RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 TSHBP01222 138 aa13.56□□□□□ -0.24
SCAMP3-209ENST00000497470 ESDP10768 282 aa13.56□□□□□ -0.24
SCAMP3-209ENST00000497470 SMAGPQ0VAQ4 97 aa13.55□□□□□ -0.24
SCAMP3-209ENST00000497470 IGHV3-38A0A0C4DH36 116 aa13.54□□□□□ -0.24
SCAMP3-209ENST00000497470 FCER1GP30273 86 aa13.54□□□□□ -0.24
SCAMP3-209ENST00000497470 ORMDL2Q53FV1 153 aa13.54□□□□□ -0.24
SCAMP3-209ENST00000497470 PRSS3P2Q8NHM4 247 aa13.54□□□□□ -0.24
SCAMP3-209ENST00000497470 TMEM18Q96B42 140 aa13.54□□□□□ -0.24
SCAMP3-209ENST00000497470 AMTP48728 403 aa13.53□□□□□ -0.24
SCAMP3-209ENST00000497470 TMEM243Q9BU79 118 aa13.53□□□□□ -0.24
SCAMP3-209ENST00000497470 A0A1B0GUV1 79 aa13.52□□□□□ -0.25
SCAMP3-209ENST00000497470 DNAH10OSP0CZ25 163 aa13.52□□□□□ -0.25
SCAMP3-209ENST00000497470 LINC00614P0C842 121 aa13.51□□□□□ -0.25
SCAMP3-209ENST00000497470 IFI27P40305 119 aaPredicted RBP13.51□□□□□ -0.25
SCAMP3-209ENST00000497470 LAGE3Q14657 143 aa13.51□□□□□ -0.25
SCAMP3-209ENST00000497470 UBE2DNLQ8IWF7 75 aa13.51□□□□□ -0.25
SCAMP3-209ENST00000497470 CHCHD1Q96BP2 118 aaKnown RBP13.51□□□□□ -0.25
SCAMP3-209ENST00000497470 TIMM21Q9BVV7 248 aa13.51□□□□□ -0.25
SCAMP3-209ENST00000497470 CSDC2Q9Y534 153 aaKnown RBP13.51□□□□□ -0.25
SCAMP3-209ENST00000497470 CSMD3Q7Z407 3707 aa13.51□□□□□ -0.25
SCAMP3-209ENST00000497470 LOC389332A0A1B0GUA5 103 aa13.5□□□□□ -0.25
SCAMP3-209ENST00000497470 C1orf196B1AJZ1 125 aa13.5□□□□□ -0.25
SCAMP3-209ENST00000497470 SIVA1O15304 175 aa13.5□□□□□ -0.25
SCAMP3-209ENST00000497470 NPSP0C0P6 89 aa13.5□□□□□ -0.25
SCAMP3-209ENST00000497470 ZNF25P17030 456 aaPredicted RBP13.5□□□□□ -0.25
SCAMP3-209ENST00000497470 LINC01556Q5JQF7 62 aa13.5□□□□□ -0.25
SCAMP3-209ENST00000497470 MRPL52Q86TS9 123 aaKnown RBP13.5□□□□□ -0.25
SCAMP3-209ENST00000497470 NIT1Q86X76 327 aa13.5□□□□□ -0.25
SCAMP3-209ENST00000497470 C20orf203Q8NBC4 194 aa13.5□□□□□ -0.25
SCAMP3-209ENST00000497470 LINC00476Q8WZB0 136 aa13.5□□□□□ -0.25
SCAMP3-209ENST00000497470 AP5S1Q9NUS5 200 aa13.5□□□□□ -0.25
SCAMP3-209ENST00000497470 BTF3P20290 206 aaKnown RBP13.49□□□□□ -0.25
SCAMP3-209ENST00000497470 FA2HQ7L5A8 372 aa13.49□□□□□ -0.25
SCAMP3-209ENST00000497470 Q9H8V8 135 aa13.49□□□□□ -0.25
SCAMP3-209ENST00000497470 DYNC2H1Q8NCM8 4307 aaKnown RBP13.48□□□□□ -0.25
SCAMP3-209ENST00000497470 HIST1H2BKO60814 126 aa13.48□□□□□ -0.25
SCAMP3-209ENST00000497470 HIST1H2BJP06899 126 aa13.48□□□□□ -0.25
SCAMP3-209ENST00000497470 HIST1H2BOP23527 126 aa13.48□□□□□ -0.25
SCAMP3-209ENST00000497470 HIST1H2BBP33778 126 aa13.48□□□□□ -0.25
SCAMP3-209ENST00000497470 HIST1H2BDP58876 126 aa13.48□□□□□ -0.25
SCAMP3-209ENST00000497470 HIST1H2BCP62807 126 aa13.48□□□□□ -0.25
SCAMP3-209ENST00000497470 HIST2H2BEQ16778 126 aa13.48□□□□□ -0.25
SCAMP3-209ENST00000497470 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.48□□□□□ -0.25
SCAMP3-209ENST00000497470 HIST1H2BHQ93079 126 aa13.48□□□□□ -0.25
SCAMP3-209ENST00000497470 HIST1H2BNQ99877 126 aa13.48□□□□□ -0.25
SCAMP3-209ENST00000497470 HIST1H2BMQ99879 126 aa13.48□□□□□ -0.25
SCAMP3-209ENST00000497470 C10orf126Q8N4M7 172 aa13.47□□□□□ -0.25
SCAMP3-209ENST00000497470 CHCHD5Q9BSY4 110 aa13.47□□□□□ -0.25
SCAMP3-209ENST00000497470 TRAV9-2A0A087WT02 112 aa13.46□□□□□ -0.25
SCAMP3-209ENST00000497470 UBE2L6O14933 153 aa13.46□□□□□ -0.25
SCAMP3-209ENST00000497470 COA6Q5JTJ3 125 aaKnown RBP13.46□□□□□ -0.25
SCAMP3-209ENST00000497470 PYGO1Q9Y3Y4 419 aa13.46□□□□□ -0.25
SCAMP3-209ENST00000497470 TTC32Q5I0X7 151 aa13.45□□□□□ -0.26
SCAMP3-209ENST00000497470 BAGE3Q86Y29 109 aa13.45□□□□□ -0.26
SCAMP3-209ENST00000497470 WFDC10BQ8IUB3 73 aa13.45□□□□□ -0.26
SCAMP3-209ENST00000497470 URB1-AS1Q96HZ7 61 aa13.45□□□□□ -0.26
SCAMP3-209ENST00000497470 SPANXA1Q9NS26 97 aa13.45□□□□□ -0.26
SCAMP3-209ENST00000497470 TENM2Q9NT68 2774 aa13.44□□□□□ -0.26
SCAMP3-209ENST00000497470 A0A087WX48 190 aa13.44□□□□□ -0.26
SCAMP3-209ENST00000497470 CYSLTR1Q9Y271 337 aa13.44□□□□□ -0.26
SCAMP3-209ENST00000497470 LCE6AA0A183 80 aa13.42□□□□□ -0.26
SCAMP3-209ENST00000497470 FGF6P10767 208 aa13.42□□□□□ -0.26
SCAMP3-209ENST00000497470 MRPS36P82909 103 aaKnown RBP13.42□□□□□ -0.26
SCAMP3-209ENST00000497470 TOMM6Q96B49 74 aa13.42□□□□□ -0.26
SCAMP3-209ENST00000497470 STARD9Q9P2P6 4700 aa13.42□□□□□ -0.26
SCAMP3-209ENST00000497470 RBX1P62877 108 aa13.41□□□□□ -0.26
SCAMP3-209ENST00000497470 C2orf66Q6UXQ4 117 aa13.41□□□□□ -0.26
SCAMP3-209ENST00000497470 UBE2D4Q9Y2X8 147 aa13.41□□□□□ -0.26
SCAMP3-209ENST00000497470 TMEM262E9PQX1 116 aa13.4□□□□□ -0.26
SCAMP3-209ENST00000497470 AMMECR1LQ6DCA0 310 aa13.4□□□□□ -0.26
SCAMP3-209ENST00000497470 TMEM101Q96IK0 257 aa13.4□□□□□ -0.26
SCAMP3-209ENST00000497470 TIMM17AQ99595 171 aa13.4□□□□□ -0.26
SCAMP3-209ENST00000497470 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.39□□□□□ -0.27
SCAMP3-209ENST00000497470 IGKV2-29A2NJV5 120 aaPredicted RBP13.39□□□□□ -0.27
SCAMP3-209ENST00000497470 HSBP1O75506 76 aa13.39□□□□□ -0.27
SCAMP3-209ENST00000497470 LY6G6CO95867 125 aa13.39□□□□□ -0.27
SCAMP3-209ENST00000497470 HBDP02042 147 aa13.39□□□□□ -0.27
SCAMP3-209ENST00000497470 GAGE6Q13070 117 aa13.39□□□□□ -0.27
SCAMP3-209ENST00000497470 PAPPA-AS1Q5QFB9 102 aa13.39□□□□□ -0.27
SCAMP3-209ENST00000497470 ERASQ7Z444 233 aa13.39□□□□□ -0.27
SCAMP3-209ENST00000497470 NBDYA0A0U1RRE5 68 aa13.38□□□□□ -0.27
SCAMP3-209ENST00000497470 IBA57-AS1B1ANH7 110 aa13.38□□□□□ -0.27
SCAMP3-209ENST00000497470 MPV17L2Q567V2 206 aa13.38□□□□□ -0.27
SCAMP3-209ENST00000497470 RNASEKQ6P5S7 137 aaKnown RBP13.38□□□□□ -0.27
SCAMP3-209ENST00000497470 PACRGQ96M98 296 aaPredicted RBP13.38□□□□□ -0.27
SCAMP3-209ENST00000497470 PRR34Q9NV39 138 aa13.38□□□□□ -0.27
SCAMP3-209ENST00000497470 IGIPA6NJ69 53 aa13.37□□□□□ -0.27
SCAMP3-209ENST00000497470 CCL25O15444 150 aa13.37□□□□□ -0.27
SCAMP3-209ENST00000497470 SERF1AO75920 110 aa13.37□□□□□ -0.27
SCAMP3-209ENST00000497470 LINC00310P59036 64 aa13.37□□□□□ -0.27
SCAMP3-209ENST00000497470 DGAT2L7PQ6IED9 249 aa13.37□□□□□ -0.27
SCAMP3-209ENST00000497470 Q6ZR54 194 aa13.37□□□□□ -0.27
SCAMP3-209ENST00000497470 OR5A1Q8NGJ0 315 aa13.37□□□□□ -0.27
SCAMP3-209ENST00000497470 TMEM141Q96I45 108 aa13.37□□□□□ -0.27
SCAMP3-209ENST00000497470 CDC42SE2Q9NRR3 84 aa13.37□□□□□ -0.27
SCAMP3-209ENST00000497470 A0A096LNJ9 63 aa13.36□□□□□ -0.27
SCAMP3-209ENST00000497470 DEFB104AQ8WTQ1 72 aa13.36□□□□□ -0.27
SCAMP3-209ENST00000497470 TRAV8-3A0A0A6YYJ7 113 aa13.35□□□□□ -0.27
SCAMP3-209ENST00000497470 RPL39P62891 51 aaKnown RBP13.35□□□□□ -0.27
SCAMP3-209ENST00000497470 PDZD11Q5EBL8 140 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms