RNA–Protein interactions for RNA: ENST00000497106.5

USP54-215, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,773 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-215ENST00000497106 C20orf203Q8NBC4 194 aa6.06□□□□□ -1.44
USP54-215ENST00000497106 POLR2KP53803 58 aaKnown RBP6.06□□□□□ -1.44
USP54-215ENST00000497106 BOD1L1Q8NFC6 3051 aa6.06□□□□□ -1.44
USP54-215ENST00000497106 FLNAP21333 2647 aaKnown RBP6.06□□□□□ -1.44
USP54-215ENST00000497106 TAX1BP3O14907 124 aa6.06□□□□□ -1.44
USP54-215ENST00000497106 HSD52Q0P140 79 aa6.06□□□□□ -1.44
USP54-215ENST00000497106 NEXN-AS1Q8NBZ9 246 aa6.06□□□□□ -1.44
USP54-215ENST00000497106 LINC01546A6NGU7 62 aa6.05□□□□□ -1.44
USP54-215ENST00000497106 GYPEP15421 78 aa6.05□□□□□ -1.44
USP54-215ENST00000497106 KIF25-AS1Q9Y6Z4 181 aa6.05□□□□□ -1.44
USP54-215ENST00000497106 RBMY1A1P0DJD3 496 aaKnown RBP6.05□□□□□ -1.44
USP54-215ENST00000497106 RBMY1CP0DJD4 496 aa6.05□□□□□ -1.44
USP54-215ENST00000497106 RBMY1FQ15415 496 aaKnown RBP6.05□□□□□ -1.44
USP54-215ENST00000497106 NEGR1Q7Z3B1 354 aa6.05□□□□□ -1.44
USP54-215ENST00000497106 ACANP16112 2415 aa6.05□□□□□ -1.44
USP54-215ENST00000497106 C5orf47Q569G3 176 aa6.05□□□□□ -1.44
USP54-215ENST00000497106 IL17DQ8TAD2 202 aa6.05□□□□□ -1.44
USP54-215ENST00000497106 CELSR3Q9NYQ7 3312 aa6.05□□□□□ -1.44
USP54-215ENST00000497106 FLNCQ14315 2725 aa6.05□□□□□ -1.44
USP54-215ENST00000497106 CRPP02741 224 aa6.05□□□□□ -1.44
USP54-215ENST00000497106 GAGE6Q13070 117 aa6.05□□□□□ -1.44
USP54-215ENST00000497106 CIRBPQ14011 172 aaKnown RBP6.05□□□□□ -1.44
USP54-215ENST00000497106 C19orf73Q9NVV2 129 aa6.05□□□□□ -1.44
USP54-215ENST00000497106 ITPR3Q14573 2671 aa6.04□□□□□ -1.44
USP54-215ENST00000497106 A6NDN8 102 aa6.04□□□□□ -1.44
USP54-215ENST00000497106 A8MZ25 164 aa6.04□□□□□ -1.44
USP54-215ENST00000497106 SIVA1O15304 175 aa6.04□□□□□ -1.44
USP54-215ENST00000497106 SS18Q15532 418 aa6.04□□□□□ -1.44
USP54-215ENST00000497106 GAGE12HA6NDE8 117 aa6.04□□□□□ -1.44
USP54-215ENST00000497106 TIMM21Q9BVV7 248 aa6.04□□□□□ -1.44
USP54-215ENST00000497106 PYGO1Q9Y3Y4 419 aa6.04□□□□□ -1.44
USP54-215ENST00000497106 HERVK_113P63121 156 aa6.04□□□□□ -1.44
USP54-215ENST00000497106 DCHS1Q96JQ0 3298 aa6.04□□□□□ -1.44
USP54-215ENST00000497106 IGHV3-38A0A0C4DH36 116 aa6.03□□□□□ -1.44
USP54-215ENST00000497106 CHAC1Q9BUX1 264 aa6.03□□□□□ -1.44
USP54-215ENST00000497106 EGFEM1PQ0D2K5 195 aa6.03□□□□□ -1.44
USP54-215ENST00000497106 SLC25A29Q8N8R3 303 aa6.03□□□□□ -1.44
USP54-215ENST00000497106 PRSS29PA6NIE9 313 aa6.02□□□□□ -1.45
USP54-215ENST00000497106 ZC2HC1BQ5TFG8 222 aa6.02□□□□□ -1.45
USP54-215ENST00000497106 C11orf45Q8TAV5 145 aa6.02□□□□□ -1.45
USP54-215ENST00000497106 SRSF9Q13242 221 aaKnown RBP eCLIP6.02□□□□□ -1.45
USP54-215ENST00000497106 MRPL35Q9NZE8 188 aaKnown RBP6.02□□□□□ -1.45
USP54-215ENST00000497106 F8P00451 2351 aa6.02□□□□□ -1.45
USP54-215ENST00000497106 PRSS2P07478 247 aa6.02□□□□□ -1.45
USP54-215ENST00000497106 MRAPQ8TCY5 172 aa6.02□□□□□ -1.45
USP54-215ENST00000497106 RPL24P83731 157 aaKnown RBP6.02□□□□□ -1.45
USP54-215ENST00000497106 SMIM20Q8N5G0 67 aa6.02□□□□□ -1.45
USP54-215ENST00000497106 BAALCQ8WXS3 180 aa6.02□□□□□ -1.45
USP54-215ENST00000497106 DKK2Q9UBU2 259 aa6.02□□□□□ -1.45
USP54-215ENST00000497106 K7EP34 96 aa6.01□□□□□ -1.45
USP54-215ENST00000497106 TSHBP01222 138 aa6.01□□□□□ -1.45
USP54-215ENST00000497106 LINC00315P59091 139 aa6.01□□□□□ -1.45
USP54-215ENST00000497106 UBE2D3P61077 147 aa6.01□□□□□ -1.45
USP54-215ENST00000497106 UBE2D2P62837 147 aa6.01□□□□□ -1.45
USP54-215ENST00000497106 LYRM7Q5U5X0 104 aa6.01□□□□□ -1.45
USP54-215ENST00000497106 C11orf68Q9H3H3 251 aaKnown RBP6.01□□□□□ -1.45
USP54-215ENST00000497106 MTORP42345 2549 aa6.01□□□□□ -1.45
USP54-215ENST00000497106 IGLV2-18A0A075B6J9 118 aa6.01□□□□□ -1.45
USP54-215ENST00000497106 LINC00310P59036 64 aa6.01□□□□□ -1.45
USP54-215ENST00000497106 ERG28Q9UKR5 140 aa6.01□□□□□ -1.45
USP54-215ENST00000497106 SFTA2Q6UW10 78 aa6.01□□□□□ -1.45
USP54-215ENST00000497106 CSNK1G2-AS1Q8NCQ2 148 aa6.01□□□□□ -1.45
USP54-215ENST00000497106 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6□□□□□ -1.45
USP54-215ENST00000497106 hDV102S1A0JD36 115 aa6□□□□□ -1.45
USP54-215ENST00000497106 IGKV2-29A2NJV5 120 aaPredicted RBP6□□□□□ -1.45
USP54-215ENST00000497106 APOMO95445 188 aa6□□□□□ -1.45
USP54-215ENST00000497106 FGF6P10767 208 aa6□□□□□ -1.45
USP54-215ENST00000497106 MRPS36P82909 103 aaKnown RBP6□□□□□ -1.45
USP54-215ENST00000497106 PRIMA1Q86XR5 153 aa6□□□□□ -1.45
USP54-215ENST00000497106 URB1-AS1Q96HZ7 61 aa6□□□□□ -1.45
USP54-215ENST00000497106 KALRNO60229 2985 aa6□□□□□ -1.45
USP54-215ENST00000497106 BVES-AS1Q5T3Y7 98 aa6□□□□□ -1.45
USP54-215ENST00000497106 C15orf53Q8NAA6 179 aa6□□□□□ -1.45
USP54-215ENST00000497106 RMI2Q96E14 147 aa6□□□□□ -1.45
USP54-215ENST00000497106 TRAV10A0A0B4J240 114 aa6□□□□□ -1.45
USP54-215ENST00000497106 A0A0J9YY99 117 aa6□□□□□ -1.45
USP54-215ENST00000497106 COX8AP10176 69 aa6□□□□□ -1.45
USP54-215ENST00000497106 X6R8D5 127 aa6□□□□□ -1.45
USP54-215ENST00000497106 HRNRQ86YZ3 2850 aaPredicted RBP6□□□□□ -1.45
USP54-215ENST00000497106 WNK1Q9H4A3 2382 aa5.99□□□□□ -1.45
USP54-215ENST00000497106 IGKV3OR2-268A0A0C4DH90 116 aa5.99□□□□□ -1.45
USP54-215ENST00000497106 SAMD5Q5TGI4 173 aa5.99□□□□□ -1.45
USP54-215ENST00000497106 UFSP1Q6NVU6 142 aa5.99□□□□□ -1.45
USP54-215ENST00000497106 LINC00173Q6ZV60 143 aa5.99□□□□□ -1.45
USP54-215ENST00000497106 HIST1H4GQ99525 98 aa5.99□□□□□ -1.45
USP54-215ENST00000497106 C11orf86A6NJI1 115 aa5.99□□□□□ -1.45
USP54-215ENST00000497106 ZNF815PA8K554 130 aa5.99□□□□□ -1.45
USP54-215ENST00000497106 MALP21145 153 aa5.99□□□□□ -1.45
USP54-215ENST00000497106 ANAPC13Q9BS18 74 aa5.99□□□□□ -1.45
USP54-215ENST00000497106 P0DMU3 169 aa5.99□□□□□ -1.45
USP54-215ENST00000497106 FAM231AP0DMU4 169 aa5.99□□□□□ -1.45
USP54-215ENST00000497106 FAM231CP0DMU5 169 aa5.99□□□□□ -1.45
USP54-215ENST00000497106 FHL2Q14192 279 aa5.99□□□□□ -1.45
USP54-215ENST00000497106 TRBV6-8A0A0A6YYG3 113 aa5.99□□□□□ -1.45
USP54-215ENST00000497106 MYMXA0A1B0GTQ4 84 aa5.99□□□□□ -1.45
USP54-215ENST00000497106 MPV17L2Q567V2 206 aa5.99□□□□□ -1.45
USP54-215ENST00000497106 UBE2DNLQ8IWF7 75 aa5.99□□□□□ -1.45
USP54-215ENST00000497106 DEFB4AO15263 64 aa5.98□□□□□ -1.45
USP54-215ENST00000497106 RPL39P62891 51 aaKnown RBP5.98□□□□□ -1.45
USP54-215ENST00000497106 TRAV13-1A0A0B4J241 112 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms