RNA–Protein interactions for RNA: ENST00000498595.5

HDLBP-247, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-247ENST00000498595 C9orf163Q8N9P6 203 aa9.38□□□□□ -0.91
HDLBP-247ENST00000498595 DNAH8Q96JB1 4490 aa9.38□□□□□ -0.91
HDLBP-247ENST00000498595 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.37□□□□□ -0.91
HDLBP-247ENST00000498595 RPL37AP61513 92 aaKnown RBP9.37□□□□□ -0.91
HDLBP-247ENST00000498595 C20orf203Q8NBC4 194 aa9.37□□□□□ -0.91
HDLBP-247ENST00000498595 KRTAP26-1Q6PEX3 210 aa9.36□□□□□ -0.91
HDLBP-247ENST00000498595 DPH3Q96FX2 82 aa9.36□□□□□ -0.91
HDLBP-247ENST00000498595 RNASE7Q9H1E1 156 aaKnown RBP9.36□□□□□ -0.91
HDLBP-247ENST00000498595 IGLV4-60A0A075B6I1 120 aa9.35□□□□□ -0.91
HDLBP-247ENST00000498595 AMMECR1LQ6DCA0 310 aa9.35□□□□□ -0.91
HDLBP-247ENST00000498595 TEX261Q6UWH6 196 aa9.35□□□□□ -0.91
HDLBP-247ENST00000498595 CNFNQ9BYD5 112 aa9.35□□□□□ -0.91
HDLBP-247ENST00000498595 OXTP01178 125 aa9.34□□□□□ -0.91
HDLBP-247ENST00000498595 CNBPP62633 177 aaKnown RBP9.34□□□□□ -0.91
HDLBP-247ENST00000498595 BLOC1S1P78537 153 aa9.34□□□□□ -0.91
HDLBP-247ENST00000498595 CFAP161Q6P656 301 aa9.34□□□□□ -0.91
HDLBP-247ENST00000498595 OCC1Q8TAD7 63 aa9.34□□□□□ -0.91
HDLBP-247ENST00000498595 BORCS7Q96B45 105 aa9.34□□□□□ -0.91
HDLBP-247ENST00000498595 IGHV3-64A0A075B6Q5 118 aa9.33□□□□□ -0.92
HDLBP-247ENST00000498595 GATCO43716 136 aaKnown RBP9.33□□□□□ -0.92
HDLBP-247ENST00000498595 GATD1Q8NB37 220 aa9.33□□□□□ -0.92
HDLBP-247ENST00000498595 TRAV26-2A0A0B4J265 109 aa9.32□□□□□ -0.92
HDLBP-247ENST00000498595 IGKV3OR2-268A0A0C4DH90 116 aa9.32□□□□□ -0.92
HDLBP-247ENST00000498595 A8MWL6 223 aa9.32□□□□□ -0.92
HDLBP-247ENST00000498595 TMEM250H0YL14 139 aa9.32□□□□□ -0.92
HDLBP-247ENST00000498595 K7EN84 100 aa9.32□□□□□ -0.92
HDLBP-247ENST00000498595 NCR2O95944 276 aa9.32□□□□□ -0.92
HDLBP-247ENST00000498595 CEBPGP53567 150 aa9.32□□□□□ -0.92
HDLBP-247ENST00000498595 AKAP14Q86UN6 197 aa9.32□□□□□ -0.92
HDLBP-247ENST00000498595 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.32□□□□□ -0.92
HDLBP-247ENST00000498595 APCSP02743 223 aa9.31□□□□□ -0.92
HDLBP-247ENST00000498595 KRTAP10-4P60372 401 aaPredicted RBP9.31□□□□□ -0.92
HDLBP-247ENST00000498595 SERTAD4-AS1Q5TG53 156 aa9.31□□□□□ -0.92
HDLBP-247ENST00000498595 RNASEKQ6P5S7 137 aaKnown RBP9.31□□□□□ -0.92
HDLBP-247ENST00000498595 SDIM1Q6ZPB5 146 aa9.31□□□□□ -0.92
HDLBP-247ENST00000498595 GFRA4Q9GZZ7 299 aa9.31□□□□□ -0.92
HDLBP-247ENST00000498595 GAGE12HA6NDE8 117 aa9.3□□□□□ -0.92
HDLBP-247ENST00000498595 H7C423 109 aa9.3□□□□□ -0.92
HDLBP-247ENST00000498595 RPL39LQ96EH5 51 aaKnown RBP9.3□□□□□ -0.92
HDLBP-247ENST00000498595 BTF3L4Q96K17 158 aa9.3□□□□□ -0.92
HDLBP-247ENST00000498595 PMCHP20382 165 aa9.29□□□□□ -0.92
HDLBP-247ENST00000498595 ALKAL2Q6UX46 152 aa9.29□□□□□ -0.92
HDLBP-247ENST00000498595 FAM231DQ6ZW35 169 aa9.29□□□□□ -0.92
HDLBP-247ENST00000498595 GTSF1Q8WW33 167 aa9.29□□□□□ -0.92
HDLBP-247ENST00000498595 RNF185Q96GF1 192 aa9.29□□□□□ -0.92
HDLBP-247ENST00000498595 TMEM101Q96IK0 257 aa9.29□□□□□ -0.92
HDLBP-247ENST00000498595 SDHAF1A6NFY7 115 aa9.28□□□□□ -0.92
HDLBP-247ENST00000498595 CT83Q5H943 113 aa9.28□□□□□ -0.92
HDLBP-247ENST00000498595 Q6ZNX1 250 aa9.28□□□□□ -0.92
HDLBP-247ENST00000498595 EIF5A2Q9GZV4 153 aaKnown RBP9.28□□□□□ -0.92
HDLBP-247ENST00000498595 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.27□□□□□ -0.93
HDLBP-247ENST00000498595 IGKV2-29A2NJV5 120 aaPredicted RBP9.27□□□□□ -0.93
HDLBP-247ENST00000498595 I3L3M4 83 aa9.27□□□□□ -0.93
HDLBP-247ENST00000498595 FGF6P10767 208 aa9.27□□□□□ -0.93
HDLBP-247ENST00000498595 ZNF25P17030 456 aaPredicted RBP9.27□□□□□ -0.93
HDLBP-247ENST00000498595 CHCHD10Q8WYQ3 142 aaPredicted RBP9.27□□□□□ -0.93
HDLBP-247ENST00000498595 PANO1I0J062 215 aa9.26□□□□□ -0.93
HDLBP-247ENST00000498595 RPS10P46783 165 aaKnown RBP9.26□□□□□ -0.93
HDLBP-247ENST00000498595 FOXA3P55318 350 aaPredicted RBP9.26□□□□□ -0.93
HDLBP-247ENST00000498595 CIRBPQ14011 172 aaKnown RBP9.26□□□□□ -0.93
HDLBP-247ENST00000498595 SMIM7Q9BQ49 75 aa9.26□□□□□ -0.93
HDLBP-247ENST00000498595 ST20Q9HBF5 79 aa9.26□□□□□ -0.93
HDLBP-247ENST00000498595 hCG_2014768A0A024R1R8 64 aa9.25□□□□□ -0.93
HDLBP-247ENST00000498595 A0A1B0GUT8 65 aa9.25□□□□□ -0.93
HDLBP-247ENST00000498595 HIGD2BQ4VC39 106 aa9.25□□□□□ -0.93
HDLBP-247ENST00000498595 OR5A1Q8NGJ0 315 aa9.25□□□□□ -0.93
HDLBP-247ENST00000498595 C7orf33Q8WU49 177 aa9.25□□□□□ -0.93
HDLBP-247ENST00000498595 MRAP2Q96G30 205 aa9.25□□□□□ -0.93
HDLBP-247ENST00000498595 FAM210AQ96ND0 272 aa9.25□□□□□ -0.93
HDLBP-247ENST00000498595 A0A087WYN8 130 aa9.24□□□□□ -0.93
HDLBP-247ENST00000498595 TRBV6-5A0A0K0K1A5 114 aa9.24□□□□□ -0.93
HDLBP-247ENST00000498595 C15orf56Q8N910 161 aa9.24□□□□□ -0.93
HDLBP-247ENST00000498595 SPACA4Q8TDM5 124 aa9.24□□□□□ -0.93
HDLBP-247ENST00000498595 TSKUQ8WUA8 353 aa9.24□□□□□ -0.93
HDLBP-247ENST00000498595 PKIGQ9Y2B9 76 aa9.24□□□□□ -0.93
HDLBP-247ENST00000498595 ZNF727A8MUV8 499 aa9.23□□□□□ -0.93
HDLBP-247ENST00000498595 HIGD1CA8MV81 97 aa9.23□□□□□ -0.93
HDLBP-247ENST00000498595 NDUFS6O75380 124 aaKnown RBP9.23□□□□□ -0.93
HDLBP-247ENST00000498595 SLPIP03973 132 aa9.23□□□□□ -0.93
HDLBP-247ENST00000498595 CHTF8P0CG12 524 aa9.23□□□□□ -0.93
HDLBP-247ENST00000498595 LYPD6BQ8NI32 183 aa9.23□□□□□ -0.93
HDLBP-247ENST00000498595 TMEM191AQ9H0A3 160 aa9.23□□□□□ -0.93
HDLBP-247ENST00000498595 GVQW2A0A096LPI5 108 aaPredicted RBP9.22□□□□□ -0.93
HDLBP-247ENST00000498595 FAM231BA6NCW3 169 aa9.22□□□□□ -0.93
HDLBP-247ENST00000498595 XCL1P47992 114 aa9.22□□□□□ -0.93
HDLBP-247ENST00000498595 COX6A2Q02221 97 aa9.22□□□□□ -0.93
HDLBP-247ENST00000498595 SS18Q15532 418 aa9.22□□□□□ -0.93
HDLBP-247ENST00000498595 LINC01551Q86U37 167 aa9.22□□□□□ -0.93
HDLBP-247ENST00000498595 TMEM242Q9NWH2 141 aa9.22□□□□□ -0.93
HDLBP-247ENST00000498595 IGKV2-24A0A0C4DH68 120 aa9.21□□□□□ -0.94
HDLBP-247ENST00000498595 PPP1R17O96001 155 aa9.21□□□□□ -0.94
HDLBP-247ENST00000498595 HNRNPA3P51991 378 aaKnown RBP9.21□□□□□ -0.94
HDLBP-247ENST00000498595 SMAGPQ0VAQ4 97 aa9.21□□□□□ -0.94
HDLBP-247ENST00000498595 MAJINQ3KP22 176 aa9.21□□□□□ -0.94
HDLBP-247ENST00000498595 Q6ZRU5 148 aa9.21□□□□□ -0.94
HDLBP-247ENST00000498595 OSTCQ9NRP0 149 aa9.21□□□□□ -0.94
HDLBP-247ENST00000498595 PLAC8Q9NZF1 115 aa9.21□□□□□ -0.94
HDLBP-247ENST00000498595 C7orf77A4D0Y5 90 aa9.2□□□□□ -0.94
HDLBP-247ENST00000498595 CCL25O15444 150 aa9.2□□□□□ -0.94
HDLBP-247ENST00000498595 TSHBP01222 138 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms