RNA–Protein interactions for RNA: ENST00000498497.2

PBX1-211, Transcript of PBX homeobox 1, humanhuman

TSL 3

Gene PBX1, Length 3,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-211ENST00000498497 CLPSL1A2RUU4 121 aa8.67□□□□□ -1.02
PBX1-211ENST00000498497 RBMY1BA6NDE4 496 aaKnown RBP8.67□□□□□ -1.02
PBX1-211ENST00000498497 RBMY1EA6NEQ0 496 aaKnown RBP8.67□□□□□ -1.02
PBX1-211ENST00000498497 PRB2P02812 416 aaPredicted RBP8.67□□□□□ -1.02
PBX1-211ENST00000498497 RBMY1DP0C7P1 496 aaKnown RBP8.67□□□□□ -1.02
PBX1-211ENST00000498497 RBMY1A1P0DJD3 496 aaKnown RBP8.67□□□□□ -1.02
PBX1-211ENST00000498497 RBMY1CP0DJD4 496 aa8.67□□□□□ -1.02
PBX1-211ENST00000498497 RBMY1FQ15415 496 aaKnown RBP8.67□□□□□ -1.02
PBX1-211ENST00000498497 ZNF876PQ49A33 203 aa8.67□□□□□ -1.02
PBX1-211ENST00000498497 PVRIGQ6DKI7 326 aa8.67□□□□□ -1.02
PBX1-211ENST00000498497 BPESC1Q9GZL8 116 aa8.67□□□□□ -1.02
PBX1-211ENST00000498497 RNF223E7ERA6 249 aa8.67□□□□□ -1.02
PBX1-211ENST00000498497 PDE6HQ13956 83 aa8.67□□□□□ -1.02
PBX1-211ENST00000498497 MUC6Q6W4X9 2439 aa8.66□□□□□ -1.02
PBX1-211ENST00000498497 LRCOL1A6NCL2 159 aa8.66□□□□□ -1.02
PBX1-211ENST00000498497 TRBV12-3P01733 135 aa8.66□□□□□ -1.02
PBX1-211ENST00000498497 IGHV3OR16-10A0A075B7F0 116 aa8.65□□□□□ -1.02
PBX1-211ENST00000498497 CD28P10747 220 aa8.65□□□□□ -1.02
PBX1-211ENST00000498497 ENHOQ6UWT2 76 aa8.65□□□□□ -1.02
PBX1-211ENST00000498497 TMEM178BH3BS89 294 aa8.65□□□□□ -1.02
PBX1-211ENST00000498497 FP248Q71RG6 208 aaPredicted RBP8.65□□□□□ -1.02
PBX1-211ENST00000498497 RMI2Q96E14 147 aa8.65□□□□□ -1.02
PBX1-211ENST00000498497 DYNLRB1Q9NP97 96 aa8.65□□□□□ -1.02
PBX1-211ENST00000498497 SUMO4Q6EEV6 95 aa8.65□□□□□ -1.03
PBX1-211ENST00000498497 TIMM17BO60830 172 aa8.64□□□□□ -1.03
PBX1-211ENST00000498497 RPL28P46779 137 aaKnown RBP8.64□□□□□ -1.03
PBX1-211ENST00000498497 LYNX1G3V0Z9 82 aa8.64□□□□□ -1.03
PBX1-211ENST00000498497 IGHV1-46P01743 117 aa8.64□□□□□ -1.03
PBX1-211ENST00000498497 LYNX1P0DP58 116 aa8.64□□□□□ -1.03
PBX1-211ENST00000498497 ECSCRQ19T08 205 aa8.64□□□□□ -1.03
PBX1-211ENST00000498497 VMO1Q7Z5L0 202 aa8.64□□□□□ -1.03
PBX1-211ENST00000498497 RNASE6Q93091 150 aaKnown RBP8.64□□□□□ -1.03
PBX1-211ENST00000498497 PRIMA1Q86XR5 153 aa8.63□□□□□ -1.03
PBX1-211ENST00000498497 GPHB5Q86YW7 130 aa8.63□□□□□ -1.03
PBX1-211ENST00000498497 PIK3CD-AS1Q5SR53 167 aa8.63□□□□□ -1.03
PBX1-211ENST00000498497 IGHV1-3A0A0C4DH29 117 aa8.63□□□□□ -1.03
PBX1-211ENST00000498497 C5orf67F2Z3F1 127 aa8.63□□□□□ -1.03
PBX1-211ENST00000498497 LY6LH3BQJ8 138 aa8.63□□□□□ -1.03
PBX1-211ENST00000498497 NDUFB3O43676 98 aa8.63□□□□□ -1.03
PBX1-211ENST00000498497 FANCD2OSQ96PS1 177 aa8.63□□□□□ -1.03
PBX1-211ENST00000498497 LITAFQ99732 161 aa8.63□□□□□ -1.03
PBX1-211ENST00000498497 CXCL5P42830 114 aa8.62□□□□□ -1.03
PBX1-211ENST00000498497 XCL1P47992 114 aa8.62□□□□□ -1.03
PBX1-211ENST00000498497 MIAQ16674 131 aa8.62□□□□□ -1.03
PBX1-211ENST00000498497 DEFB121Q5J5C9 76 aa8.62□□□□□ -1.03
PBX1-211ENST00000498497 XCL2Q9UBD3 114 aa8.62□□□□□ -1.03
PBX1-211ENST00000498497 CRYBG3Q68DQ2 2970 aa8.62□□□□□ -1.03
PBX1-211ENST00000498497 A0A087WZ39 114 aa8.62□□□□□ -1.03
PBX1-211ENST00000498497 TRAV21A0A0B4J279 112 aa8.62□□□□□ -1.03
PBX1-211ENST00000498497 ZFHX2Q9C0A1 2572 aaPredicted RBP8.62□□□□□ -1.03
PBX1-211ENST00000498497 C9orf106Q8NAJ2 232 aa8.61□□□□□ -1.03
PBX1-211ENST00000498497 KNCNA6PVL3 124 aa8.61□□□□□ -1.03
PBX1-211ENST00000498497 F8WEM9 126 aa8.61□□□□□ -1.03
PBX1-211ENST00000498497 CLEC19AQ6UXS0 136 aa8.61□□□□□ -1.03
PBX1-211ENST00000498497 TMEM105Q8N8V8 129 aa8.61□□□□□ -1.03
PBX1-211ENST00000498497 VCYO14598 125 aa8.6□□□□□ -1.03
PBX1-211ENST00000498497 SLC25A15Q9Y619 301 aa8.6□□□□□ -1.03
PBX1-211ENST00000498497 TRAV12-2A0A075B6T6 113 aa8.6□□□□□ -1.03
PBX1-211ENST00000498497 PATE3B3GLJ2 98 aa8.6□□□□□ -1.03
PBX1-211ENST00000498497 COX7A2LO14548 114 aa8.6□□□□□ -1.03
PBX1-211ENST00000498497 LPAL2Q16609 132 aa8.6□□□□□ -1.03
PBX1-211ENST00000498497 INAFM2P0DMQ5 153 aa8.59□□□□□ -1.03
PBX1-211ENST00000498497 IGHV1-8P0DP01 117 aa8.59□□□□□ -1.03
PBX1-211ENST00000498497 PSMG3-AS1Q96PY0 264 aa8.59□□□□□ -1.03
PBX1-211ENST00000498497 IGHV3-38A0A0C4DH36 116 aa8.59□□□□□ -1.03
PBX1-211ENST00000498497 IGHG2P01859 326 aa8.59□□□□□ -1.03
PBX1-211ENST00000498497 CTSGP08311 255 aa8.59□□□□□ -1.03
PBX1-211ENST00000498497 C22orf34Q6ZV56 151 aa8.59□□□□□ -1.03
PBX1-211ENST00000498497 U3KQE9 123 aa8.59□□□□□ -1.03
PBX1-211ENST00000498497 TMEM141Q96I45 108 aa8.58□□□□□ -1.04
PBX1-211ENST00000498497 Q9H8V8 135 aa8.58□□□□□ -1.04
PBX1-211ENST00000498497 PIEZO1Q92508 2521 aa8.58□□□□□ -1.04
PBX1-211ENST00000498497 SNRPD3P62318 126 aaKnown RBP8.58□□□□□ -1.04
PBX1-211ENST00000498497 SETD2Q9BYW2 2564 aaPredicted RBP8.58□□□□□ -1.04
PBX1-211ENST00000498497 A0A087WYN8 130 aa8.58□□□□□ -1.04
PBX1-211ENST00000498497 F8W735 103 aaPredicted RBP8.58□□□□□ -1.04
PBX1-211ENST00000498497 K7ENP7 123 aa8.58□□□□□ -1.04
PBX1-211ENST00000498497 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.57□□□□□ -1.04
PBX1-211ENST00000498497 LY6G6EA0A0G2JKS1 128 aa8.57□□□□□ -1.04
PBX1-211ENST00000498497 IGKV2-29A2NJV5 120 aaPredicted RBP8.57□□□□□ -1.04
PBX1-211ENST00000498497 CD59P13987 128 aa8.57□□□□□ -1.04
PBX1-211ENST00000498497 LYPD5Q6UWN5 251 aa8.57□□□□□ -1.04
PBX1-211ENST00000498497 C22orf24Q9Y442 160 aa8.57□□□□□ -1.04
PBX1-211ENST00000498497 U3KQA8 63 aa8.57□□□□□ -1.04
PBX1-211ENST00000498497 IGLV4-3A0A075B6K6 122 aa8.57□□□□□ -1.04
PBX1-211ENST00000498497 C15orf32Q32M92 178 aa8.57□□□□□ -1.04
PBX1-211ENST00000498497 C20orf173Q96LM9 149 aa8.57□□□□□ -1.04
PBX1-211ENST00000498497 IGHV1OR15-1A0A075B7D0 117 aa8.56□□□□□ -1.04
PBX1-211ENST00000498497 TRBV27A0A0K0K1C4 114 aa8.56□□□□□ -1.04
PBX1-211ENST00000498497 TIMM17AQ99595 171 aa8.56□□□□□ -1.04
PBX1-211ENST00000498497 C16orf95Q9H693 158 aa8.56□□□□□ -1.04
PBX1-211ENST00000498497 FAM229BQ4G0N7 80 aa8.56□□□□□ -1.04
PBX1-211ENST00000498497 Q9UF83 564 aa8.56□□□□□ -1.04
PBX1-211ENST00000498497 SERP1Q9Y6X1 66 aa8.56□□□□□ -1.04
PBX1-211ENST00000498497 LECT2O14960 151 aa8.56□□□□□ -1.04
PBX1-211ENST00000498497 TRBV7-6A0A0J9YX20 115 aa8.55□□□□□ -1.04
PBX1-211ENST00000498497 NBR2O15453 112 aa8.55□□□□□ -1.04
PBX1-211ENST00000498497 RNASE3P12724 160 aaKnown RBP8.55□□□□□ -1.04
PBX1-211ENST00000498497 PROK1P58294 105 aa8.55□□□□□ -1.04
PBX1-211ENST00000498497 CDKN2A-AS1Q9UH64 79 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms