RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 JMJD7-PLA2G4BH0Y9G9 81 aa12.98□□□□□ -0.33
HMGXB3-201ENST00000502717 CCDC179H3BU77 68 aa12.98□□□□□ -0.33
HMGXB3-201ENST00000502717 ZNF843Q8N446 348 aa12.98□□□□□ -0.33
HMGXB3-201ENST00000502717 IGF1P05019 195 aa12.98□□□□□ -0.33
HMGXB3-201ENST00000502717 ZFP36P26651 326 aaKnown RBP12.98□□□□□ -0.33
HMGXB3-201ENST00000502717 COX7B2Q8TF08 81 aa12.98□□□□□ -0.33
HMGXB3-201ENST00000502717 A0A0J9YX75 114 aa12.97□□□□□ -0.33
HMGXB3-201ENST00000502717 C22orf34Q6ZV56 151 aa12.97□□□□□ -0.33
HMGXB3-201ENST00000502717 NRGNQ92686 78 aa12.97□□□□□ -0.33
HMGXB3-201ENST00000502717 IGLV4-3A0A075B6K6 122 aa12.97□□□□□ -0.33
HMGXB3-201ENST00000502717 TRBV27A0A0K0K1C4 114 aa12.97□□□□□ -0.33
HMGXB3-201ENST00000502717 EBI3Q14213 229 aa12.97□□□□□ -0.33
HMGXB3-201ENST00000502717 hADV29S1A0JD25 119 aa12.97□□□□□ -0.33
HMGXB3-201ENST00000502717 TMEM258P61165 79 aa12.97□□□□□ -0.33
HMGXB3-201ENST00000502717 BLCAPP62952 87 aa12.97□□□□□ -0.33
HMGXB3-201ENST00000502717 IL17DQ8TAD2 202 aa12.97□□□□□ -0.33
HMGXB3-201ENST00000502717 CENPFP49454 3210 aa12.97□□□□□ -0.33
HMGXB3-201ENST00000502717 IGHV4OR15-8A0A075B7B6 117 aa12.96□□□□□ -0.33
HMGXB3-201ENST00000502717 A0A087WW49 117 aa12.96□□□□□ -0.33
HMGXB3-201ENST00000502717 LECT2O14960 151 aa12.96□□□□□ -0.33
HMGXB3-201ENST00000502717 TRBV6-5A0A0K0K1A5 114 aa12.96□□□□□ -0.34
HMGXB3-201ENST00000502717 COX8CQ7Z4L0 72 aa12.96□□□□□ -0.34
HMGXB3-201ENST00000502717 CEMP1Q6PRD7 247 aaPredicted RBP12.96□□□□□ -0.34
HMGXB3-201ENST00000502717 ODF3Q96PU9 254 aa12.96□□□□□ -0.34
HMGXB3-201ENST00000502717 ZNF462Q96JM2 2506 aa12.95□□□□□ -0.34
HMGXB3-201ENST00000502717 HIST2H2BCQ6DN03 193 aa12.95□□□□□ -0.34
HMGXB3-201ENST00000502717 HIST2H2BDQ6DRA6 164 aa12.95□□□□□ -0.34
HMGXB3-201ENST00000502717 C20orf173Q96LM9 149 aa12.95□□□□□ -0.34
HMGXB3-201ENST00000502717 CLPSL1A2RUU4 121 aa12.95□□□□□ -0.34
HMGXB3-201ENST00000502717 TRBV12-3P01733 135 aa12.95□□□□□ -0.34
HMGXB3-201ENST00000502717 IGHG2P01859 326 aa12.95□□□□□ -0.34
HMGXB3-201ENST00000502717 UBE2D3P61077 147 aa12.95□□□□□ -0.34
HMGXB3-201ENST00000502717 UBE2D2P62837 147 aa12.95□□□□□ -0.34
HMGXB3-201ENST00000502717 Q6ZS46 218 aa12.94□□□□□ -0.34
HMGXB3-201ENST00000502717 TMEM61Q8N0U2 210 aa12.94□□□□□ -0.34
HMGXB3-201ENST00000502717 NACAE9PAV3 2078 aa12.94□□□□□ -0.34
HMGXB3-201ENST00000502717 K7EQD1 137 aa12.94□□□□□ -0.34
HMGXB3-201ENST00000502717 PSMB8P28062 276 aa12.94□□□□□ -0.34
HMGXB3-201ENST00000502717 TMEM263Q8WUH6 116 aaKnown RBP12.94□□□□□ -0.34
HMGXB3-201ENST00000502717 M0QY20 66 aa12.93□□□□□ -0.34
HMGXB3-201ENST00000502717 C5orf38Q86SI9 138 aa12.93□□□□□ -0.34
HMGXB3-201ENST00000502717 POLR2KP53803 58 aaKnown RBP12.92□□□□□ -0.34
HMGXB3-201ENST00000502717 C5orf47Q569G3 176 aa12.92□□□□□ -0.34
HMGXB3-201ENST00000502717 Q9HAA7 133 aa12.92□□□□□ -0.34
HMGXB3-201ENST00000502717 LST1O00453 97 aa12.92□□□□□ -0.34
HMGXB3-201ENST00000502717 MIR7-3HGQ8N6C7 128 aa12.92□□□□□ -0.34
HMGXB3-201ENST00000502717 EXPH5Q8NEV8 1989 aa12.91□□□□□ -0.34
HMGXB3-201ENST00000502717 NDUFA7O95182 113 aa12.91□□□□□ -0.34
HMGXB3-201ENST00000502717 LINC01548A6NM66 108 aa12.91□□□□□ -0.34
HMGXB3-201ENST00000502717 NOP10Q9NPE3 64 aaKnown RBP12.91□□□□□ -0.34
HMGXB3-201ENST00000502717 PYGO1Q9Y3Y4 419 aa12.91□□□□□ -0.34
HMGXB3-201ENST00000502717 ZFYVE26Q68DK2 2539 aa12.91□□□□□ -0.34
HMGXB3-201ENST00000502717 C14orf132Q9NPU4 83 aa12.91□□□□□ -0.34
HMGXB3-201ENST00000502717 TIMM17BO60830 172 aa12.9□□□□□ -0.34
HMGXB3-201ENST00000502717 XCL1P47992 114 aa12.9□□□□□ -0.34
HMGXB3-201ENST00000502717 SVIPQ8NHG7 77 aa12.9□□□□□ -0.34
HMGXB3-201ENST00000502717 LINC00308Q8TCZ7 52 aa12.9□□□□□ -0.34
HMGXB3-201ENST00000502717 TLN1Q9Y490 2541 aaKnown RBP12.9□□□□□ -0.34
HMGXB3-201ENST00000502717 CDKN2A-AS1Q9UH64 79 aa12.9□□□□□ -0.34
HMGXB3-201ENST00000502717 IGHV4-38-2P0DP08 117 aa12.9□□□□□ -0.34
HMGXB3-201ENST00000502717 RNASE3P12724 160 aaKnown RBP12.9□□□□□ -0.34
HMGXB3-201ENST00000502717 PIEZO2Q9H5I5 2752 aa12.89□□□□□ -0.35
HMGXB3-201ENST00000502717 FAM240AA0A1B0GVK7 77 aa12.89□□□□□ -0.35
HMGXB3-201ENST00000502717 C1orf43Q9BWL3 253 aa12.89□□□□□ -0.35
HMGXB3-201ENST00000502717 KLK5Q9Y337 293 aaPredicted RBP12.89□□□□□ -0.35
HMGXB3-201ENST00000502717 JMJD1CQ15652 2540 aa12.89□□□□□ -0.35
HMGXB3-201ENST00000502717 IGIPA6NJ69 53 aa12.88□□□□□ -0.35
HMGXB3-201ENST00000502717 NDUFA1O15239 70 aa12.88□□□□□ -0.35
HMGXB3-201ENST00000502717 TMEM89A2RUT3 159 aa12.88□□□□□ -0.35
HMGXB3-201ENST00000502717 PRR9Q5T870 116 aa12.88□□□□□ -0.35
HMGXB3-201ENST00000502717 PSMG3-AS1Q96PY0 264 aa12.88□□□□□ -0.35
HMGXB3-201ENST00000502717 DNAH12Q6ZR08 3092 aa12.88□□□□□ -0.35
HMGXB3-201ENST00000502717 SORL1Q92673 2214 aa12.87□□□□□ -0.35
HMGXB3-201ENST00000502717 H7C423 109 aa12.87□□□□□ -0.35
HMGXB3-201ENST00000502717 TMEM256-PLSCR3K7ERE1 68 aa12.87□□□□□ -0.35
HMGXB3-201ENST00000502717 APRG1Q8IVJ8 170 aa12.87□□□□□ -0.35
HMGXB3-201ENST00000502717 IGLV2-18A0A075B6J9 118 aa12.87□□□□□ -0.35
HMGXB3-201ENST00000502717 H3BQ85 93 aa12.87□□□□□ -0.35
HMGXB3-201ENST00000502717 SDIM1Q6ZPB5 146 aa12.86□□□□□ -0.35
HMGXB3-201ENST00000502717 TIRAPP58753 221 aa12.86□□□□□ -0.35
HMGXB3-201ENST00000502717 TRBV10-1A0A0K0K1A3 114 aa12.86□□□□□ -0.35
HMGXB3-201ENST00000502717 Q8N6K4 173 aa12.86□□□□□ -0.35
HMGXB3-201ENST00000502717 LRRK2Q5S007 2527 aa12.86□□□□□ -0.35
HMGXB3-201ENST00000502717 ZNF561-AS1K7EIQ3 104 aa12.85□□□□□ -0.35
HMGXB3-201ENST00000502717 FASNP49327 2511 aaKnown RBP12.85□□□□□ -0.35
HMGXB3-201ENST00000502717 CDIP1Q9H305 208 aa12.85□□□□□ -0.35
HMGXB3-201ENST00000502717 TSHBP01222 138 aa12.84□□□□□ -0.35
HMGXB3-201ENST00000502717 SHISA2Q6UWI4 295 aa12.84□□□□□ -0.35
HMGXB3-201ENST00000502717 PKIGQ9Y2B9 76 aa12.84□□□□□ -0.35
HMGXB3-201ENST00000502717 UTRNP46939 3433 aa12.84□□□□□ -0.35
HMGXB3-201ENST00000502717 F8WEM9 126 aa12.84□□□□□ -0.35
HMGXB3-201ENST00000502717 TNFRSF13BO14836 293 aaPredicted RBP12.84□□□□□ -0.35
HMGXB3-201ENST00000502717 TRAV25A0A0B4J276 109 aa12.84□□□□□ -0.35
HMGXB3-201ENST00000502717 ANGP03950 147 aaKnown RBP12.84□□□□□ -0.35
HMGXB3-201ENST00000502717 SLURP1P55000 103 aa12.84□□□□□ -0.35
HMGXB3-201ENST00000502717 LINC00467Q9BRT7 94 aa12.84□□□□□ -0.35
HMGXB3-201ENST00000502717 CCL18P55774 89 aa12.83□□□□□ -0.35
HMGXB3-201ENST00000502717 COX7CP15954 63 aa12.83□□□□□ -0.36
HMGXB3-201ENST00000502717 CLPSL2Q6UWE3 100 aa12.83□□□□□ -0.36
HMGXB3-201ENST00000502717 DEFB136Q30KP8 78 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms