RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 BAGE2Q86Y30 109 aa10.76□□□□□ -0.69
SCLT1-204ENST00000503215 NTN5Q8WTR8 489 aaPredicted RBP10.76□□□□□ -0.69
SCLT1-204ENST00000503215 GNG13Q9P2W3 67 aa10.76□□□□□ -0.69
SCLT1-204ENST00000503215 TRAV9-1A0A075B6T8 112 aa10.75□□□□□ -0.69
SCLT1-204ENST00000503215 INAFM2P0DMQ5 153 aa10.75□□□□□ -0.69
SCLT1-204ENST00000503215 NIT1Q86X76 327 aa10.75□□□□□ -0.69
SCLT1-204ENST00000503215 TM2D2Q9BX73 214 aa10.75□□□□□ -0.69
SCLT1-204ENST00000503215 FLG2Q5D862 2391 aaPredicted RBP10.74□□□□□ -0.69
SCLT1-204ENST00000503215 TRAV8-3A0A0A6YYJ7 113 aa10.74□□□□□ -0.69
SCLT1-204ENST00000503215 CEBPGP53567 150 aa10.74□□□□□ -0.69
SCLT1-204ENST00000503215 UBE2D3P61077 147 aa10.74□□□□□ -0.69
SCLT1-204ENST00000503215 UBE2D2P62837 147 aa10.74□□□□□ -0.69
SCLT1-204ENST00000503215 BAALCQ8WXS3 180 aa10.74□□□□□ -0.69
SCLT1-204ENST00000503215 MEF2BQ02080 365 aaPredicted RBP10.73□□□□□ -0.69
SCLT1-204ENST00000503215 PDZD11Q5EBL8 140 aa10.73□□□□□ -0.69
SCLT1-204ENST00000503215 PRR27Q6MZM9 219 aa10.73□□□□□ -0.69
SCLT1-204ENST00000503215 SMIM7Q9BQ49 75 aa10.73□□□□□ -0.69
SCLT1-204ENST00000503215 TMEM70Q9BUB7 260 aa10.73□□□□□ -0.69
SCLT1-204ENST00000503215 DERL1Q9BUN8 251 aa10.73□□□□□ -0.69
SCLT1-204ENST00000503215 KLK12Q9UKR0 248 aa10.73□□□□□ -0.69
SCLT1-204ENST00000503215 VPS13BQ7Z7G8 4022 aa10.72□□□□□ -0.69
SCLT1-204ENST00000503215 LINC01620Q4KN68 170 aa10.72□□□□□ -0.69
SCLT1-204ENST00000503215 SSBP4Q9BWG4 385 aaPredicted RBP10.72□□□□□ -0.69
SCLT1-204ENST00000503215 DNAH8Q96JB1 4490 aa10.72□□□□□ -0.69
SCLT1-204ENST00000503215 SRRM2Q9UQ35 2752 aaKnown RBP10.71□□□□□ -0.69
SCLT1-204ENST00000503215 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.71□□□□□ -0.69
SCLT1-204ENST00000503215 TRBV7-3A0A075B6L6 115 aa10.71□□□□□ -0.69
SCLT1-204ENST00000503215 TRBV10-1A0A0K0K1A3 114 aa10.71□□□□□ -0.69
SCLT1-204ENST00000503215 RPL36AP83881 106 aaKnown RBP10.71□□□□□ -0.69
SCLT1-204ENST00000503215 NEXN-AS1Q8NBZ9 246 aa10.71□□□□□ -0.69
SCLT1-204ENST00000503215 RPL36ALQ969Q0 106 aaKnown RBP10.71□□□□□ -0.69
SCLT1-204ENST00000503215 DLEU1O43261 78 aa10.7□□□□□ -0.7
SCLT1-204ENST00000503215 SNAI2O43623 268 aa10.7□□□□□ -0.7
SCLT1-204ENST00000503215 ESDP10768 282 aa10.7□□□□□ -0.7
SCLT1-204ENST00000503215 RPL23P62829 140 aaKnown RBP10.7□□□□□ -0.7
SCLT1-204ENST00000503215 SNHG12Q9BXW3 62 aa10.7□□□□□ -0.7
SCLT1-204ENST00000503215 IGKV2D-24A0A075B6R9 120 aa10.69□□□□□ -0.7
SCLT1-204ENST00000503215 ZNF56Q15929 161 aa10.69□□□□□ -0.7
SCLT1-204ENST00000503215 OR10G8Q8NGN5 311 aa10.69□□□□□ -0.7
SCLT1-204ENST00000503215 UBE2WQ96B02 151 aa10.69□□□□□ -0.7
SCLT1-204ENST00000503215 HERC1Q15751 4861 aa10.69□□□□□ -0.7
SCLT1-204ENST00000503215 OR5AL1P0C617 328 aa10.68□□□□□ -0.7
SCLT1-204ENST00000503215 ADIRFQ15847 76 aa10.68□□□□□ -0.7
SCLT1-204ENST00000503215 C11orf52Q96A22 123 aa10.68□□□□□ -0.7
SCLT1-204ENST00000503215 KIF25-AS1Q9Y6Z4 181 aa10.68□□□□□ -0.7
SCLT1-204ENST00000503215 A0A087WX48 190 aa10.67□□□□□ -0.7
SCLT1-204ENST00000503215 PDE6DO43924 150 aa10.67□□□□□ -0.7
SCLT1-204ENST00000503215 IGLV2-8P01709 118 aa10.67□□□□□ -0.7
SCLT1-204ENST00000503215 COX19Q49B96 90 aa10.67□□□□□ -0.7
SCLT1-204ENST00000503215 SPANXN1Q5VSR9 72 aa10.67□□□□□ -0.7
SCLT1-204ENST00000503215 MIEN1Q9BRT3 115 aa10.67□□□□□ -0.7
SCLT1-204ENST00000503215 TRBV6-8A0A0A6YYG3 113 aa10.66□□□□□ -0.7
SCLT1-204ENST00000503215 TMEM262E9PQX1 116 aa10.66□□□□□ -0.7
SCLT1-204ENST00000503215 F5H697 171 aa10.66□□□□□ -0.7
SCLT1-204ENST00000503215 CENPWQ5EE01 88 aa10.66□□□□□ -0.7
SCLT1-204ENST00000503215 Q6ZSA8 131 aa10.66□□□□□ -0.7
SCLT1-204ENST00000503215 NTM-AS1Q6ZSK4 140 aa10.66□□□□□ -0.7
SCLT1-204ENST00000503215 DMBT1Q9UGM3 2413 aaPredicted RBP10.66□□□□□ -0.7
SCLT1-204ENST00000503215 MYCBP2O75592 4640 aa10.66□□□□□ -0.7
SCLT1-204ENST00000503215 FAM229AH3BQW9 127 aa10.65□□□□□ -0.7
SCLT1-204ENST00000503215 ZNF25P17030 456 aaPredicted RBP10.65□□□□□ -0.7
SCLT1-204ENST00000503215 ENHOQ6UWT2 76 aa10.65□□□□□ -0.7
SCLT1-204ENST00000503215 TEX43Q6ZNM6 134 aa10.65□□□□□ -0.7
SCLT1-204ENST00000503215 MPV17L2Q567V2 206 aa10.65□□□□□ -0.71
SCLT1-204ENST00000503215 RMI2Q96E14 147 aa10.65□□□□□ -0.71
SCLT1-204ENST00000503215 COX11Q9Y6N1 276 aa10.65□□□□□ -0.71
SCLT1-204ENST00000503215 SCGB1D1O95968 90 aa10.64□□□□□ -0.71
SCLT1-204ENST00000503215 ANKRD39Q53RE8 183 aa10.64□□□□□ -0.71
SCLT1-204ENST00000503215 Q8N976 141 aa10.64□□□□□ -0.71
SCLT1-204ENST00000503215 OR2D3Q8NGH3 330 aa10.64□□□□□ -0.71
SCLT1-204ENST00000503215 CHCHD7Q9BUK0 85 aa10.64□□□□□ -0.71
SCLT1-204ENST00000503215 TPPP3Q9BW30 176 aa10.64□□□□□ -0.71
SCLT1-204ENST00000503215 TRAPPC1Q9Y5R8 145 aa10.64□□□□□ -0.71
SCLT1-204ENST00000503215 TRBV20OR9-2A0A075B6H5 130 aa10.63□□□□□ -0.71
SCLT1-204ENST00000503215 C19orf71A6NCJ1 209 aa10.63□□□□□ -0.71
SCLT1-204ENST00000503215 IGLC6P0CF74 106 aa10.63□□□□□ -0.71
SCLT1-204ENST00000503215 CHCHD5Q9BSY4 110 aa10.63□□□□□ -0.71
SCLT1-204ENST00000503215 COL5A1-AS1Q5SY13 56 aa10.62□□□□□ -0.71
SCLT1-204ENST00000503215 FER1L6-AS1Q8NA97 138 aa10.62□□□□□ -0.71
SCLT1-204ENST00000503215 M0QY20 66 aa10.61□□□□□ -0.71
SCLT1-204ENST00000503215 ANGP03950 147 aaKnown RBP10.61□□□□□ -0.71
SCLT1-204ENST00000503215 MGPP08493 103 aa10.61□□□□□ -0.71
SCLT1-204ENST00000503215 Q0VG73 95 aa10.61□□□□□ -0.71
SCLT1-204ENST00000503215 GAGE6Q13070 117 aa10.61□□□□□ -0.71
SCLT1-204ENST00000503215 AP1S3Q96PC3 154 aa10.61□□□□□ -0.71
SCLT1-204ENST00000503215 SMIM17P0DL12 118 aa10.6□□□□□ -0.71
SCLT1-204ENST00000503215 GNG4P50150 75 aa10.6□□□□□ -0.71
SCLT1-204ENST00000503215 SUMO4Q6EEV6 95 aa10.6□□□□□ -0.71
SCLT1-204ENST00000503215 DAZAP1Q96EP5 407 aaKnown RBP10.6□□□□□ -0.71
SCLT1-204ENST00000503215 RBX1P62877 108 aa10.59□□□□□ -0.71
SCLT1-204ENST00000503215 CLPSL2Q6UWE3 100 aa10.59□□□□□ -0.71
SCLT1-204ENST00000503215 SCXQ7RTU7 201 aa10.59□□□□□ -0.71
SCLT1-204ENST00000503215 LINC01551Q86U37 167 aa10.59□□□□□ -0.71
SCLT1-204ENST00000503215 LINC00528Q8N1L1 170 aa10.59□□□□□ -0.71
SCLT1-204ENST00000503215 DEFB104AQ8WTQ1 72 aa10.59□□□□□ -0.71
SCLT1-204ENST00000503215 C1orf43Q9BWL3 253 aa10.59□□□□□ -0.71
SCLT1-204ENST00000503215 MT-ND6P03923 174 aa10.58□□□□□ -0.72
SCLT1-204ENST00000503215 LYZL1Q6UWQ5 148 aa10.58□□□□□ -0.72
SCLT1-204ENST00000503215 C20orf202A1L168 122 aa10.57□□□□□ -0.72
SCLT1-204ENST00000503215 P01737 135 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms