RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 IQCJQ1A5X6 159 aa11.13□□□□□ -0.63
SCLT1-205ENST00000503401 C10orf126Q8N4M7 172 aa11.13□□□□□ -0.63
SCLT1-205ENST00000503401 TMEM70Q9BUB7 260 aa11.13□□□□□ -0.63
SCLT1-205ENST00000503401 TRBV24-1A0A075B6N3 115 aa11.12□□□□□ -0.63
SCLT1-205ENST00000503401 A0A087WX48 190 aa11.12□□□□□ -0.63
SCLT1-205ENST00000503401 COLCA2A8K830 154 aa11.12□□□□□ -0.63
SCLT1-205ENST00000503401 MPV17L2Q567V2 206 aa11.12□□□□□ -0.63
SCLT1-205ENST00000503401 TRAV9-1A0A075B6T8 112 aa11.11□□□□□ -0.63
SCLT1-205ENST00000503401 K7EP13 123 aa11.11□□□□□ -0.63
SCLT1-205ENST00000503401 PMCHP20382 165 aa11.11□□□□□ -0.63
SCLT1-205ENST00000503401 AMTP48728 403 aa11.11□□□□□ -0.63
SCLT1-205ENST00000503401 POLR2KP53803 58 aaKnown RBP11.11□□□□□ -0.63
SCLT1-205ENST00000503401 Q9HAA7 133 aa11.11□□□□□ -0.63
SCLT1-205ENST00000503401 IBA57-AS1B1ANH7 110 aa11.1□□□□□ -0.63
SCLT1-205ENST00000503401 I3L3M4 83 aa11.1□□□□□ -0.63
SCLT1-205ENST00000503401 SUMO2P61956 95 aaKnown RBP11.1□□□□□ -0.63
SCLT1-205ENST00000503401 Q8N976 141 aa11.1□□□□□ -0.63
SCLT1-205ENST00000503401 TMEM243Q9BU79 118 aa11.1□□□□□ -0.63
SCLT1-205ENST00000503401 PRSS29PA6NIE9 313 aa11.09□□□□□ -0.63
SCLT1-205ENST00000503401 TNFRSF6BO95407 300 aa11.09□□□□□ -0.63
SCLT1-205ENST00000503401 NPYP01303 97 aa11.09□□□□□ -0.63
SCLT1-205ENST00000503401 TMEM136Q6ZRR5 245 aa11.09□□□□□ -0.63
SCLT1-205ENST00000503401 KLK12Q9UKR0 248 aa11.09□□□□□ -0.63
SCLT1-205ENST00000503401 PKHD1P08F94 4074 aa11.09□□□□□ -0.63
SCLT1-205ENST00000503401 PPP1R17O96001 155 aa11.09□□□□□ -0.63
SCLT1-205ENST00000503401 TSHBP01222 138 aa11.09□□□□□ -0.63
SCLT1-205ENST00000503401 Q6ZRN7 208 aaPredicted RBP11.09□□□□□ -0.63
SCLT1-205ENST00000503401 ORMDL3Q8N138 153 aa11.09□□□□□ -0.63
SCLT1-205ENST00000503401 TRBV27A0A0K0K1C4 114 aa11.08□□□□□ -0.64
SCLT1-205ENST00000503401 APCSP02743 223 aa11.08□□□□□ -0.64
SCLT1-205ENST00000503401 TNP2Q05952 138 aa11.08□□□□□ -0.64
SCLT1-205ENST00000503401 LINC00336Q6ZUF6 198 aa11.08□□□□□ -0.64
SCLT1-205ENST00000503401 TGIF2-C20orf24A0A0A6YYL0 155 aa11.07□□□□□ -0.64
SCLT1-205ENST00000503401 PPBPP02775 128 aa11.07□□□□□ -0.64
SCLT1-205ENST00000503401 RBX1P62877 108 aa11.07□□□□□ -0.64
SCLT1-205ENST00000503401 PRELID3AQ96N28 172 aa11.07□□□□□ -0.64
SCLT1-205ENST00000503401 CHCHD7Q9BUK0 85 aa11.07□□□□□ -0.64
SCLT1-205ENST00000503401 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.06□□□□□ -0.64
SCLT1-205ENST00000503401 IGKV2-29A2NJV5 120 aaPredicted RBP11.06□□□□□ -0.64
SCLT1-205ENST00000503401 VCYO14598 125 aa11.06□□□□□ -0.64
SCLT1-205ENST00000503401 UBE2L6O14933 153 aa11.06□□□□□ -0.64
SCLT1-205ENST00000503401 ANGP03950 147 aaKnown RBP11.06□□□□□ -0.64
SCLT1-205ENST00000503401 BTF3P20290 206 aaKnown RBP11.06□□□□□ -0.64
SCLT1-205ENST00000503401 LAGE3Q14657 143 aa11.06□□□□□ -0.64
SCLT1-205ENST00000503401 KIAA1644Q3SXP7 199 aa11.06□□□□□ -0.64
SCLT1-205ENST00000503401 C20orf78Q9BR46 151 aa11.06□□□□□ -0.64
SCLT1-205ENST00000503401 PKIAP61925 76 aa11.05□□□□□ -0.64
SCLT1-205ENST00000503401 CLPSL2Q6UWE3 100 aa11.05□□□□□ -0.64
SCLT1-205ENST00000503401 NFE4Q86UQ8 179 aa11.05□□□□□ -0.64
SCLT1-205ENST00000503401 UBE2WQ96B02 151 aa11.05□□□□□ -0.64
SCLT1-205ENST00000503401 IGLV4-60A0A075B6I1 120 aa11.04□□□□□ -0.64
SCLT1-205ENST00000503401 FCER1GP30273 86 aa11.04□□□□□ -0.64
SCLT1-205ENST00000503401 SMIM2Q9BVW6 85 aa11.04□□□□□ -0.64
SCLT1-205ENST00000503401 LOC389332A0A1B0GUA5 103 aa11.03□□□□□ -0.64
SCLT1-205ENST00000503401 PHOX2AO14813 284 aa11.03□□□□□ -0.64
SCLT1-205ENST00000503401 HLA-DQA1P01909 254 aa11.03□□□□□ -0.64
SCLT1-205ENST00000503401 RAB5AP20339 215 aa11.03□□□□□ -0.64
SCLT1-205ENST00000503401 C20orf203Q8NBC4 194 aa11.03□□□□□ -0.64
SCLT1-205ENST00000503401 KIR2DL4Q99706 377 aa11.03□□□□□ -0.64
SCLT1-205ENST00000503401 GNB1LQ9BYB4 327 aa11.03□□□□□ -0.64
SCLT1-205ENST00000503401 TRAV8-3A0A0A6YYJ7 113 aa11.02□□□□□ -0.64
SCLT1-205ENST00000503401 LOC105371267A0A1B0GV96 52 aa11.02□□□□□ -0.64
SCLT1-205ENST00000503401 ESDP10768 282 aa11.02□□□□□ -0.64
SCLT1-205ENST00000503401 ENHOQ6UWT2 76 aa11.02□□□□□ -0.64
SCLT1-205ENST00000503401 LINC00269Q8N2A0 174 aa11.02□□□□□ -0.64
SCLT1-205ENST00000503401 A0A1B0GVY2 172 aa11.02□□□□□ -0.65
SCLT1-205ENST00000503401 TCAPO15273 167 aa11.02□□□□□ -0.65
SCLT1-205ENST00000503401 RPL32P62910 135 aaKnown RBP11.02□□□□□ -0.65
SCLT1-205ENST00000503401 RNASEKQ6P5S7 137 aaKnown RBP11.02□□□□□ -0.65
SCLT1-205ENST00000503401 A0A1B0GUV1 79 aa11.01□□□□□ -0.65
SCLT1-205ENST00000503401 PSCAO43653 123 aa11.01□□□□□ -0.65
SCLT1-205ENST00000503401 CRPP02741 224 aa11.01□□□□□ -0.65
SCLT1-205ENST00000503401 FGF6P10767 208 aa11.01□□□□□ -0.65
SCLT1-205ENST00000503401 AMMECR1LQ6DCA0 310 aa11.01□□□□□ -0.65
SCLT1-205ENST00000503401 DNAH5Q8TE73 4624 aa11.01□□□□□ -0.65
SCLT1-205ENST00000503401 DYNC1H1Q14204 4646 aaKnown RBP11□□□□□ -0.65
SCLT1-205ENST00000503401 IGKV2D-24A0A075B6R9 120 aa11□□□□□ -0.65
SCLT1-205ENST00000503401 MRPL18Q9H0U6 180 aaKnown RBP11□□□□□ -0.65
SCLT1-205ENST00000503401 MAP1LC3AQ9H492 121 aa11□□□□□ -0.65
SCLT1-205ENST00000503401 LAMTOR2Q9Y2Q5 125 aa11□□□□□ -0.65
SCLT1-205ENST00000503401 TMA7Q9Y2S6 64 aaKnown RBP11□□□□□ -0.65
SCLT1-205ENST00000503401 FABP9Q0Z7S8 132 aa10.99□□□□□ -0.65
SCLT1-205ENST00000503401 COX19Q49B96 90 aa10.99□□□□□ -0.65
SCLT1-205ENST00000503401 H7C423 109 aa10.98□□□□□ -0.65
SCLT1-205ENST00000503401 Q0VG73 95 aa10.98□□□□□ -0.65
SCLT1-205ENST00000503401 PRR34Q9NV39 138 aa10.98□□□□□ -0.65
SCLT1-205ENST00000503401 MT-ND6P03923 174 aa10.98□□□□□ -0.65
SCLT1-205ENST00000503401 REG3AQ06141 175 aa10.98□□□□□ -0.65
SCLT1-205ENST00000503401 IGKV3OR2-268A0A0C4DH90 116 aa10.97□□□□□ -0.65
SCLT1-205ENST00000503401 PRSS47A8MTI9 375 aa10.97□□□□□ -0.65
SCLT1-205ENST00000503401 RPL39P62891 51 aaKnown RBP10.97□□□□□ -0.65
SCLT1-205ENST00000503401 MAPKAPK5-AS1Q8N8E1 139 aa10.97□□□□□ -0.65
SCLT1-205ENST00000503401 TM2D2Q9BX73 214 aa10.97□□□□□ -0.65
SCLT1-205ENST00000503401 TRAPPC1Q9Y5R8 145 aa10.97□□□□□ -0.65
SCLT1-205ENST00000503401 IGLV10-54A0A075B6I4 117 aa10.96□□□□□ -0.65
SCLT1-205ENST00000503401 RMI2Q96E14 147 aa10.96□□□□□ -0.65
SCLT1-205ENST00000503401 ALKBH7Q9BT30 221 aaPredicted RBP10.96□□□□□ -0.65
SCLT1-205ENST00000503401 C1orf43Q9BWL3 253 aa10.96□□□□□ -0.65
SCLT1-205ENST00000503401 A0A087WTM6 91 aa10.95□□□□□ -0.66
SCLT1-205ENST00000503401 FUSP35637 526 aaKnown RBP eCLIP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms