KQ1 61 aa2.08□□□□□ -2.08
NEDD4-204ENST00000503468 C16orf92Q96LL3 132 aa2.08□□□□□ -2.08
NEDD4-204ENST00000503468 C16orf95Q9H693 158 aa2.08□□□□□ -2.08
NEDD4-204ENST00000503468 NOTCH1P46531 2555 aa2.08□□□□□ -2.08
NEDD4-204ENST00000503468 TRIAP1O43715 76 aa2.08□□□□□ -2.08
NEDD4-204ENST00000503468 IGHV3-9P01782 118 aa2.08□□□□□ -2.08
NEDD4-204ENST00000503468 C20orf203Q8NBC4 194 aa2.08□□□□□ -2.08
NEDD4-204ENST00000503468 C11orf68Q9H3H3 251 aaKnown RBP2.08□□□□□ -2.08
NEDD4-204ENST00000503468 DNAH7Q8WXX0 4024 aa2.08□□□□□ -2.08
NEDD4-204ENST00000503468 FAT2Q9NYQ8 4349 aa2.08□□□□□ -2.08
NEDD4-204ENST00000503468 B4DSR2 109 aa2.08□□□□□ -2.08
NEDD4-204ENST00000503468 MUC7Q8TAX7 377 aa2.08□□□□□ -2.08
NEDD4-204ENST00000503468 DYNLRB2Q8TF09 96 aa2.08□□□□□ -2.08
NEDD4-204ENST00000503468 CCL13Q99616 98 aa2.08□□□□□ -2.08
NEDD4-204ENST00000503468 HSPG2P98160 4391 aa2.08□□□□□ -2.08
NEDD4-204ENST00000503468 C17orf58Q2M2W7 97 aa2.08□□□□□ -2.08
NEDD4-204ENST00000503468 C9orf47Q6ZRZ4 202 aa2.08□□□□□ -2.08
NEDD4-204ENST00000503468 C22orf34Q6ZV56 151 aa2.08□□□□□ -2.08
NEDD4-204ENST00000503468 DPM3Q9P2X0 92 aa2.08□□□□□ -2.08
NEDD4-204ENST00000503468 SORL1Q92673 2214 aa2.08□□□□□ -2.08
NEDD4-204ENST00000503468 IGHV1-58A0A0C4DH39 117 aa2.07□□□□□ -2.08
NEDD4-204ENST00000503468 IGIPA6NJ69 53 aa2.07□□□□□ -2.08
NEDD4-204ENST00000503468 H7C423 109 aa2.07□□□□□ -2.08
NEDD4-204ENST00000503468 I3L2K1 104 aa2.07□□□□□ -2.08
NEDD4-204ENST00000503468 ERC2-IT1O76042 136 aa2.07□□□□□ -2.08
NEDD4-204ENST00000503468 CRPP02741 224 aa2.07□□□□□ -2.08
NEDD4-204ENST00000503468 RNASE4P34096 147 aaKnown RBP2.07□□□□□ -2.08
NEDD4-204ENST00000503468 ZNF134P52741 427 aa2.07□□□□□ -2.08
NEDD4-204ENST00000503468 HIST2H2BCQ6DN03 193 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms